Life Sciences Commons^™

Breeding For Modified Seed Composition In Soybean: Selection Of Genotypes, Yield Stability, And Environmental Effects, Luciano Miguel Jaureguy

Graduate Theses and Dissertations

The development of cultivars with modified seed composition represents an excellent alternative to cope with the world's need for more nutritious food. Understanding the genetic and environmental factors controlling crop seed quality traits is of crucial importance for such an endeavor. The objectives of this study were: a) to evaluate the efficiency of phenotype and marker-assisted selection for low stachyose and low phytate soybean breeding lines, and their yield stability, b) to study the effect of management practices planting date and delayed harvest on soybean seed composition, and c) to study the potential association between soil properties and leaf chemical …

Community Structure And Ecological Specialization In Plant-Ant Interactions, Paola Barriga

Graduate Theses and Dissertations

Positive associations among species have contributed to the maintenance of biodiversity. These interactions are typically studied in pairwise fashion where two interacting organisms are the focus. This dissertation uses network theory to analyze positive plant-ant associations in three Neotropical forests. Obligate plant-ant mutualisms were used, where plants host the ants in domatia and provide food bodies while the ants protect the plants and can feed them. A network approach was used to depict all obligate plant-ant interactions within a community. The main questions asked at the community level were: 1) Do network structure and levels of specialization change geographically and, …

Characterization And Epidemiology Of Soybean Vein Necrosis Associated Virus, Jing Zhou

Graduate Theses and Dissertations

Soybean vein necrosis disease (SVND) is widespread in major soybean-producing areas in the U.S. The typical disease symptoms exhibit as vein clearing along the main vein, which turn into chlorosis or necrosis as season progresses. Double-stranded RNA isolation and shot gun cloning of symptomatic tissues revealed the presence of a new tospovirus, provisionally named as Soybean vein necrosis associated virus (SVNaV). The presence of the virus has been confirmed in 12 states: Arkansas, Illinois, Missouri, Kansas, Tennessee, Kentucky, Mississippi, Maryland, Delaware, Virginia and New York. Symptomatic samples collected from eight states (AR, IL, MO, MS, KS, TN, MD and DE), …

Effects Of Associated Subcortical Beetles On Oviposition Behavior And Early-Stage Survival Of Sirex Nigricornis F. (Hymenoptera: Siricidae), Ace J. Lynn-Miller

Graduate Theses and Dissertations

Sirex (Hymenoptera: Siricidae) woodwasps develop within xylem of host conifers. Sirex females drill through the bark, phloem and into xylem tissues where they deposit eggs along with a symbiotic Amylostereum fungus. The presence of Amylostereum is necessary for successful development of Sirex immatures as the larvae are unable to derive adequate nutrition from xylem in the absence of the fungus. The Eurasian woodwasp, Sirex noctilio F., was discovered in northeastern North America in 2004. Sirex noctilio has caused significant economic damage in Pinus radiata D. Don plantations of the southern hemisphere, but is of little economic significance in its native …

The Biological Control Of Spotted Knapweed In The Southeastern United States, Carey R. Minteer

Graduate Theses and Dissertations

Spotted knapweed is an invasive, short-term-perennial plant that is native to Eurasia. It was accidentally introduced into North America in the early 1890's and has since spread across The United States and Canada. Spotted knapweed degrades rangelands and pastures by negatively impacting native plants, increasing soil surface runoff and stream sediment yields, and reducing soil infiltration. A biological control program for spotted knapweed using Larinus minutus (Coleoptera: Curculionidae), was initiated in Arkansas in 2008. In this dissertation I described the releases of L. minutus and investigated the adult activity in the southeastern United States (Chapter 1), investigated the effects of …

False Smut Of Rice: Histological Analysis Of Infection, Liem Thi Thanh Nguyen

Graduate Theses and Dissertations

False smut of rice, caused by Ustilaginoidea virens (Cooke) Takahashi (Teleomorph: Villosiclava virens), has become a common disease in most major rice growing regions throughout the world. Considerable confusion exists regarding the infection process and the disease cycle. Therefore, a clearer understanding of pathogenesis caused by Ustilaginoidea virens is critical for future efforts to develop genetic and chemical tools to manage false smut in Arkansas and other regions of the world. The overall goal of this research was to clarify the infection process underlying false smut, with emphasis on comparing and contrasting the histological basis of root and foliar infections. …

Evaluation Of The Recombination Efficiencies Of Flp Proteins, Linh Duy Nguyen

Graduate Theses and Dissertations

Site-specific recombination systems are powerful tools for genetic modification. They have been used to integrate a transgene into a pre-defined locus and to remove marker genes from a transgene locus. Two of the most widely used site-specific recombination systems in plants are the Cre/lox system from the bacteriophage P1 and the FLP/FRT system from the yeast Saccharomyces cerevisiae. The Cre/lox system is well-characterized and is the first choice in application of site-specific recombination system. However, some applications such as marker-free site-specific gene integration require the use of two recombination systems. In addition, the availability of alternative recombination systems can offer …

Effects Of Felled Shortleaf Pine (Pinus Echinata Mill.) Moisture Loss On Oviposition Preferences And Survival Of Sirex Nigricornis F. (Hymenoptera: Siricidae), Jessica Hartshorn

Graduate Theses and Dissertations

The European woodwasp, Sirex noctilio F. (Hymenoptera: Siricidae) utilizes pine as its host during larval development. Females drill through pine bark to deposit eggs, a symbiotic fungus, Amylostereum, and phytotoxic mucus into the tree. In their native range, these insects are not viewed as primary pests because they attack dead or dying trees. Over the last century, this woodwasp has been accidentally introduced into several countries in the southern hemisphere. Some regions have incurred millions of dollars in damage to large plantations of the widely planted pine species, radiata pine (Pinus radiata D. Don). Sirex noctilio was discovered …

Taxonomy And Dna Barcoding In The Genus Manfreda (Salisb.) Asparagaceae, William David Ritchie

Graduate Theses and Dissertations

The genus Manfreda Salisb. of Asparagaceae is a genus of potential horticultural interest and is currently subject to breeding efforts at the University of Arkansas. A lack of taxonomic clarity however undermines the classification of potential inter - and intrageneric hybrids. The study aims to assess existing species delimitation within the genus Manfreda employing morphology while investigating the potential utility of Consortium for the Barcode of Life Plant (CBOL) DNA Barcodes for identification of specific taxa and an External Transcribed Spacer (ETS) - Internal Transcribed Spacer (ITS) DNA barcode for developed hybridized taxa.

Observation of 855 herbarium specimens facilitated phylogenetic …

Alternative Herbicide Control Options For Glyphosate-Resistant Palmer Amaranth (Amaranthus Palmeri), George Macmillan Botha

Graduate Theses and Dissertations

The occurrence of glyphosate-resistant (GR) Palmer amaranth has prompted a shift in weed management strategies worldwide. Studies were conducted with the aim to (1) establish and compare the degree of tolerance of GR Palmer amaranth populations; (2) assess the efficacy of glufosinate, tembotrione, 2,4-D or dicamba, applied alone or tank-mixed, on Palmer amaranth with higher tolerance to glufosinate in the greenhouse and corn field, and (3) establish the mechanism involved in the tolerance of Palmer amaranth to glufosinate. Tembotrione, 2,4-D, dicamba, and glufosinate applied at 1x controlled 80 to 100%, 98 to 100%, 84 to 100%, and 94 to 100% …

Meta-Analysis Of Wheat Qtl Regions Associated With Heat And Drought Stress, Marlovi Andrea Acuna Galindo

Graduate Theses and Dissertations

Heat and drought are the two most important environmental constraints to wheat production globally, are often present simultaneously and will become more severe with global climate change. This presents a unique challenge to wheat scientists who must work to develop wheat cultivars that are productive and adapted to future environmental conditions. A number of recent studies have reported quantitative trait loci (QTL) associated with heat and drought tolerance, as well as QTL for stress adaptive traits such as the availability of stem carbohydrates or crop canopy temperature. The objective of this study was to perform a meta-analysis of these QTL …

Long-Term Effects Of Rice Rotation, Tillage, And Fertility On Near-Surface Soil Carbon And Nitrogen Cycling, Jill Marie Motschenbacher

Graduate Theses and Dissertations

Rice (Oryza sativa L.)-based cropping systems are different from other row crops due to the flood-irrigation scheme used from about one month after planting to a few weeks prior to harvest. The frequent cycling between anaerobic (i.e., flooding during the growing season) and aerobic (i.e., generally, the remainder of the year) conditions can influence the rate of soil organic matter (SOM) decomposition, which can greatly influence carbon (C) and nitrogen (N) storage and sequestration in the soil over time. Therefore, a study was conducted on a silt-loam soil (fine, smectitic, thermic, Typic Albaqualf) at the Rice Research and Extension Center …

Effects Of Meloidogyne Incognita, Soil Physical Parameters, And Thielaviopsis Basicola On Cotton Root Architecture And Plant Growth, Jianbing Ma

Graduate Theses and Dissertations

The root-knot nematode, Meloidogyne incognita, and the seedling pathogen, Thielaviopsis basicola, commonly co-exist in Arkansas cotton fields and may interact resulting in increased losses. The primary objective of this research was to evaluate the effects of soil physical parameters on these soilborne pathogens and cotton growth in controlled environmental, field, and microplot studies. Controlled environmental experiments used two soil bulk densities and four pathogen treatments: non-infested soil, soil infested with M. incognita or T. basicola and soil infested with both pathogens. The results indicated bulk density generally did not affect seedling growth or disease since soils had low penetration resistance …

Effects Of Environment And Genotype On Charcoal Rot Development On Soybeans, Micah Diane Doubledee

Graduate Theses and Dissertations

Charcoal rot of soybean, caused by the soilborne fungus Macrophomina phaseolina (Tassi) Goid, is a disease associated with high soil temperature and low soil moisture. Above-ground symptoms, which can be difficult to distinguish from drought symptoms, include low vigor, dead leaves that remain attached to the plant, early senescence and yield loss. Irrigation limits damage, but does not prevent colonization of the tissue by the pathogen. No soybean line is immune to M. phaseolina, but a few lines may have moderate resistance. The objectives of this research were to 1) determine the effects of genotype and drought on the development …

Flight Period And Species Composition Of Sirex (Hymenoptera: Siricidae) And Associated Deladenus (Nematoda: Neotylenchidae) Within Arkansas Pine Forests, Danielle Keeler

Graduate Theses and Dissertations

The European woodwasp, Sirex noctilio F. (Hymenoptera: Siricidae), which is a known destructive pest of pine in the southern hemisphere was recently discovered in the eastern United States. Before we can understand how S. noctilio may affect pine forests throughout the United States, we need a better understanding of native Sirex and the role they play in the ecosystem. The objectives of this research were to 1) determine species composition and flight period for native Sirex; 2) confirm presence of parasitic nematodes, Deladenus (Nematoda: Neotylenchidae), within adult Sirex; 3) investigate Deladenus parasitism rates; 4) verify the number of Deladenus species …

Genetic Diversity, Pathogenicity/Virulence Variation And Population Structure Of Rhizoctonia Spp. Associated With Rice Sheath Blight In Arkansas And Qtl Mapping For Disease Resistance, Vanina Lilian Castroagudin

Graduate Theses and Dissertations

Rice sheath blight (ShB) is one of the most prevalent diseases in rice. The significance of this disease is increasing due to more intensive production practices globally. Rhizoctonia solani Kühn AG 1 - IA [teleomorph: Thanatephorus cucumeris (A.B. Frank) Donk] is considered the primary ShB pathogen of rice. However, Rhizoctonia oryzae-sativae, Rhizoctonia oryzae, and R. solani AG 2 and AG 11, have also been isolated from sheath blight-like lesions on rice.Up to now, there is little information on genetic diversity and patterns of molecular evolution of the fungus, and there is no study on the structure of the R. solani …

The Evolution Of Natural Plant Communities Through Crop Migration And Crop-To-Weed Gene Flow, Meredith G. Schafer

Graduate Theses and Dissertations

With the rising demand for food and biofuels, the efficiency of crop production has become vital to assuring food security. Genetically engineered (GE) crop varieties are broadly thought to be a solution for improving the efficiency of crop production, but concerns regarding their release have heightened as more discoveries have focused on the influence of genetically engineered crops on native and weedy plant species. Risk assessment of GE crop varieties focuses on two main areas: feralization of crop systems and crop-weed hybridization. Risks include naturalization, transgene introgression, and the formation of novel genotypes in natural systems. In this study, roadside …

The Potential Environmental Benefits Of Hybrid Rice Varieties, Haxhire Myrteza

Graduate Theses and Dissertations

With water insufficiency being already a major issue and potential carbon policies on greenhouse gas (GHG) emissions, Arkansas rice producers may need to undergo some changes in regards to rice cultivar selection. The purpose of this study is to estimate the environmental benefits of cultivating hybrid rice varieties as opposed to conventional and Clearfield rice varieties. To accomplish this goal, water use and GHG emissions were estimated on per acre (ac) and per bushel (bu) basis for most commonly cultivated rice varieties in Arkansas. The study focuses particularly on six main rice stations in the State of Arkansas. The hypothesis …

The Identification Of Quantitative Trait Loci For Sucrose And Stachyose Content In Soybean Seed, Ailan Zeng

Graduate Theses and Dissertations

Sucrose is a desirable sugar in soybean seed that affects the quality and taste of soyfoods, while stachyose is a non-digestible sugar that induces flatulence in non-ruminant animals. Therefore, soybean cultivars with high sucrose and/or low stachyose would be valuable for soyfood and meal markets. The objectives of this study were to identify quantitative trait loci (QTL) or genes associated with seed sucrose and stachyose content using simple sequence repeat (SSR) or single nucleotide polymorphism (SNP) markers. A low sucrose line, MFS-553, was crossed with a high sucrose plant introduction, PI 243545, to develop the sucrose QTL mapping population. A …

Soybean Maturity Group Tradeoffs: Irrigation, Weed Control, And Nitrogen Fixation, Ryan Wegerer

Graduate Theses and Dissertations

This thesis is divided into four chapters. Chapter I introduces the rationale behind the study and gives a brief overview of the overall study covering weed control, irrigation needs and nitrogen fixation amounts across soybean maturity group. Chapter II will go into further detail outlining the first applied experiment dealing with weed control and irrigation issues. Alternative weed control methods are analyzed in conjunction with irrigation risk analysis across soybean maturity group in response to agricultural issues of glyphosate resistance and declining ground water supply in the Arkansas delta region. Chapter III will jointly examine irrigation application amounts and nitrogen …

Evaluation Of Isothiocyanates And Herbicide Programs As Methyl Bromide Alternatives For Weed Control In Polyethylene-Mulched Tomato And Bell Pepper, Pratap Devkota

Graduate Theses and Dissertations

Methyl bromide (MeBr), a Class I ozone –depleting substance, has been banned for ordinary agricultural uses. In the absence of an effective MeBr alternative, weed control is a major challenge for commercial tomato and bell pepper production. Field trials were conducted at Fayetteville, AR, to compare allyl isothiocyanate (ITC), metam sodium, and herbicide programs with the standard MeBr application (mixture of MeBr plus chloropicrin at 67% plus 33%, respectively, hereafter referred to as MeBr) for crop injury, weed control, viable yellow nutsedge tubers, and marketable yield in low–density polyethylene (LDPE) mulched tomato and bell pepper production. In addition, herbicide programs …

The Impact Of Selected Forage Legumes On Cattle Performance, Forage Production, And Soil Quality, And Evaluation Of Legume Persistence Under Grazing, Bradley Edward Briggs

Graduate Theses and Dissertations

Interest in substituting legumes for N fertilizer in beef cattle grazing systems has recently increased with rising fertilizer prices. Legumes are well known for their ability to fix atmospheric N and decrease dependence on input of N fertilizer. However, there are still difficulties associated with legume utilization including establishment and persistence. Two experiments were conducted to evaluate legume performance under herbivory. The objective of Experiment 1 was to compare forage production and beef cattle gains from annual ryegrass [Lolium multiflorum (L.)] and bermudagrass [Cynodon dactylon (L.) Pers.] pastures fertilized with N or overseeded with legumes. Gelbvieh × Angus …

Genotypic And Phenotypic Diversity Of Pyricularia Oryzae In The Contemporary Rice Blast Pathogen Population In Arkansas, Lu Zhai

Graduate Theses and Dissertations

Rice blast, caused by Pyricularia oryzae (teleomorph: Magnaporthe grisea), is one of the most economically important diseases of rice worldwide, including Arkansas. Rice blast has been severe the past few years on conventional cultivars and, more recently, has been observed on hybrid rice cultivars. The first objective of the current research was to examine the genotypic and phenotypic variation in the P. oryzae population in Arkansas during the 2009, 2010, and 2011 growing seasons and compare isolates from conventional cultivars with those from and hybrids. A total of 904 isolates were recovered from symptomatic rice cultivars in Arkansas and …

Multifunctionality In U.S. Rice Production: A Logit Analysis In Farmers Participation, Juan Tur Cardona

Graduate Theses and Dissertations

Multifunctional agriculture is particularly fundamental to some working lands conservation policies and programs, such as the Environmental Quality Incentive Program (EQIP), Conservation Security Program (CSP) and Wildlife Habitat Incentive Program (WHIP). Farmers can also be engaged in providing recreational and agri-tourism services such as hunting, fishing, bird-watching, farm tours, petting zoos and hospitality services. Using the Agricultural Resource Management Survey (ARMS) we analyze factors associated with participation in conservation, recreation and agri-tourism activities as a function of farm structure, farm financial measures, production practices, and socio-demographic characteristics of the farm operator. To estimate the functional relationships we estimate a binary …

The Role Of Ascorbic Acid In The Plant-Herbivore Interaction, Kelly Ann Carruthers

Graduate Theses and Dissertations

Ascorbic acid (AsA), vitamin C, is an important molecule that is vital for both human and plant health, because it aids in the detoxification of reactive oxygen species (ROS) caused by various abiotic and biotic stresses including UV, salinity, ozone, and attack from pathogens In order to understand the role of AsA in the plant-herbivore interaction, we looked at the effects of the wound-responsive hormones, jasmonate, wounding, and herbivory on AsA content. Our study is the first to directly compare the effects of wounding and jasmonates on AsA levels in plants. We looked at the effects of wounding and methyl …

Herbicide Resistance Mechanism(S) In Italian Ryegrass (Lolium Perenne Ssp. Multiflorum) Populations In The Southern United States, Reiofeli Algodon Salas

Graduate Theses and Dissertations

Italian ryegrass is a principal weed problem in wheat production fields in the Southern US. Resistance to herbicides diclofop, mesosulfuron, and pinoxaden among ryegrass populations has been reported. Glyphosate-resistant Italian ryegrass populations were identified in Desha County, Arkansas. This research aimed to 1) determine resistance patterns to ACCase (diclofop and pinoxaden) and ALS (imazamox, mesosulfuron, and pyroxsulam) herbicides among Italian ryegrass populations from the southern US; 2) determine if cytochrome P450-mediated enhanced herbicide metabolism contributed to resistance; and 3) elucidate the resistance mechanism to glyphosate in four Arkansas populations (Des03, Des05, Des14, and D8). For objective 1, 30 accessions from …

Effect Of Water-Deficit Stress On Cotton During Reproductive Development, Dimitra Loka

Graduate Theses and Dissertations

Water deficit is a major abiotic factor limiting plant growth and crop productivity around the world. Cotton (Gossypium hirsutum L.) is considered to be relatively tolerant to drought and the effects of water stress on leaf physiology and metabolism have been extensively documented. However, information is lacking on the effect of water-deficit stress on the cotton flower. It was hypothesized that water-deficit stress would impair gas exchange functions which consequently would result in perturbation of carbohydrates of cotton reproductive units. To investigate this hypothesis growth room studies and field studies were conducted with the objectives being to document the physiological …

Early Season Population Dynamics And Residual Insecticide Effects On Bird Cherry-Oat Aphid, Rhopalosiphum Padi In Arkansas Winter Wheat, Beven Mcwilliams

Graduate Theses and Dissertations

Bird cherry-oat aphid is a common pest of Arkansas winter wheat. This aphid vectors barley yellow dwarf virus which may cause extensive crop damage and yield loss when wheat is infested by virulent aphids in the fall. Some suggest this damage may be avoided using insecticide seed treatments if growers are unable to delay planting, as is recommended. Field population dynamics of bird cherry-oat aphid during fall 2009 and 2010 was assessed through random sampling of whole plants and pan trapping methods to evaluate aphid immigration. The field plots were divided into four subplots treated with a systemic insecticide seed …

Establishment Method And Cultural Practice Effects On Sports Turf, Josh Anderson

Graduate Theses and Dissertations

The use of soil-based sod on sand-based rootzones for the establishment of sports fields and golf courses is a common occurrence. Furthermore, the use of soil-based sod on sand-based rootzones can lead to potential problems associated with decreased water infiltration, gas exchange, rooting, and turfgrass quality caused by soil layering. Core-aerification and sand topdressing may help alleviate the problems associated with soil layering from the use of soil-based sod on sand-based rootzones. Therefore, the objectives of this research were to evaluate the effects of sod establishment methods and post- establishment cultural practices on the infiltration rate, moisture content, divot resistance, …

Distribution And Control Of Herbicide-Resistant Italian Ryegrass (Lolium Perenne L. Ssp. Multiflorum Lam. Husnot) In Arkansas, James Walker Dickson

Graduate Theses and Dissertations

Italian ryegrass populations have evolved resistance to herbicides that producers rely on for weed control both in wheat and burn-down. The objectives of this research were to: test populations of Italian ryegrass from across Arkansas for resistance to glyphosate, diclofop, pinoxaden, and pyroxsulam; determine if there were any differences in control of 12 glyphosate-resistant populations in relation to glyphosate rate or application timing; determine the level of glyphosate resistance in one selected population versus a susceptible standard and a previously discovered glyphosate-resistant population; and determine the best options for controlling Italian ryegrass prior to planting crops. A total of 215 …