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Identification Of Carrying Alien Dna Fragments In Solanum Melongena X Solanum Incanum Interspecific Progeny By Using Cosii Marker, Görkem Sülü, İlknur Polat, Hati̇ce Fi̇li̇z Boyaci, Ahmet Naci̇ Onus Mar 2024

Identification Of Carrying Alien Dna Fragments In Solanum Melongena X Solanum Incanum Interspecific Progeny By Using Cosii Marker, Görkem Sülü, İlknur Polat, Hati̇ce Fi̇li̇z Boyaci, Ahmet Naci̇ Onus

Turkish Journal of Botany

Cultivated eggplant (Solanum melongena L.) is produced in many countries with temperate and tropical climates and has great economic importance. In recent years, resistance to biotic and abiotic stress conditions in addition to increasing yield and quality has gained importance in plant breeding including eggplant breeding. Therefore, the wild relative S. incanum is an important parent in breeding studies as it provides resistance to some important biotic and abiotic stresses for eggplant. It is possible to obtain a fully fertile hybrid between the two species, as well as to establish F2 lines. However, it is a mystery whether there is …


Investigation Of Molecular Detection Rate And Associated Risk Factors Of Psittacine Beak And Feather Disease Virus In Psittaciformes In Iran, Mojtaba Khosravi, Shoreh Alian Samakkhah, Rahem Khoshbakht Feb 2024

Investigation Of Molecular Detection Rate And Associated Risk Factors Of Psittacine Beak And Feather Disease Virus In Psittaciformes In Iran, Mojtaba Khosravi, Shoreh Alian Samakkhah, Rahem Khoshbakht

Turkish Journal of Veterinary & Animal Sciences

Psittacine beak and feather disease virus (PBFDV) is a significant viral pathogen affecting the development of beak and feather cells, leading to feather abnormalities in avian species. This study aimed to investigate the molecular detection rate of PBFDV among Psittaciformes in Iran and to evaluate the influence of factors such as sex, species, season, and bird origin on PBFDV prevalence. Feather samples were collected from 1335 Psittaciformes, including Agapornis roseicollis, Pyrrhura molinae, Myiopsitta monachus, Aratinga solstitialis, Nymphicus hollandicus, Psittacula krameri, Psittacus erithacus, Poicephalus senegalus, Eos bornea, and Agapornis fischeri, and subjected to polymerase chain reaction (PCR) for PBFDV detection. The …


Prevalence Of Carriers Of Cholesterol Deficiency–Associated Apob Mutation In Some Native, Holstein And Simmental Cattle Breeds In Türkiye, Hasan Meydan, Kübra Bedi̇r Di̇bi̇ç, Onur Vural, Mehmet Ali̇ Yildiz, Jørgen S. Agerholm Dec 2023

Prevalence Of Carriers Of Cholesterol Deficiency–Associated Apob Mutation In Some Native, Holstein And Simmental Cattle Breeds In Türkiye, Hasan Meydan, Kübra Bedi̇r Di̇bi̇ç, Onur Vural, Mehmet Ali̇ Yildiz, Jørgen S. Agerholm

Turkish Journal of Veterinary & Animal Sciences

Genetic diseases play an increasingly important role in cattle breeding as breeding technologies such as artificial insemination has an inborn risk of disseminating deleterious genes, especially from high merit breeding sires. Cholesterol deficiency (CD) is a metabolic disorder first recognized in Holstein cattle in 2015. The condition is characterized by chronic diarrhea and unthriftiness in calves being homozygous for the defective allele. The prevalence of carriers of CD in Turkish cattle is at present unknown and therefore 700 heifers and cows of different breeds, including 300 Holsteins were genotyped. Of the tested Holsteins, 2.0% turned out to be carriers of …


Examination Of Canine Herpesvirus-1 In Dogs By Serological, Molecular, And Pathological Methods, Serkan Yildirim, Fatma Gülten Bayraktar, Hakan Aydin, Yavuz Seli̇m Sağlam, Gi̇zem Eser, Muhammet Bahaeddi̇n Dörtbudak Jan 2023

Examination Of Canine Herpesvirus-1 In Dogs By Serological, Molecular, And Pathological Methods, Serkan Yildirim, Fatma Gülten Bayraktar, Hakan Aydin, Yavuz Seli̇m Sağlam, Gi̇zem Eser, Muhammet Bahaeddi̇n Dörtbudak

Turkish Journal of Veterinary & Animal Sciences

In this study, it was aimed to examine Canine Herpesvirus-1 (CHV-1) with different diagnostic methods and investigate the pathological changes in positive samples. For this purpose, 100 dog uteruses of different ages and breeds, were removed by ovariohysterectomy and their blood samples were used as the study material. Enzyme-linked immunosorbent assay (ELISA) and Indirect Fluorescent Antibody Test (IFAT) for serological diagnosis, polymerase chain reaction (PCR) method for molecular diagnosis, immunohistochemistry (IHC) and immunofluorescence (IF) staining for immunopathological diagnosis were performed on the samples. Additionally, hematoxylin and eosin (HE) staining was performed to examine the histopathological changes in the CHV- 1-positive …


Detection Of Rhodococcus Equi By Pcr From Foals And Determination Of Antimicrobial Susceptibility, Şükrü Kirkan, Uğur Parin, Hafi̇ze Tuğba Yüksel Dolgun, Eli̇f Oya Oral Jan 2021

Detection Of Rhodococcus Equi By Pcr From Foals And Determination Of Antimicrobial Susceptibility, Şükrü Kirkan, Uğur Parin, Hafi̇ze Tuğba Yüksel Dolgun, Eli̇f Oya Oral

Turkish Journal of Veterinary & Animal Sciences

The scope of this research was determination of Rhodococcus equi isolates and antimicrobial susceptibilities in nasal swab specimen taken from animals between 0 and 6 months of age period. R. equi was identified from 10 isolates (11.1%) by automatic identification device. The verification of isolates were conducted by 16S ribosomal RNA PCR. VapA gene presence was detected in two (20%) isolates and multidrug resistance was identified against 11 antimicrobials. The antimicrobial resistance to macrolides and rifampin is arising worldwide since the excessive usage of the chemotherapeutics in various breeding farms just by evaluating monitoring outcomes. These results exhibit the presence …


Application Of An Indirect Mila Elisa For The Detection Of Mycoplasma Bovis Antibodiesin Bovine Milk, Abd Al Bar Al Farha, Nadeeka Wawegama, Farhid Hemmatzadeh, Simon Firestone, Jamie Moffat, Gholam Ali Kojouri, Ania Ahaniazari, Reza Amanollahi, Andrew Hoare, Kiro Petrovski Jan 2020

Application Of An Indirect Mila Elisa For The Detection Of Mycoplasma Bovis Antibodiesin Bovine Milk, Abd Al Bar Al Farha, Nadeeka Wawegama, Farhid Hemmatzadeh, Simon Firestone, Jamie Moffat, Gholam Ali Kojouri, Ania Ahaniazari, Reza Amanollahi, Andrew Hoare, Kiro Petrovski

Turkish Journal of Veterinary & Animal Sciences

The objective of this study was to detect Mycoplasma bovis specific antibodies using a recently reported MilA ELISA with the aim to detect M. bovis antibodies in milk. An indirect ELISA, based on a recombinant fragment of the Mycoplasma immunogenic lipase A (MilA) protein, was conducted on 291 milk samples for the detection of M. bovis antibodies. Samples were also tested with conventional Mycoplasma culture and M. bovis PCR. Samples were collected from individual cows from 2 commercial dairy herds in South Australia. Of 291 samples tested, 68 (23.4%) were detected positive for M. bovis antibodies, 150 (51.5%) were positive …


Evaluation Of Larval Culture And Conventional Pcr Methods For The Detection Ofstrongylus Vulgaris In Equines Of Iran, Alireza Alborzi, Sara Larki, Abbas Zeinali Jan 2020

Evaluation Of Larval Culture And Conventional Pcr Methods For The Detection Ofstrongylus Vulgaris In Equines Of Iran, Alireza Alborzi, Sara Larki, Abbas Zeinali

Turkish Journal of Veterinary & Animal Sciences

Strongylus vulgaris (S. vulgaris) is known as the equin's most pathogenic nematode due to the extraintestinal migration in mesenteric arterial vessels. Since a few kinds of S. vulgaris can threat the animals' health and working efficiency, high precision and early detection of strongylid nematodes is essential. Traditionally, the larval coproculture method was used frequently for identification of strongylid species. The technique of larval culture is costly, time consuming, and does not have sufficient accuracy and reliability. Here, we critically evaluated the polymerase chain reaction (PCR) with larval culture methods for the detection of S. vulgaris eggs in fecal samples. To …


An Atypical Localization Of Bacillus Anthracis In A Cow's Milk And Udder, Mi̇tat Şahi̇n, Fati̇h Büyük, Özgür Çelebi̇, Mustafa Reha Coşkun Jan 2020

An Atypical Localization Of Bacillus Anthracis In A Cow's Milk And Udder, Mi̇tat Şahi̇n, Fati̇h Büyük, Özgür Çelebi̇, Mustafa Reha Coşkun

Turkish Journal of Veterinary & Animal Sciences

A 6-year-old Simental-Swiss Brown cross-bred cow, which aborted in the first trimester of the gestation and involuntarily presented anthrax bacilli around the udder, was subjected to this study. The cow was vaccinated with an attenuated anthrax vaccine (Bacillus anthracis 34 F2) 6 months ago and had normal physical examination findings. Samples taken 10 days after the abortion were representative of all possible spaces that could carry the bacteria such as milk, blood, environment, and swabs from rectum, udder and tits of an infected cow. Microbiological examination was carried out by staining the smears with Azure and in vitro culture of …


Identification Of Sarcocystis Spp. By Polymerase Chain Reaction And Microscopic Examination In Various Beef Products (Minced Meat, Meatballs, Fermented Sausage), Ufuk Kamber, Mükremi̇n Özkan Arslan, Güven Gülbaz, Gencay Taşkin Taşçi, Ati̇la Akça Jan 2018

Identification Of Sarcocystis Spp. By Polymerase Chain Reaction And Microscopic Examination In Various Beef Products (Minced Meat, Meatballs, Fermented Sausage), Ufuk Kamber, Mükremi̇n Özkan Arslan, Güven Gülbaz, Gencay Taşkin Taşçi, Ati̇la Akça

Turkish Journal of Veterinary & Animal Sciences

Sarcocystis species are the most commonly encountered parasitic organisms in animals. Sarcocystis hominis (Sarcocystis bovihominis), the species found in beef cattle, is not visible macroscopically in muscle tissue. In recent years it has been established that, in addition to being a zoonotic parasite transmitted via the consumption of beef, the parasite produces toxins and causes food poisoning. Therefore, this study was undertaken in order to determine the extent to which Sarcocystis species are present in minced meat, meatballs, and fermented sausages produced from beef and marketed in Kars. A total of 150 samples, 50 of each product, were collected in …


The Pathology Of Tuberculosis Lesions In Allergic Skin Test (Ppd Tuberculin) Positive Cows And Detection Of Tuberculosis Agents With Pcr In Milk Samples, Çi̇ğdem Tuncay, Fati̇h Hati̇poğlu Jan 2018

The Pathology Of Tuberculosis Lesions In Allergic Skin Test (Ppd Tuberculin) Positive Cows And Detection Of Tuberculosis Agents With Pcr In Milk Samples, Çi̇ğdem Tuncay, Fati̇h Hati̇poğlu

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to determine tuberculosis (Tb) agents in milk and the pathologic changes in the tissues and organs of 100 PPD Tb-positive cows that were intended for slaughter. Milk samples were taken before slaughtering and PCR analysis was conducted to detect the Tb agent. In postmortem examinations, the lungs, liver, mammary glands, spleen, kidneys, and heart were collected for macroscopic and histopathological examinations. Out of the 100 PPD positive cows, lesions of Tb were observed in 75 cows. In the microscopic examination, Tb was identified in the lungs (51 cases), liver (61 cases), and in both …


Detection Of The Contamination Sources Of Listeria Monocytogenes In Pickled White Cheese Production Process Line And Genotyping With The Pulsed-Field Gel Electrophoresis Method, Ni̇hat Telli̇, Ahmet Güner, Ferda Soyer Dönmez, Özgün Öykü Özdemi̇r Jan 2016

Detection Of The Contamination Sources Of Listeria Monocytogenes In Pickled White Cheese Production Process Line And Genotyping With The Pulsed-Field Gel Electrophoresis Method, Ni̇hat Telli̇, Ahmet Güner, Ferda Soyer Dönmez, Özgün Öykü Özdemi̇r

Turkish Journal of Veterinary & Animal Sciences

This study was conducted to determine the contamination sources, serotyping profiles, and antibiotic resistance patterns of Listeria monocytogenes isolated during the production of pickled white cheese. The genetic-relatedness of the isolates to EGD SLCC (5835) (1/2a, lineage II) and ATCC (13932) (4b, lineage I) reference strains was also determined with pulsed-field gel electrophoresis (PFGE) as a result of digestions with AscI and ApaI enzymes. Samples were collected from 16 different points in the production process of 4 different plants at 3 different times. Among the 192 samples examined, 17 (8.85%) were determined to be contaminated with Listeria spp. Three isolates …


Molecular And Seroprevalence Of Canine Visceral Leishmaniasis In West Anatolia, Turkey, Serkan Bakirci, Hüseyi̇n Bi̇lgi̇n Bi̇lgi̇ç, Onur Köse, Ayça Aksulu, Seli̇n Hacilarlioğlu, Hasan Erdoğan, Tüli̇n Karagenç Jan 2016

Molecular And Seroprevalence Of Canine Visceral Leishmaniasis In West Anatolia, Turkey, Serkan Bakirci, Hüseyi̇n Bi̇lgi̇n Bi̇lgi̇ç, Onur Köse, Ayça Aksulu, Seli̇n Hacilarlioğlu, Hasan Erdoğan, Tüli̇n Karagenç

Turkish Journal of Veterinary & Animal Sciences

Canine leishmaniasis (CanL) is a protozoal disease caused by Leishmania species. Dogs play an important role as a reservoir. The aim of this study is to determine the prevalence of CanL by molecular and serological techniques among stray dogs living in kennels in Aydın, Manisa, and İzmir, located in western Turkey. Blood samples were collected from a total of 191 dogs and analyzed using indirect immunofluorescence antibody test (IFAT) and polymerase chain reaction (PCR). The isolates that tested positive using PCR were further analyzed by real-time PCR for species identification and confirmation. A total of 21 (10.99%) dogs were found …


High Level Fluoroquinolone Resistance In Escherichia Coli Isolatedfrom Animals In Turkey Is Due To Multiple Mechanisms, Pinar Şahi̇ntürk, Erdem Arslan, Esra Büyükcangaz, Songül Sonal, Ayşi̇n Şen, Fi̇gen Ersoy, Mark A. Webber, Laura Jv. Piddock, Murat Cengi̇z Jan 2016

High Level Fluoroquinolone Resistance In Escherichia Coli Isolatedfrom Animals In Turkey Is Due To Multiple Mechanisms, Pinar Şahi̇ntürk, Erdem Arslan, Esra Büyükcangaz, Songül Sonal, Ayşi̇n Şen, Fi̇gen Ersoy, Mark A. Webber, Laura Jv. Piddock, Murat Cengi̇z

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to determine the molecular mechanisms of fluoroquinolone resistance in E. Coli isolated from cattle, goats, sheep, cats, and dogs in Turkey. Twenty nonreplicate E. Coli isolates (chosen on the basis of RAPD pattern) from food-producing animals were selected for the study. To identify phenotypic differences between isolates, the sum of the MIC values of 14 antimicrobials was calculated; values ranged from 565 to 2520 μg/mL, indicating the diversity in antimicrobial resistance present in the panel of isolates. PCR and qRT-PCR were used to characterize the presence and expression levels of known molecular mechanisms of …


Isolation Of Virulent Rhodococcus Equi From Arabian Horses In Şanlıurfa, Turkey, Osman Yaşar Tel, Oktay Keski̇n, Sevi̇l Erdenli̇ğ Gürbi̇lek Jan 2016

Isolation Of Virulent Rhodococcus Equi From Arabian Horses In Şanlıurfa, Turkey, Osman Yaşar Tel, Oktay Keski̇n, Sevi̇l Erdenli̇ğ Gürbi̇lek

Turkish Journal of Veterinary & Animal Sciences

The purposes of this study were to investigate plasmid profiles of the isolated virulent (VapA positive) agents by RFLP and to determine the quantitative aspects of Rhodococcus equi in the feces of adult horses and foals, as well as in soil. The frequency of detection of R. equi and virulent R. equi in fecal samples and soil was studied from 20 farms in the Şanlıurfa region. A total of 315 samples were examined. Nasal swabs from 25 foals with pneumonia were also analyzed. R. equi was isolated and identified from 263 (83.4%) samples originating from 15 out of 20 farms. …


Investigation Of Conception Rates Achieved With The Transfer Of Sexed And Unsexed Bovine Embryos, Tahi̇r Karaşahi̇n, Numan Akyol, Muharrem Satilmiş, Sedat Hamdi̇ Kizil, Mustafa Numan Bucak, Kenan Çoyan Jan 2014

Investigation Of Conception Rates Achieved With The Transfer Of Sexed And Unsexed Bovine Embryos, Tahi̇r Karaşahi̇n, Numan Akyol, Muharrem Satilmiş, Sedat Hamdi̇ Kizil, Mustafa Numan Bucak, Kenan Çoyan

Turkish Journal of Veterinary & Animal Sciences

The objective of this study was to investigate the conception rates achieved with the transfer of in-vivo–derived sexed and unsexed Holstein bovine embryos to appropriate recipients and to determine the accuracy of nonelectrophoretic PCR sexing. Seven-day-old embryos were derived in vivo by the nonsurgical flushing of the uterus. Before being vitrified and frozen some of the embryos obtained were sexed, while others were not sexed and were maintained as the control group. After thawing, the sexed and unsexed embryos were transferred to 23 and 21 bovine recipients, respectively. The conception rates achieved with the transfer of the sexed and unsexed …


Chlorolepiota Brunneotincta: A New Species (Agaricaceae) From India, Narender Singh Atri, Babita Kumari, Ramesh Chandra Upadhyay Jan 2014

Chlorolepiota Brunneotincta: A New Species (Agaricaceae) From India, Narender Singh Atri, Babita Kumari, Ramesh Chandra Upadhyay

Turkish Journal of Botany

The genus Chlorolepiota Sathe & Deshpande is a monotypic genus represented by C. mahabaleshwerences Sathe & Deshpande. In this paper, a new species, Chlorolepiota brunneotincta, is described, based upon macroscopic, microscopic, and molecular studies undertaken on the collection from Solan Himachal Pradesh (India).


First Detection And Molecular Identification Of Babesia Gibsoni In Two Dogs From The Aydın Province Of Turkey, Nuran Aysul, Kerem Ural, Bülent Ulutaş, Hasan Eren, Tüli̇n Karagenç Jan 2013

First Detection And Molecular Identification Of Babesia Gibsoni In Two Dogs From The Aydın Province Of Turkey, Nuran Aysul, Kerem Ural, Bülent Ulutaş, Hasan Eren, Tüli̇n Karagenç

Turkish Journal of Veterinary & Animal Sciences

Small (1-3 µm in diameter, ring, oval, or comma shaped) piroplasms suggestive of Babesia spp. were observed upon microscopic examination of Giemsa-stained peripheral blood smears from a 3.5-year-old American Pit Bull Terrier with clinical signs of pyrexia, weakness, mucous membrane pallor, and depression living in Aydın, Turkey, in February, 2009. To confirm the presence and to identify the species of Babesia spp., a polymerase chain reaction (PCR) technique was performed using primers amplifying a 670 bp fragment of the 18S rRNA gene of Babesia gibsoni and the PCR products were analyzed by sequencing. The nucleotide sequence was compared to the …


Clostridium Botulinum In Honey: Prevalence And Antibiotic Susceptibility Of Isolated Strains, Ahmet Koluman, Berfi̇n Meli̇koğlu Gölcü, Okan Deri̇n, Si̇bel Özkök, Fabrizio Anniballi Jan 2013

Clostridium Botulinum In Honey: Prevalence And Antibiotic Susceptibility Of Isolated Strains, Ahmet Koluman, Berfi̇n Meli̇koğlu Gölcü, Okan Deri̇n, Si̇bel Özkök, Fabrizio Anniballi

Turkish Journal of Veterinary & Animal Sciences

Clostridium botulinum and rare strains of C. butyricum and C. baratii produce an extremely potent toxin, the botulinum neurotoxin (BoNT). Infant botulism is significant for both its high mortality rates and for the sophisticated treatment that it requires. Isolation and identification of C. botulinum according to standards depend on mouse bioassays to determine toxin-producing ability of strains. Polymerase chain reaction (PCR) is used to detect the types of toxins expressed by bacteria. Since honey is an important source of infant botulism, we determined the types of toxins secreted by C. botulinum strains and their antibiotic resistance. In this study, the …


Indel Mutation Of The Add1/Srebp-1c Gene In The South Anatolian Red And East Anatolian Red Cattle Breeds, Kemal Özdem Öztabak, Iraz Akiş Akad, Feraye Esen Gürsel, Ati̇la Ateş, Hasret Yardi̇bi̇, Gülhan Türkay Hoştürk Jan 2013

Indel Mutation Of The Add1/Srebp-1c Gene In The South Anatolian Red And East Anatolian Red Cattle Breeds, Kemal Özdem Öztabak, Iraz Akiş Akad, Feraye Esen Gürsel, Ati̇la Ateş, Hasret Yardi̇bi̇, Gülhan Türkay Hoştürk

Turkish Journal of Veterinary & Animal Sciences

The present study was designed to determine genotypes of adipocyte determination and differentiation-dependent factor 1 (ADD1)/sterol regulatory element-binding protein-1c (SREBP1c) in South Anatolian Red (SAR) and East Anatolian Red (EAR) cattle. Fifty cattle from the SAR breed and 43 cattle from the EAR breed were used. Intron 7 of the ADD1/SREBP1c gene containing an 84 bp indel mutation was amplified by polymerase chain reaction (PCR). The number of SS genotyped individuals with the 84 bp deletion associated with fatty acid composition and growth traits were very low in both breeds. The frequency of the LL genotype with the 84 bp …


Comparative Diagnostic Methods For Canine Ehrlichiosis, Chetan Parmar, Riddhi Pednekar, Anant Jayraw, Mukulesh Gatne Jan 2013

Comparative Diagnostic Methods For Canine Ehrlichiosis, Chetan Parmar, Riddhi Pednekar, Anant Jayraw, Mukulesh Gatne

Turkish Journal of Veterinary & Animal Sciences

The efficacy of blood and buffy coat smear examination, commercially available dot-enzyme-linked immunosorbent assay (ELISA) kit, and nested polymerase chain reaction (PCR) was evaluated in the diagnosis of canine ehrlichiosis in 40 dogs exhibiting symptoms suggestive of the disease. The intracytoplasmic rickettsial organisms were seen in the smears of only 1 dog (2.5%) with an extremely low level of parasitemia. Nested PCR with 16S rRNA revealed characteristic 378 bp bands indicating positive reaction in 8 (20.0%) dogs and sera samples of 21 (52.5%) dogs revealed anti-Ehrlichia antibodies. The dog that revealed organisms in the blood also showed positive results with …


Comparative Evaluation Of Indirect Enzyme Linked Immunosorbent Assay, Rose Bengal Plate Test, Microagglutination Test, And Polymerase Chain Reaction For Diagnosis Of Brucellosis In Buffaloes, Malik Raies Ul Islam, Mohinder Pratap Gupta, Pritam Kaur Sidhu, Gursimran Filia, Hari Mohan Saxena, Tawheed Ahmed Shafi Jan 2013

Comparative Evaluation Of Indirect Enzyme Linked Immunosorbent Assay, Rose Bengal Plate Test, Microagglutination Test, And Polymerase Chain Reaction For Diagnosis Of Brucellosis In Buffaloes, Malik Raies Ul Islam, Mohinder Pratap Gupta, Pritam Kaur Sidhu, Gursimran Filia, Hari Mohan Saxena, Tawheed Ahmed Shafi

Turkish Journal of Veterinary & Animal Sciences

In the present study, 178 blood samples from buffaloes were tested against indirect enzyme linked immunosorbent assay (I-ELISA), rose bengal plate test (RBPT), microagglutination test (MAT), modified microagglutination test (mMAT), and polymerase chain reaction (PCR) to select the most suitable test for efficient and effective diagnosis of bovine brucellosis. Win Episcope 2 software was used to determine the agreement between tests (kappa values at 95% confidence interval). I-ELISA was pair compared with all the other tests. Out of 178 samples, 102 were found positive by I-ELISA, 81 by RBPT, 85 by MAT, 79 by mMAT, and 68 by PCR. Substantial …


Molecular Detection Of Antibiotic Related Genes From Pseudomonas Aeruginosa Fp6, An Antagonist Towards Rhizoctonia Solani And Colletotrichum Gloeosporioides, Sasirekha Bakthavatchalu, Srividya Shivakumar, Shankar Bhat Sullia Jan 2013

Molecular Detection Of Antibiotic Related Genes From Pseudomonas Aeruginosa Fp6, An Antagonist Towards Rhizoctonia Solani And Colletotrichum Gloeosporioides, Sasirekha Bakthavatchalu, Srividya Shivakumar, Shankar Bhat Sullia

Turkish Journal of Biology

Despite the importance of antibiosis in biological control, little is known about the genes involved in antifungal activity. Therefore, the present study was aimed at identifying the location of the antagonistic gene(s) in Pseudomonas aeruginosa FP6 towards Rhizoctonia solani and Colletotrichum gloeosporioides using a PCR-based approach. A new bacterial strain, designated as FP6, was isolated from rhizospheric soil and identified as a member of Pseudomonas aeruginosa based on 16S rRNA analysis. The secondary metabolites produced by this strain have shown broad-spectrum antifungal activity against Rhizoctonia solani and Colletotrichum gloeosporioides. Antifungal metabolites of a nonenzymatic nature were found to be responsible …


Pcr Screening For The Surfactin (Sfp) Gene In Marine Bacillus Strains And Its Molecular Characterization From Bacillus Tequilensis Nios11, Seema Porob, Sagar Nayak, Areena Fernandes, Priyanka Padmanabhan, Balkrishna Arjun Patil, Ram Murti Meena, Nagappa Ramaiah Jan 2013

Pcr Screening For The Surfactin (Sfp) Gene In Marine Bacillus Strains And Its Molecular Characterization From Bacillus Tequilensis Nios11, Seema Porob, Sagar Nayak, Areena Fernandes, Priyanka Padmanabhan, Balkrishna Arjun Patil, Ram Murti Meena, Nagappa Ramaiah

Turkish Journal of Biology

The sfp gene responsible for surfactin production was screened from the DNA extracts of 37 Bacillus spp. whose identity was confirmed by 16S rRNA gene sequence analyses. PCR screening revealed amplification of sfp gene fragments in a total of 25 isolates. Several isolates belonging to Bacillus tequilensis were found to be positive for this gene. A gene fragment coding for the sfp gene was amplified and cloned from genomic DNA of the isolate B. tequilensis NIOS11. The cloned gene has an open reading frame of 675 bp coding for 224 amino acids with a theoretical molecular weight of 26,166.33 Da …


Prevalence Of Escherichia Coli O157 In Red Meat And Meat Products Determined By Vidas Ecpt And Lightcycler Pcr, Seran Temelli̇, Ayşe Gül Eyi̇gör, Şahsene Anar Jan 2012

Prevalence Of Escherichia Coli O157 In Red Meat And Meat Products Determined By Vidas Ecpt And Lightcycler Pcr, Seran Temelli̇, Ayşe Gül Eyi̇gör, Şahsene Anar

Turkish Journal of Veterinary & Animal Sciences

This study aimed to determine the prevalence of Escherichia coli O157 in retail red meat and meat products with the Vitek Immunodiagnostic Assay System, including H7 Escherichia coli phage technology (VIDAS ECPT), and a real-time polymerase chain reaction system (LightCycler PCR; LCPCR). A total of 106 red meat and meat product samples were analyzed with VIDAS ECPT and LCPCR. VIDAS ECPT presumptive positive samples were subjected to VIDAS Immuno Concentration E. coli O157, followed by culture and serology. Among the 27 out of 72 (37.50%) red meat samples and 3 out of 34 (8.82%) red meat products that tested positive …


Toxinotyping Of Clostridium Perfringens Isolates By Elisa And Pcr From Lambs Suspected Of Enterotoxemia, Hasan Hüseyi̇n Hadi̇mli̇, Osman Ergani̇ş, Zafer Sayin, Zeki̇ Aras Jan 2012

Toxinotyping Of Clostridium Perfringens Isolates By Elisa And Pcr From Lambs Suspected Of Enterotoxemia, Hasan Hüseyi̇n Hadi̇mli̇, Osman Ergani̇ş, Zafer Sayin, Zeki̇ Aras

Turkish Journal of Veterinary & Animal Sciences

Clostridium perfringens is a gram-positive, anaerobic bacterium that causes a wide range of diseases in humans and animals. The purposes of this study were to determine, using the enzyme-linked immunosorbent assay (ELISA), the clostridial toxins in intestinal samples of lambs with suspected enterotoxemia; to conduct molecular typing of C. perfringens isolates; and to investigate the presence of the genes of 4 major toxins (\alpha, \beta, \epsilon, and \iota) in the isolates by polymerase chain reaction (PCR). According to the ELISA results, clostridial toxins were determined in 32 intestinal samples. Of the samples, 13 (40.62%) were C. perfringens type A, 1 …


A Preliminary Attempt For Efficient Genetic Transformation And Regeneration Of Legume Mucuna Pruriens L. Mediated By Agrobacterium Tumefaciens, Raghavendra Sathyanarayana, Vadlapudi Kumar, Chapeyl.Kumaran Ramesh, Mahadevappa Paresha, Mahaboob Habeebulla Moinuddin Khan Jan 2012

A Preliminary Attempt For Efficient Genetic Transformation And Regeneration Of Legume Mucuna Pruriens L. Mediated By Agrobacterium Tumefaciens, Raghavendra Sathyanarayana, Vadlapudi Kumar, Chapeyl.Kumaran Ramesh, Mahadevappa Paresha, Mahaboob Habeebulla Moinuddin Khan

Turkish Journal of Biology

Mucuna pruriens belongs to the family Papillonaceae. The seeds and leaves of these plants contain a large amount of L-DOPA. L-DOPA (L-3,4-dihydroxyphenylalanine) is one of the most widely used drugs in the treatment of Parkinson disease. Development of an efficient gene transfer method is an absolute requirement for genetically improving Mucuna pruriens and creating plants with more desirable traits. A simple protocol was developed for the Agrobacterium-mediated stable genetic transformation of M. pruriens. Agrobacterium tumefaciens strain EHA 101, containing the vector pCAMBIA1305 and the hptII and GUS plus genes, was used for the gene transfer experiments. Putative transgenic shoots were …


Evaluation Of Nested Pcr Method For Diagnosis Of Meningitis Due To Neisseria Meningitidis And Haemophilus Influenzae, Zahra Hojjati Bonab, Safar Farajnia, Reza Ghotaslou, Elhameh Nikkhah Jan 2012

Evaluation Of Nested Pcr Method For Diagnosis Of Meningitis Due To Neisseria Meningitidis And Haemophilus Influenzae, Zahra Hojjati Bonab, Safar Farajnia, Reza Ghotaslou, Elhameh Nikkhah

Turkish Journal of Biology

Meningitis due to Neisseria meningitidis and Haemophilus influenzae is a common infectious disease among infants and children that can be fatal in the absence of rapid and proper diagnosis and treatment. Therefore, a rapid and sensitive method for diagnosis is a high priority. The aim of this study was to compare the performance of culture, conventional polymerase chain reaction (PCR), and nested PCR methods for diagnosis of meningitis caused by N. meningitidis and H. influenzae. A total of 106 cerebrospinal fluid samples were collected from infants and children suspected of having meningitis. A portion of these samples were used for …


First Report Of Fasciola Hepatica In Equus Caballus Host Species From Tunisia Based On The Ribosomal Internal Transcribed Spacer Regions, Nabil Amor, Sarra Farjallah, Khaled Said, Badreddine Ben Slimane Jan 2011

First Report Of Fasciola Hepatica In Equus Caballus Host Species From Tunisia Based On The Ribosomal Internal Transcribed Spacer Regions, Nabil Amor, Sarra Farjallah, Khaled Said, Badreddine Ben Slimane

Turkish Journal of Veterinary & Animal Sciences

Fasciolosis caused by Fasciola spp. (Platyhelminthes: Trematoda: Digenea) is considered the most important helminth infection of ruminants in tropical countries, causing considerable socioeconomic problems. Samples identified morphologically as Fasciola sp. in Equus caballus host species from the city of Tunis (north of Tunisia) were genetically characterized, for the first time, by sequences of the 1st (ITS-1), the 5.8S and 2nd (ITS-2) Internal Transcribed Spacers (ITS) of nuclear ribosomal DNA (rDNA). Comparison of the ITS of the Tunisian samples with sequences of Fasciola spp. from GenBank showed that the specimens examined had sequences identical to those of F. hepatica sequences selected …


Exploration Of Genotype Specific Fingerprinting Of Nigella Sativa L. Using Rapd Markers, Muhammad Sajjad Iqbal, Shahid Nadeem, Shahid Mehboob, Abdul Ghafoor, Muhammad Ibrahim Rajoka, Afsari Sharif Qureshi, Bushra Niaz Jan 2011

Exploration Of Genotype Specific Fingerprinting Of Nigella Sativa L. Using Rapd Markers, Muhammad Sajjad Iqbal, Shahid Nadeem, Shahid Mehboob, Abdul Ghafoor, Muhammad Ibrahim Rajoka, Afsari Sharif Qureshi, Bushra Niaz

Turkish Journal of Agriculture and Forestry

Nigella sativa L. has industrial, cosmetic, and pharmaceutical uses but has not been adequately characterized in Pakistan. This investigation was carried out to explore genotype specific fingerprinting of 32 N. sativa L. genotypes based on randomly amplified polymorphic DNA markers. From 58 random primers used, 15 primers generated 249 reproducible and scorable amplification products across all the genotypes, out of which 164 (66%) fragments were polymorphic revealing a high level of polymorphism among these genotypes. The proportion of common bands was low (34%). The size of the amplification products on agarose gels ranged between 0.5 and 10.0 kb. In 13 …


Maedi-Visna Virus Infection In A Merino Lamb With Nervous Signs, Ahmet Akkoç, Meri̇ç Kocatürk, Ayli̇n Alasonyalilar Demi̇rer, Sezgi̇n Şentürk, Giacomo Renzoni, Silvia Preziuso Jan 2011

Maedi-Visna Virus Infection In A Merino Lamb With Nervous Signs, Ahmet Akkoç, Meri̇ç Kocatürk, Ayli̇n Alasonyalilar Demi̇rer, Sezgi̇n Şentürk, Giacomo Renzoni, Silvia Preziuso

Turkish Journal of Veterinary & Animal Sciences

A Maedi-Visna virus (MVV) infection was diagnosed in a 10-month-old lamb from a Turkish flock. The animal suddenly showed nervous signs and died within 2 days. At necropsy, different pulmonary and nervous lesions were observed. A Coenurus cerebralis cyst was also present in the right-brain hemisphere. Severe nonpurulent meningoencephalitis and lymphoproliferative pneumonia were detected by histopathology. MVV proviral DNA was demonstrated by polymerase chain reaction (PCR) in formalin-fixed and paraffin-embedded samples collected from the brain and the lungs. This unusual report in a young animal confirms that not only adult sheep but also lambs can develop MVV disease. The hypothesis …