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Full-Text Articles in Life Sciences
A Microarray Analysis Of Gene Expression Patterns During Early Phases Of Newt Lens Regeneration, Konstantinos Sousounis, Christian S. Michel, Marc Bruckskotten, Nobuyasu Maki, Thilo Borchardt, Thomas Braun, Mario Looso, Panagiotis A. Tsonis
A Microarray Analysis Of Gene Expression Patterns During Early Phases Of Newt Lens Regeneration, Konstantinos Sousounis, Christian S. Michel, Marc Bruckskotten, Nobuyasu Maki, Thilo Borchardt, Thomas Braun, Mario Looso, Panagiotis A. Tsonis
Biology Faculty Publications
Purpose: Notophthalmus viridescens, the red-spotted newt, possesses tremendous regenerative capabilities. Among the tissues and organs newts can regenerate, the lens is regenerated via transdifferentiation of the pigment epithelial cells of the dorsal iris, following complete removal (lentectomy). Under normal conditions, the same cells from the ventral iris are not capable of regenerating. This study aims to further understand the initial signals of lens regeneration.
Salamander Hox Clusters Contain Repetitive Dna And Expanded Non-Coding Regions: A Typical Hox Structure For Non-Mammalian Tetrapod Vertebrates?, Stephen Randal Voss, Srikrishna Putta, John A. Walker, Jeremiah J. Smith, Nobuyasu Maki, Panagiotis A. Tsonis
Salamander Hox Clusters Contain Repetitive Dna And Expanded Non-Coding Regions: A Typical Hox Structure For Non-Mammalian Tetrapod Vertebrates?, Stephen Randal Voss, Srikrishna Putta, John A. Walker, Jeremiah J. Smith, Nobuyasu Maki, Panagiotis A. Tsonis
Biology Faculty Publications
Hox genes encode transcription factors that regulate embryonic and post-embryonic developmental processes. The expression of Hox genes is regulated in part by the tight, spatial arrangement of conserved coding and non-coding sequences. The potential for evolutionary changes in Hox cluster structure is thought to be low among vertebrates; however, recent studies of a few non-mammalian taxa suggest greater variation than originally thought. Using next generation sequencing of large genomic fragments (>100 kb) from the red spotted newt (Notophthalamus viridescens), we found that the arrangement of Hox cluster genes was conserved relative to orthologous regions from other vertebrates, but the …
Hybrid Carbon-Based Scaffolds For Applications In Soft Tissue Reconstruction, Jarema S. Czarnecki, Khalid Lafdi, Robert M. Joseph, Panagiotis A. Tsonis
Hybrid Carbon-Based Scaffolds For Applications In Soft Tissue Reconstruction, Jarema S. Czarnecki, Khalid Lafdi, Robert M. Joseph, Panagiotis A. Tsonis
Biology Faculty Publications
Current biomedical scaffolds utilized in surgery to repair soft tissues commonly fail to meet the optimal combination of biomechanical and tissue regenerative properties. Carbon is a scaffold alternative that potentially optimizes the balance between mechanical strength, durability, and function as a cell and biologics delivery vehicle that is necessary to restore tissue function while promoting tissue repair. The goals of this study were to investigate the feasibility of fabricating hybrid fibrous carbon scaffolds modified with biopolymer, polycaprolactone and to analyze their mechanical properties and ability to support cell growth and proliferation. Environmental scanning electron microscopy, micro-computed tomography, and cell adhesion …
Implication Of The Mir-184 And Mir-204 Competitive Rna Network In Control Of Mouse Secondary Cataract, Andrea Hoffmann, Yusen Huang, Rinako Suetsugu-Maki, Carol S. Ringelberg, Craig R. Tomlinson, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Implication Of The Mir-184 And Mir-204 Competitive Rna Network In Control Of Mouse Secondary Cataract, Andrea Hoffmann, Yusen Huang, Rinako Suetsugu-Maki, Carol S. Ringelberg, Craig R. Tomlinson, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Biology Faculty Publications
The high recurrence rate of secondary cataract (SC) is caused by the intrinsic differentiation activity of residual lens epithelial cells after extra-capsular lens removal. The objective of this study was to identify changes in the microRNA (miRNA) expression profile during mouse SC formation and to selectively manipulate miRNA expression for potential therapeutic intervention. To model SC, mouse cataract surgery was performed and temporal changes in the miRNA expression pattern were determined by microarray analysis. To study the potential SC counterregulative effect of miRNAs, a lens capsular bag in vitro model was used. Within the first 3 wks after cataract surgery, …
Lens Regeneration In Axolotl: New Evidence Of Developmental Plasticity, Rinako Suetsugu-Maki, Nobuyasu Maki, Saulius Sumanas, Jie Zhu, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Lens Regeneration In Axolotl: New Evidence Of Developmental Plasticity, Rinako Suetsugu-Maki, Nobuyasu Maki, Saulius Sumanas, Jie Zhu, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Biology Faculty Publications
Background: Among vertebrates lens regeneration is most pronounced in newts, which have the ability to regenerate the entire lens throughout their lives. Regeneration occurs from the dorsal iris by transdifferentiation of the pigment epithelial cells. Interestingly, the ventral iris never contributes to regeneration. Frogs have limited lens regeneration capacity elicited from the cornea during pre-metamorphic stages. The axolotl is another salamander which, like the newt, regenerates its limbs or its tail with the spinal cord, but up until now all reports have shown that it does not regenerate the lens.
Detection Of Mycobacterium Ulcerans In The Environment Predicts Prevalence Of Buruli Ulcer In Benin, Heather R. Williamson, Mark Eric Benbow, Lindsay P. Cambell, Christian R. Johnson, Ghislain Sopoh, Yves Barogui, Richard W. Merritt, Pamela L. C. Small
Detection Of Mycobacterium Ulcerans In The Environment Predicts Prevalence Of Buruli Ulcer In Benin, Heather R. Williamson, Mark Eric Benbow, Lindsay P. Cambell, Christian R. Johnson, Ghislain Sopoh, Yves Barogui, Richard W. Merritt, Pamela L. C. Small
Biology Faculty Publications
Background: Mycobacterium ulcerans is the causative agent of Buruli ulcer (BU), a destructive skin disease found predominantly in sub-Saharan Africa and south-eastern Australia. The precise mode(s) of transmission and environmental reservoir(s) remain unknown, but several studies have explored the role of aquatic invertebrate species. The purpose of this study was to investigate the environmental distribution of M. ulcerans in south-eastern Australia.
A Complement Receptor C5a Antagonist Regulates Epithelial To Mesenchymal Transition And Crystallin Expression After Lens Cataract Surgery In Mice, Rinako Suetsugu-Maki, Nobuyasu Maki, Timothy P. Fox, Kenta Nakamura, Richard Cowper.Solari, Craig R. Tomlinson, Hongchang Qu, John D. Lambris, Panagiotis A. Tsonis
A Complement Receptor C5a Antagonist Regulates Epithelial To Mesenchymal Transition And Crystallin Expression After Lens Cataract Surgery In Mice, Rinako Suetsugu-Maki, Nobuyasu Maki, Timothy P. Fox, Kenta Nakamura, Richard Cowper.Solari, Craig R. Tomlinson, Hongchang Qu, John D. Lambris, Panagiotis A. Tsonis
Biology Faculty Publications
Purpose: To evaluate the effects of complement employing a mouse model for secondary cataract. Methods: The role of complement receptor C5a (CD88) was evaluated after cataract surgery in mice. An antagonist specific to C5a receptor was administered intraperitoneally to mice. Epithelial to mesenchymal transition (EMT) was evaluated by alpha-smooth muscle actin (α-SMA) staining and proliferation by bromodeoxyuridine (5-bromo-2'- deoxyuridine, BrdU) incorporation. Gene expression patterns was examined by microarray analysis and quantitative polymerase chain reaction (QPCR). Results: We found that administration of a C5aR antagonist in C57BL/6J mice decreases EMT, as evidenced by α-SMA expression, and cell proliferation. Gene expression by …
A Major Role For Mammals In The Ecology Of Mycobacterium Ulcerans, Janet A. Fyfe, Caroline J. Lavender, Kathrine A. Handasyde, Alistair R. Legione, Carolyn R. O'Brien, Timothy P. Stinear, Sacha J. Pidot, Torsten Seemann, Mark Eric Benbow, John R. Wallace, Christina Mccowan, Paul D. R. Johnson
A Major Role For Mammals In The Ecology Of Mycobacterium Ulcerans, Janet A. Fyfe, Caroline J. Lavender, Kathrine A. Handasyde, Alistair R. Legione, Carolyn R. O'Brien, Timothy P. Stinear, Sacha J. Pidot, Torsten Seemann, Mark Eric Benbow, John R. Wallace, Christina Mccowan, Paul D. R. Johnson
Biology Faculty Publications
Background: Mycobacterium ulcerans is the causative agent of Buruli ulcer (BU), a destructive skin disease found predominantly in sub-Saharan Africa and south-eastern Australia. The precise mode(s) of transmission and environmental reservoir(s) remain unknown, but several studies have explored the role of aquatic invertebrate species. The purpose of this study was to investigate the environmental distribution of M. ulcerans in south-eastern Australia.
Adapting Biodegradable Oligo(Poly(Ethylene Glycol) Fumarate) Hydrogels For Pigment Epithelial Cell Encapsulation And Lens Regeneration, Mimi W. Zhang, Hansoo Park, Xuan Guo, Kenta Nakamura, Robert M. Raphael, F. Kurtis Kasper, Antonios G. Mikos, Panagiotis A. Tsonis
Adapting Biodegradable Oligo(Poly(Ethylene Glycol) Fumarate) Hydrogels For Pigment Epithelial Cell Encapsulation And Lens Regeneration, Mimi W. Zhang, Hansoo Park, Xuan Guo, Kenta Nakamura, Robert M. Raphael, F. Kurtis Kasper, Antonios G. Mikos, Panagiotis A. Tsonis
Biology Faculty Publications
This study investigated the encapsulation of newt iris pigment epithelial cells (PECs), which have the ability to regenerate a lens by trans-differentiation in vivo, within a biodegradable hydrogel of oligo(poly(ethylene glycol) fumarate) crosslinked with poly(ethylene glycol)-diacrylate. Hydrogel beads of initial diameter of 1mm were fabricated by a molding technique. The swelling ratio and degradation rate of the hydrogel beads decreased with increasing crosslinking ratios. Confocal microscopy confirmed the cytocompatibility of crosslinking hydrogel formulations as evidenced by the viability of an encapsulated model cell line within a crosslinked hydrogel bead. Hydrogel beads encapsulating iris PECs were also implanted into lentectomized newts …
Expression Profiles During Dedifferentiation In Newt Lens Regeneration Revealed By Expressed Sequence Tags, Nobuyasu Maki, John Martinsou, Osamu Nishimura, Hiroshi Tarui, Jaroslaw Meller, Panagiotis A. Tsonis, Kiyokazu Agata
Expression Profiles During Dedifferentiation In Newt Lens Regeneration Revealed By Expressed Sequence Tags, Nobuyasu Maki, John Martinsou, Osamu Nishimura, Hiroshi Tarui, Jaroslaw Meller, Panagiotis A. Tsonis, Kiyokazu Agata
Biology Faculty Publications
Purpose: The adult newt can regenerate lens from pigmented epithelial cells (PECs) of the dorsal iris via dedifferentiation. The purpose of this research is to obtain sequence resources for a newt lens regeneration study and to obtain insights of dedifferentiation at the molecular level.
Tubulin Evolution In Insects: Gene Duplication And Subfunctionalization Provide Specialized Isoforms In A Functionally Constrained Gene Family, Mark G. Nielsen, Sudhindra R. Gadagkar, Lisa Gutzwiller
Tubulin Evolution In Insects: Gene Duplication And Subfunctionalization Provide Specialized Isoforms In A Functionally Constrained Gene Family, Mark G. Nielsen, Sudhindra R. Gadagkar, Lisa Gutzwiller
Biology Faculty Publications
Background: The completion of 19 insect genome sequencing projects spanning six insect orders provides the opportunity to investigate the evolution of important gene families, here tubulins. Tubulins are a family of eukaryotic structural genes that form microtubules, fundamental components of the cytoskeleton that mediate cell division, shape, motility, and intracellular trafficking. Previous in vivo studies in Drosophila find a stringent relationship between tubulin structure and function; small, biochemically similar changes in the major alpha 1 or testis-specific beta 2 tubulin protein render each unable to generate a motile spermtail axoneme. This has evolutionary implications, not a single non-synonymous substitution is …
A Novel Approach To Control Growth, Orientation, And Shape Of Human Osteoblasts, Jarema S. Czarnecki, Khalid Lafdi, Panagiotis A. Tsonis
A Novel Approach To Control Growth, Orientation, And Shape Of Human Osteoblasts, Jarema S. Czarnecki, Khalid Lafdi, Panagiotis A. Tsonis
Biology Faculty Publications
Carbon-based materials are considered to be promising materials as implants because of their unique mechanical and biocompatibility properties. The current paper investigates the use of carbon-based materials as a functional interface for tissue scaffolds and medical implants. Three basic parameters were explored such as graphene orientation, crystallinity and surface interaction. To explore the effect of the orientation, samples were made with and without a preferred carbon orientation. Conversely, the crystallinity was studied using graphitic and carbonaceous matrices. Fluorescent, confocal and environmental scanning microscopy was used to visualize cell response. The cell attachment, proliferation and elongation were prevalent on the unidirectional …
Regeneration Of Retinotectal Projections After Optic Tectum Removal In Adult Newts, Mitsumasa Okamoto, Hatsuki Ohsawa, Toshinori Hayashi, Katsushi Owaribe, Panagiotis A. Tsonis
Regeneration Of Retinotectal Projections After Optic Tectum Removal In Adult Newts, Mitsumasa Okamoto, Hatsuki Ohsawa, Toshinori Hayashi, Katsushi Owaribe, Panagiotis A. Tsonis
Biology Faculty Publications
Purpose: When injured, the adult newt possesses the remarkable capability to regenerate tissues and organs with return of function and physiology. One example is the newt eye, in which regeneration can restore normal vision if the retina or lens has been removed. We wanted to examine how the retinotectal projections regenerate after removal of the brain’s optic tectum and establish this animal as a model for retinal projection as well as a central nervous system regeneration model.
Identification Of Micrornas And Other Small Rnas From The Adult Newt Eye, Evgeny Makarev, Jason R. Spence, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Identification Of Micrornas And Other Small Rnas From The Adult Newt Eye, Evgeny Makarev, Jason R. Spence, Katia Del Rio-Tsonis, Panagiotis A. Tsonis
Biology Faculty Publications
MicroRNAs (miRNAs) are capable of controlling gene expression by targeting complimentary sequences in many mRNAs. Thus, a small number of miRNAs are capable of regulating expression of many different genes. miRNAs have been found in all animals from Drosophila to human and they are highly conserved. This work was undertaken in order to identify such RNAs in the newt eye.
Gene Expression And Discovery During Lens Regeneration In Mouse: Regulation Of Epithelial To Mesenchymal Transition And Lens Differentiation, Mario Medvedovic, Craig R. Tomlinson, Mindy Kay Call, Matthew Grogg, Panagiotis A. Tsonis
Gene Expression And Discovery During Lens Regeneration In Mouse: Regulation Of Epithelial To Mesenchymal Transition And Lens Differentiation, Mario Medvedovic, Craig R. Tomlinson, Mindy Kay Call, Matthew Grogg, Panagiotis A. Tsonis
Biology Faculty Publications
Purpose: It has been shown that after extracapsular lens removal by anterior capsulotomy in the mouse, the lens can be regenerated. However, as the capsular bag is filled with fibers, epithelial to mesenchymal transition (EMT), an event which is common after cataract surgery as well, takes place during early stages. This study, using a unique mouse model, was undertaken to identify novel regulators and networks in order to more clearly understand secondary cataracts at the molecular level.
A Comparative 2-Dimensional Gel Protein Database Of The Intact And Regenerating Newt Limbs, Panagiotis A. Tsonis
A Comparative 2-Dimensional Gel Protein Database Of The Intact And Regenerating Newt Limbs, Panagiotis A. Tsonis
Biology Faculty Publications
In this paper we describe a two-dimensional gel database of the regenerating newt limb. Protein synthesis was compared in the intact limb, in the 1-week regenerating limb, representing the dedifferentiation stage, and in the 2-week regenerating limb, representing the formation of the blastema. This comparative database provided data on differential expression of about 800 proteins during the process of limb regeneration. In addition, a map has been generated for these proteins for future guidance in characterizing further new, unknown proteins. The overall expression patterns of the proteins indicated that the dedifferentiation stage was marked by down-regulation of most proteins, while …
Control Of Partitioning And Export Of Carbon In Leaves Of Higher-Plants, Donald R. Geiger
Control Of Partitioning And Export Of Carbon In Leaves Of Higher-Plants, Donald R. Geiger
Biology Faculty Publications
Within source leaves, partition of assimilated carbon and export are regulated to both leaf and plant ontogeny and to environmental conditions. System goals, adaptive responses, control mechanisms, and information flow are developed from the viewpoint that a well-adapted plant is an integrated system. Regulation of partitioning and export involves both feedforward control and feedback homeostasis. Export is controlled by regulation of metabolism which supplies assimilated material to be translocated, by control of efflux into the free space of material destined for export, and by regulation of phloem loading. Control of export by the latter two processes depends on responsive metabolic …
Comparison Of Carbon And Nitrogen Content Of Infected And Uninfected Snails, Succinea Ovalis, And The Trematode Leucochloridium Variae, Albert J. Burky, Daniel J. Hornbach
Comparison Of Carbon And Nitrogen Content Of Infected And Uninfected Snails, Succinea Ovalis, And The Trematode Leucochloridium Variae, Albert J. Burky, Daniel J. Hornbach
Biology Faculty Publications
In June, 6.7% of adult Succinea ovalis collected near Urbana, Ohio, were infected with the trematode, Leucochloridium variae. The effects of parasitism were assessed as total organic carbon (equivalent to calorific values) and as total nitrogen. The parasite represents 23.8% of total (parasite + snail tissue) dry tissue weight, 21.4% of total carbon and 19.8% of total nitrogen of infected snails. The higher C:N ratio for parasite tissue indicates a higher proportion of nonproteinaceous compounds (e.g., fats and/or carbohydrates) as compared to host tissue. There is less snail tissue in parasitized S. ovalis. The C:N ratios for parasitized and nonparasitized …