Life Sciences Commons^™

Impact Of Vehicular Traffic On Herpetofaunal Mortality In A Savannah Forest, Eastern Sri Lanka, Sujan Henkanaththegedara, Suranjan Karunarathna, A. A. Thasun Amarasinghe

Sujan Henkanaththegedara

Photo-Identification Methods Reveal Seasonal And Long-Term Site-Fidelity Of Risso’S Dolphins (Grampus Griseus) In Shallow Waters (Cardigan Bay, Wales), Marijke N. De Boer, Josephine Clark, Mardik F. Leopold, Mark P. Simmonds, Peter J.H. Reijnders

Ecology Collection

A photo-identification study on Risso’s dolphins was carried out off Bardsey Island in Wales (July to September, 1997-2007). Their local abundance was estimated using two different analytical techniques: 1) mark-recapture of well-marked dolphins using a “closed-population” model; and 2) a census technique based on the total number of iden-tified individual dolphins sighted over the study period. The mark-recapture estimates of 121 (left sides; 64 - 178, 95% CI; CV 0.24) and 145 dolphins (right sides; 78 - 213, 95% CI; CV 0.24) closely matched the census technique estimates (population size of 90 - 151). It was found that the dolphins …

The Imperative Of Conserving California's Foothill Oak Woodlands, Lauren Phillips

Social Sciences

No abstract provided.

Producers Willingness To Adopt A Prescribed Grazing System East Of The 100th Meridian, Caroline Elizabeth Holt

Masters Theses

With the climate change concerns facing the United States, the contributions of the beef industry to greenhouse gasses are difficult to overlook. The agriculture industry is estimated to be the largest producer of methane emissions in the United States, and within agriculture, livestock are the largest contributor with cattle producing 73 percent of the methane emissions from all livestock (Johnson and Johnson 1995).

This thesis focuses on factors influencing beef cattle producers’ east of the 100th meridian interest in adopting prescribed grazing; including how a government cost share system could enhance adoption. Information was obtained for the study through a …

The Envenoming Pandemic And The Misguided Views Of Snakes: Developing Sustainable Relationships Between Native Poisonous Snakes Of India And The Citizens Of Maharashtra Through The Use Of The Irula Model., Destiny Villanueva

Animal Science

Due to its vast population and general negative consensus regarding snakes, India is notorious for having more snakebite incidents than any other country. Snakes are simultaneously revered and feared in Indian religion and culture. This stigma is perpetuated through propaganda, family beliefs, and innate fears of snakes.These stigmas are more pronounced within rural areas, such as the region of Mahad within the state of Maharshtra. Envenoming is endemic in these areas, and others like them. The World Health Organization identified envenoming as one of the most neglected tropical diseases of the 21st century (Nature India, 2013). Additionally, both nonvenomous and …

Accounting For False Positive Detection Error Induced By Transient Individuals, Chris Sutherland, D Elston, X. Lambin

Environmental Conservation Faculty Publication Series

Context. In metapopulations, colonisation is the result of dispersal from neighbouring occupied patches, typically juveniles dispersing from natal to breeding sites. When occupancy dynamics are dispersal driven, occupancy should refer to the presence of established, breeding populations. The detection of transient individuals at sites that are, by definition, unoccupied (i.e. false positive detections), may result in misleading conclusions about metapopulation dynamics. Until recently, the issue of false positives has been considered negligible and current efforts to account for such error have beenrestricted to the context of species misidentification. However, the detection of transient individuals visiting multiple siteswhile dispersing is a …

Accounting For False Positive Detection Error Induced By Transient Individuals, Chris Sutherland, D Elston, X. Lambin

Chris Sutherland

High Variance In Reproductive Success Generates A False Signature Of A Genetic Bottleneck In Populations Of Constant Size: A Simulation Study, Sean M. Hoban, Massimo Mezzavilla, Oscar E. Gaggiotti, Andrea Benazzo, Cock Van Oosterhout, Giorgio Bertorelle

Faculty Publications and Other Works -- General Biology

Background

Demographic bottlenecks can severely reduce the genetic variation of a population or a species. Establishing whether low genetic variation is caused by a bottleneck or a constantly low effective number of individuals is important to understand a species’ ecology and evolution, and it has implications for conservation management. Recent studies have evaluated the power of several statistical methods developed to identify bottlenecks. However, the false positive rate, i.e. the rate with which a bottleneck signal is misidentified in demographically stable populations, has received little attention. We analyse this type of error (type I) in forward computer simulations of stable …

A Framework To Evaluate Wildlife Feeding In Research, Wildlife Management, Tourism And Recreation, Sara Dubois, David Fraser

Wildlife Population Management Collection

Feeding of wildlife occurs in the context of research, wildlife management, tourism and in opportunistic ways. A review of examples shows that although feeding is often motivated by good intentions, it can lead to problems of public safety and conservation and be detrimental to the welfare of the animals. Examples from British Columbia illustrate the problems (nuisance animal activity, public safety risk) and consequences (culling, translocation) that often arise from uncontrolled feeding. Three features of wildlife feeding can be distinguished: the feasibility of control, the effects on conservation and the effects on animal welfare. An evaluative framework incorporating these three …

Wildlands Conservancy/Connick Ranch Research, Susie Van Kirk

Susie Van Kirk Papers

Susie Van Kirks research notes on the Wildlands Conservancy and Connick Ranch. Includes newspaper references, interviews, as well as deed, survey and patent information.

Pelagic Larval Duration Links Life History Traits And Species Persistence In Darters (Percidae: Etheostomatinae), Morgan Jessica Douglas

Masters Theses

Pelagic larval duration (PLD) likely influences evolutionary processes including dispersal, genetic connectivity, and extinction in aquatic organisms. PLD has been well studied in marine systems, but very few freshwater species have been studied. Darters are a diverse group of freshwater North American fish with available information on the length of this stage from propagation efforts. There is surprising variation in the length of this stage ranging from 0 to 60 days. By compiling information from Conservations Fisheries, Inc. (Knoxville, TN) and the literature, we were able to make comparisons between the PLD of 23 species and other life history characteristics. …

Personhood And Cloning: Modern Applications And Ethics Of Stem Cell And Cloning Technology, Sariah Cottrell Mccarrey

Theses and Dissertations

Within many communities and religions, including the LDS community, there is some controversy surrounding the use of stem cells – particularly embryonic stem cells (ESC). Much of this controversy arises from confusion and misconceptions about what stem cells actually are, where they come from , and when life begins. The theology of the Church of Jesus Christ of Latter-day Saints has interesting implications for the last of these considerations, and it becomes less a question of “when does life begin” and more an exploration of “when does personhood begin” or “when does the spirit enter the body.” With no official …

Genetic Structure Of The Florida Key Tree Cactus, Pilosocereus Robinii, Using Restriction Site Associated Dna (Rad) Markers, Tonya D. Fotinos

FIU Electronic Theses and Dissertations

Rare plant conservation efforts must utilize current genetic methods to ensure the evolutionary potential of populations is preserved. One such effort involves the Key Tree Cactus, Pilosocereus robinii, which is an endangered columnar cactus native to the Florida Keys. The populations have precipitously declined over the past decade because of habitat loss and increasing soil salinity from rising sea levels and storm surge. Next-generation DNA sequencing was used to assess the genetic structure of the populations. Twenty individuals representative of both wild and extirpated cacti were chosen for Restriction Site Associated DNA (RAD) analysis. Samples processed using the HindIII …

Architecture And Conservation Of The Bacterial Dna Replication Machinery, An Underexploited Drug Target, Andrew Robinson, Rebecca J. Causer, Nicholas E. Dixon

Professor Nick E Dixon

"New antibiotics with novel modes of action are required to combat the growing threat posed by multi-drug resistant bacteria. Over the last decade, genome sequencing and other high-throughput techniques have provided tremendous insight into the molecular processes underlying cellular functions in a wide range of bacterial species. We can now use these data to assess the degree of conservation of certain aspects of bacterial physiology, to help choose the best cellular targets for development of new broad-spectrum antibacterials. DNA replication is a conserved and essential process, and the large number of proteins that interact to replicate DNA in bacteria are …

The Subterranean Fauna Of A Biodiversity Hotspot Region - Portugal: An Overview And Its Conservation, Ana Sofia P.S. Reboleira, Paulo A.V. Borges, Fernando Gonçalves, Artur R.M. Serrano, Pedro Oromí

Ana Sofia P.S. Reboleira

An overview of the obligate hypogean fauna in Portugal (including Azores and Madeira archipelagos) is provided, with a list of obligated cave-dwelling species and subspecies, and a general perspective about its conservation. All the available literature on subterranean Biology of Portugal since the first written record in 1870 until today has been revised. A total of 43 troglobiont and 67 stygobiont species and subspecies from 12 orders have been described so far in these areas, included in the so-called Mediterranean hotspot of biodiversity. The subterranean fauna in Portugal has been considered moderately poor with some endemic relicts and it remains …

Probiotic Bioaugmentation Of An Anti-Bd Bacteria, Janthinobacterium Lividum, On The Amphibian, Notophthalmus Viridescens: Transmission Efficacy And Persistence Of The Probiotic On The Host And Non-Target Effects Of Probiotic Addition On Ecosystem Components, Molly Bletz

Masters Theses, 2010-2019

Amphibians worldwide are threatened by the fungal disease chytridiomycosis, caused by the skin pathogen Batrachochytrium dendrobatidis. Mutualistic skin bacteria are a critical element in amphibians’ defenses against chytridiomycosis. Probiotic bioaugmentation of beneficial, anti-Bd bacteria on amphibians is a potential conservation strategies. Outdoor experimental ponds were used to investigate transmission efficacy and persistence of the anti-Bd bacteria, Janthinobacterium lividum, on the amphibian, Notophthalmus viridescens. More specifically, this research investigated whether a short-term individual bath, environmental bioaugmentation, or both are necessary to afford transmission and persistence of J. lividum on N. viridescens. Additionally, this research investigated the effectiveness of these different probiotic …

Modeling Habitat Associations For The Common Loon (Gavia Immer) At Multiple Scales In Northeastern North America, Anne Kuhn, Jane Copeland, John Cooley, Harry Vogel, Kate Taylor, Diane Nacci, Peter V. August

Peter August

Common Loon (Gavia immer) is considered an emblematic and ecologically important example of aquatic-dependent wildlife in North America. The northern breeding range of Common Loon has contracted over the last century as a result of habitat degradation from human disturbance and lakeshore development. We focused on the state of New Hampshire, USA, where a long-term monitoring program conducted by the Loon Preservation Committee has been collecting biological data on Common Loon since 1976. The Common Loon population in New Hampshire is distributed throughout the state across a wide range of lake-specific habitats, water quality conditions, and levels of human disturbance. …

The Ecology And Conservation Of The Eastern Spadefoot (Scaphiopus Holbrookii) In The Province Lands Of Cape Cod National Seashore, U.S.A., Brad Timm

Open Access Dissertations

The eastern spadefoot (Scaphiopus holbrookii) is an ephemeral wetland breeding amphibian that ranges from southern Florida north and westward to southeastern Missouri and northward along the Atlantic coastal plain to Massachusetts. This species is listed as either "threatened" or "endangered" in the four states (Connecticut, Massachusetts, New York, and Rhode Island) in the northeastern United States where it is known to exist. Population declines and extirpations throughout the region over the past century have been documented and are largely believed to be the result of habitat loss and/or alteration.

Very limited empirical results exist on many life history attributes of …

Factors Influencing Nest Site Selection By Wood Turtles (Glyptemys Insculpta) In An Altered Forest Landscape, Ellery Ruther

Theses & Honors Papers

There have been many studies concerning wood turtle (Glyptemys insculpta) nest site selection, including studies that evaluate nest site conditions when stream sand banks are not available. However, because of the unique landscape at our study site (high gradient, first order streams) and rapidly diminishing wood turtle populations in Virginia, I am evaluating wood turtle nest site selection. Nine physiographic and vegetative characteristics from nest, positive, negative-one and negative-two control locations were evaluated using binomial generalized linear models and then best fit models were chosen using Akaike's Information Criterion (AIC). It was found that in lieu of typical stream …

Transforming The South Carolina Botanical Garden, Amy Blackwell

All Dissertations

This dissertation addresses the question of how to transform a small to mid-sized public garden into a botanical garden capable of making a significant contribution to science. Botanical gardens have certain features that distinguish them from pleasure gardens and public parks. These include a scientific basis for collections, an emphasis on recording data on the plants in the collection, exchanging plant materials and data with other botanical gardens, and providing educational information to visitors. Gardens often have several missions, including conservation of rare and endangered species, botanical and ecological research, and involving the public through citizen science. I describe my …

Parentage Analysis And Conservation Genetics Educational Material For The Eastern Hellbender Salamander, Cryptobranchus Alleganiensis Alleganiensis, Sarah A. Chudyk

Master's Projects

Populations of the Eastern hellbender salamander, Cryptobranchus alleganiensis alleganiensis, are declining, making this a species of special concern in New York State and under consideration for Federal Endangered Species listing. As a result of this decline, the New York State Department of Environmental Conservation and the Buffalo Zoo initiated a headstarting program with an egg mass found in the Allegheny River drainage. The juveniles being raised by the Zoo will be released back into the watershed and so understanding the genetic diversity and parentage of these hellbenders will inform the reintroduction efforts. Furthermore, in order to determine how to …

Federal Conservation Spending Allocated By Agency, Emily Clare Manneschmidt

Chancellor’s Honors Program Projects

No abstract provided.

“Hariyo Ban Nepalko Dhan” (“Nepal’S Wealth Is The Green Forest”): The People’S Participation In Structuring Sustainable Development Through Community Forestry, Natasha Eulberg

Independent Study Project (ISP) Collection

Community forestry has a long history in Nepal, and despite the nationalization of the country’s forests in the mid-twentieth century, current legislation determines that rights and execution of community forest management lies largely with community forest user groups (CFUGs). This research questions to what extent CFUGs truly represent autonomous bodies with the full power and ability to manage and utilize community forests and forest resources. This research also seeks to determine the impact and distribution of CFUG operations and benefits on CFUG members, and the ways in which CFUG management practices have impacted how group members perceive and interact with …

The Emerald Ash Borer, Emily Bryant

The STEAM Journal

An Emerald Ash Borer made from recycled natural materials to create sustainable art.

Species Status Of Sclerocactus Brevispinus, S. Wetlandicus, And S. Glaucus: Inferences From Morphology, Chloroplast Dna Sequences, And Aflp Markers, J. Mark Porter, Jennifer Cruse-Sanders, Linda Prince, Robert Lauri

Aliso: A Journal of Systematic and Floristic Botany

We examine patterns of variation in 12 continuous morphological traits, chloroplast DNA sequences from 10 intergenic spacer regions (petA-psbJ, psbk-trnS, psbM-trnD, rpob-trnC, trnC-trnD, trnGCU-trnG2S, trnFM-trnUGA, atpF-atpH, trnT-trnD, trnQ-psbk), atpF, and rpl16, and Amplified Fragment Length Polymorphism (AFLP) genetic markers in Sclerocactus glaucus sensu lato (= S. brevispinus, S. glaucus, and S. wetlandicus), a complex that historically has been considered conspecific and afforded protection …

Differences In Habitat At Two Spatial Scales Fail To Predict Differing Occurrences Of Three Species Of Wintering Ammodramus Sparrows In South Carolina Salt Marshes, Kimberly A. Trinkle

Electronic Theses and Dissertations

Salt marshes have low levels of vertebrate diversity yet extremely high rates of endemism. Two of these endemic species are the Saltmarsh (Ammodramus caudacutus) and Seaside Sparrow (A. maritima); the closely related Nelson's sparrow (A. nelsoni) winters exclusively on salt marshes. A previous winter study found that individual sparrows of all three species were highly faithful to specific banding sites, and that the relative abundances of the three species differed by site. I hypothesized that the reason sparrow assemblages varied among sites was that the three species' winter habitat requirements were different. All three species winter in salt marshes, but …

Rating Harms To Wildlife: A Survey Showing Convergence Between Conservation And Animal Welfare Views, S. Dubois, D. Fraser

Environment and Nature Conservation Collection

Human activities may cause conservation concerns when animal populations or ecosystems are harmed and animal welfare concerns when individuals are harmed. In general, people are concerned with one or the other, as the concepts may be regarded as separate or even at odds. An online purposive survey of 339 British Columbians explored differences between groups that varied by gender, residency, wildlife engagement level and value orientation (conservation-oriented or animal welfare-oriented), to see how they rated the level of harm to wildlife caused by different human activities. Women, urban residents, those with low wildlife engagement, and welfare-orientated participants generally scored activities …

Using Gis-Based, Regional Extent Habitat Suitability Modeling To Identify Conservation Priority Areas: A Case Study Of The Louisiana Black Bear In East Texas, Christopher E. Comer, I-Kuai Hung, Gary Calkins, Dan J. Kaminski, Nathan Garner

Faculty Publications

State and federal recovery plans mandate that priority areas for future population expansion be identified within the historical range of the Louisiana black bear (Ursus americanus luteolus). Despite the presence of potentially suitable habitat in east Texas and expanding populations in adjacent states, quantitative estimates of regional habitat suitability do not exist. We developed a regional extent habitat suitability index (HSI) model in a geographic information system (GIS) to evaluate year-round habitat requirements for black bears in the 43,530-km2 south black bear recovery zone in southeastern Texas. We measured hard and soft mast production, understory vegetation density, and tree den …

The Influence Of Different Cover Types On American Robin Nest Success In Organic Agroecosystems, John E. Quinn, Amy Oden, James R. Brandle

Biology Publications

There are many opportunities for biodiversity conservation in organic farm systems. Successful and sustainable conservation efforts in organic systems, however, need to measure appropriate outcomes. In particular, data are needed on the breeding success of associated wildlife species. We measured nesting success of the American Robin (Turdus migratorius) in woodlands embedded within eight organic farms in eastern Nebraska. We modeled daily nest survival rate to identify land use and land cover patterns that optimize conservation of birds in organic farm systems. The percentage of a crop in the fields adjacent to linear woodlands best predicted daily survival rate. …

Beware The Boojum: Caveats And Strengths Of Avian Radar, Robert C. Beason, Tim J. Nohara, Peter Weber

Human–Wildlife Interactions

Radar provides a useful and powerful tool to wildlife biologists and ornithologists. However, radar also has the potential for errors on a scale not previously possible. In this paper, we focus on the strengths and limitations of avian surveillance radars that use marine radar front-ends integrated with digital radar processors to provide 360° of coverage. Modern digital radar processors automatically extract target information, including such various target attributes as location, speed, heading, intensity, and radar cross-section (size) as functions of time. Such data can be stored indefinitely, providing a rich resource for ornithologists and wildlife managers. Interpreting these attributes in …