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Full-Text Articles in Life Sciences

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield May 2022

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield

Biological Sciences Undergraduate Honors Theses

Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …


Of Biodiversity, Boundaries, And Distribution: The Myxomycetes Of The Philippines And Beyond, Sittie Aisha Bustamante Macabago Jan 2021

Of Biodiversity, Boundaries, And Distribution: The Myxomycetes Of The Philippines And Beyond, Sittie Aisha Bustamante Macabago

Graduate Theses and Dissertations

This dissertation contains a compilation of independently performed studies primarily focusing on the myxomycetes (plasmodial slime molds) from the Philippines and integrating local and worldwide data to demonstrate regional and global trends. The major themes include the following: (I) a review of the diverse group of spore-producing amoeboid protists, including the myxomycetes; (II-IV) diversity assessments in three different groups of islands in the Philippine archipelago; (V) mapping the myxomycetes found in the Philippines for databasing and analyzing the geocoded data; (VI) a study on regional boundaries, including the Philippines, using myxomycete species composition; and, (VII) creating a global species distribution …


Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal Dec 2020

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …


Diatom Voucher Flora And Comparison Of Collection Methods For Biodiversity Hotspot Upper Three Runs Creek, Katie M. Johnson Mar 2020

Diatom Voucher Flora And Comparison Of Collection Methods For Biodiversity Hotspot Upper Three Runs Creek, Katie M. Johnson

Biology Theses

Surface freshwater is a scarce resource. Due to the scarcity and necessity of this resource, it is imperative that its quality is routinely monitored. One way of monitoring water quality is through biological assessments, which include examining algal assemblages. Regionally, little remains known of algal taxa in the southeastern United States. In the past, the Academy of Natural Sciences of Philadelphia (ANSP) conducted biological assessments along the Savannah River finding Gomphonema parvulum (Kützing) Kützing 1849 to be a dominant taxon rendering assessments inconclusive. Recent studies have provided evidence that species complexes and semi-cryptic taxa have been identified within the Gomphonema …


Mammal Species Inventory Using Various Trapping Methods In Zone 4 Of Billy Barquedier National Park, Belize During Rainy Season, Mersady Redding Dec 2019

Mammal Species Inventory Using Various Trapping Methods In Zone 4 Of Billy Barquedier National Park, Belize During Rainy Season, Mersady Redding

Animal Science Undergraduate Honors Theses

Belize is a small country, but it is extremely ecologically diverse. Based on the few studies conducted in Belize, the abundance of mammals is low but diversity is high. Particular findings note the number and identity of species differed between four sites in the Maya Mountains of Belize, indicating that a data set from a single site is not representative of the Neotropical region. Insufficient data is available to estimate current species richness of many areas in Belize, including Billy Barquedier National Park (BBNP). The objective of this study was to explore trapping and documentation methods of terrestrial mammals in …


Geographic Population Structure And Taxonomic Identity Of Rhinichthys Osculus, The Santa Ana Speckled Dace, As Elucidated By Nuclear Dna Intron Sequencing, Liane Raynette Greaver Sep 2019

Geographic Population Structure And Taxonomic Identity Of Rhinichthys Osculus, The Santa Ana Speckled Dace, As Elucidated By Nuclear Dna Intron Sequencing, Liane Raynette Greaver

Electronic Theses, Projects, and Dissertations

Rhinichthys osculus (Cyprinidae), the speckled dace, is the most widely distributed freshwater fish in the western United States. The southern California populations of R. osculus are identified as the Santa Ana speckled dace (SASD), though the SASD has not yet been formally recognized as a distinct taxon. Current mtDNA analysis performed in the Metcalf Lab has shown a reciprocally monophyletic relationship among three California regions; southern, central coast, and Owens Valley. Similarly, microsatellite genotyping has shown significant levels of geographic population structure. The purpose of this study was to provide nuclear DNA sequence data to determine the taxonomic status of …


Where Birds Chill: An Assessment Of The Habitat Preferences Of Birds Overwintering In Hudson Valley Forests, Elizabeth Claire Axley Jan 2019

Where Birds Chill: An Assessment Of The Habitat Preferences Of Birds Overwintering In Hudson Valley Forests, Elizabeth Claire Axley

Senior Projects Spring 2019

Many avian species overwinter in eastern North America; however, studies on bird populations are rarely undertaken during this critical survival time, and little is known as to their habitat preferences and foraging behavior. In this observational study, we performed a survey of birds overwintering in the Hudson Valley’s temperate, primarily-deciduous forests, assessing avian populations’ habitat preferences through the vegetative structural variables surrounding overwintering birds as they forage. Our results suggest that high canopy cover is critically important to predicting overwintering bird occupancy on a microhabitat scale. Moreover, overwintering birds preferentially occupy forest plots not dominated by sugar maples, in spite …


Understanding The Impacts Of Current And Future Environmental Variation On Central African Amphibian Biodiversity, Courtney A. Miller Dec 2018

Understanding The Impacts Of Current And Future Environmental Variation On Central African Amphibian Biodiversity, Courtney A. Miller

University of New Orleans Theses and Dissertations

Global climate change is projected to impact multiple levels of biodiversity by imposing strong selection pressures on existing populations, triggering shifts in species distributions, and reorganizing entire communities. The Lower Guineo-Congolian region in central Africa, a reservoir for amphibian diversity, is predicted to be severely affected by future climate change through rising temperatures and greater variability in rainfall. Geospatial modelling can be used to assess how environmental variation shapes patterns of biological variation – from the genomic to the community level – and use these associations to predict patterns of biological change across space and time. The overall goal of …


Lichen Conservation In Eastern North America: Population Genomics, Climate Change, And Translocations, Jessica Allen Jun 2017

Lichen Conservation In Eastern North America: Population Genomics, Climate Change, And Translocations, Jessica Allen

Dissertations, Theses, and Capstone Projects

Conservation biology is a scientific discipline that draws on methods from diverse fields to address specific conservation concerns and inform conservation actions. This field is overwhelmingly focused on charismatic animals and vascular plants, often ignoring other diverse and ecologically important groups. This trend is slowly changing in some ways; for example, increasing number of fungal species are being added to the IUCN Red-List. However, a strong taxonomic bias still exists. Here I contribute four research chapters to further the conservation of lichens, one group of frequently overlooked organisms. I address specific conservation concerns in eastern North America using modern methods. …


The Effects Of Disturbance And Species Specific Interactions On Diversity In An Agent Based Forest Simulation, Matthew E. Mills Jan 2017

The Effects Of Disturbance And Species Specific Interactions On Diversity In An Agent Based Forest Simulation, Matthew E. Mills

Theses and Dissertations

In ecology literature, there is much data which suggests that conspecific negative density dependence (CNDD) and abiotic disturbances increase biodiversity in forests. This thesis elucidates the notion that not only do these two forces increase diversity, but they may also interact with one another in order to achieve higher levels of biodiversity. Abiotic disturbances, like fires and hurricanes, can indirectly impact conspecific effects because when these forces remove individuals from the landscape, the role of the conspecific effects will change. The interaction of these two factors in biodiversity are explored in an agent based forest simulation through a resource surface. …


Effect Of The 2013-2015 California Drought On Small Mammal Abundance And Diversity In Chaparral, Oak Woodland And Riparian Habitats, Nicole Desideri Jun 2016

Effect Of The 2013-2015 California Drought On Small Mammal Abundance And Diversity In Chaparral, Oak Woodland And Riparian Habitats, Nicole Desideri

Biological Sciences

Long-term biodiversity surveys are a useful tool for assessing the impacts of stochastic events on wildlife and their communities. A recent stochastic event to affect the state of California is the historic 2013-2015 drought. This drought, described as a one-in-one-thousand year event, brought precipitation to a historic low; the statewide rainfall reaching 34% below average (Swain et al. 2014). While humans are feeling the impact of this water shortage, the effects on native ecosystems and wildlife populations are poorly documented. Baseline small mammal biodiversity data collected in 2011, before the drought, allows us the opportunity to study the impacts of …


Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro May 2016

Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro

Undergraduate Honors Theses

Armored scale insects (Hemiptera: Diaspididae) are some of the most invasive insects in the world. These cryptic plant parasites are most often encountered in managed agricultural ecosystems, but very little is known about their distribution, abundance, and diversity in tropical rainforest canopies, where they are likely to have their highest diversity. Because these ubiquitous insects are extreme generalists with undirected dispersal, their diversity (alpha and beta) accumulation can conceivably be modeled according to tenets derived from island biogeography theory. For example, one expectation is that older established trees should boast a higher species diversity and abundance than younger ones. Other …