Life Sciences Commons^™

Bioregenerative Dietary Supplementation: Optimizing Brassica Production For Space Travel Through Light Intensity, Photoperiod, And Harvest Methodology, Ethan W. Darby

Masters Theses

Bioregenerative dietary supplementation, a component of bioregenerative life support, will be necessary for the success of future exploration-length space endeavors. Plants, as autotrophic producers of calories, nutrients, and oxygen, will be indispensable in the development of these systems. Previous work has identified leafy greens from the genus Brassica as promising candidates for in-flight production of necessary human nutrients such as vitamins C, B₁, and K₁, in addition to β-carotene, the primary vitamin A precursor in the human diet. These plants also produce lutein and zeaxanthin, two compounds important in protecting the eye from radiation-induced damage, as …

Establishing And Optimization Of Tissue Culture Work With Erigeron Canadensis, Robert Petursson

Masters Theses

Glyphosate resistance among weed species has been an increasing problem in crop production over the past two decades. Glyphosate resistant Erigeron canadensis (horseweed) has been found on multiple continents and 20 U.S. states. It appears that the resistance is of non-target type, with mechanisms of action that have yet to be elucidated at the gene level. For the first portion of the study, I focused on reproducing the original indirect organogenesis protocol but discovered biotype variability can influence regeneration success. An improved indirect organogenesis method was then developed using the previously published methods that could be used across biotypes. A …

A Robust Agroinfiltration Method, Bryce N. Trull

Masters Theses

Stable transformation of soybean (Glycine max) is a markedly slow and laborious process. Thus, a tool that enables rapid evaluation of genetic elements in planta is critical to advance complex research and genetic engineering in soybean. To that end, a substantially robust agroinfiltration method was innovated in this work. Agroinfiltration is a technique that leverages Agrobacterium-mediated transient transformation to deliver genetic elements to the cells of whole plant tissues, usually leaves. Several factors were found to be relevant to successful soybean leaf agroinfiltration, including genotype, surfactant, developmental stage, and Agrobacterium culture medium. The research represents not only …

Impact Of Cover Crop Species Diversity On Soil Nutrient Availability And Crop Productivity, Amanda Kramer

Masters Theses

Cover crops provide multiple environmental benefits that improve both soil and water quality; however, farmers only utilize them on approximately 5% of harvested U.S. cropland. Low adoption rates are attributed to yield impact concerns, seed and planting costs, and lack of advocacy. This study, which began in October 2019, assessed the effects of nitrogen rate and cover crop diversity on weed biomass, soil coverage, in-situ residue decomposition, soil nitrogen and phosphorus availability, and cash crop yield to better understand the costs and benefits of cover crop adoption at two locations in Tennessee (Milan and Spring Hill). Treatments were replicated 4 …

Agronomic And Economic Comparison Of Potential Winter Oilseed Species And Varieties For Tennessee, Stefanie B. Keadle

Masters Theses

Winter oilseed crops are annual cool season Brassica crops which fit well within typical corn and soybean rotations. They are currently being adopted in Midwestern conventional agriculture systems. The ability to produce sustainable aviation fuel (SAF) from oil pressed from the seeds is the driving force of recent interest in the crops. The three main crops of interest in this study are canola (Brassica napus), pennycress (Thlaspi arvense L.), and camelina (Camelina sativa). To determine if production of winter oilseeds is feasible in Tennessee, three experiments were conducted. First, a field study variety trial was …

Fungicide Sensitivity, Race Structure, And Host Pathogenicity Of Phytophthora Nicotianae In Tennessee And North Carolina, Taylor Giovanna Miller

Masters Theses

Phytophthora nicotianae, a hemibiotrophic oomycete, is the causal agent of disease of over 300 hosts, notably tobacco, tomato, citrus, strawberry, and ornamentals. Black shank of tobacco is a devastating disease that can result in up to 100% yield loss if left untreated, and buckeye rot of tomato compromises the marketability and yield of fruit impacted by P. nicotianae. Black shank and buckeye rot have been reported throughout the state of Tennessee, and the goal of this work was to analyze fungicide sensitivity of P. nicotianae isolated from tobacco and tomato, characterize the race structure of P. nicotianae, …

Evaluating Current And Future Potential Distribution Of Epiphytic Orchids In The Congo Basin With Ecological Niche Models, Michael L. Ngoh

Masters Theses

The Congo Basin Forest harbors a rich diversity of epiphytic communities, with the Orchidaceae alone making up more than 50% of all epiphytes in the region. Despite the huge diversity of epiphytes, many species, including epiphytic orchids, are at risk to a diverse array of threats. Climate change for instance poses severe threats to epiphytic orchids due to elevated temperatures, prolonged periods of droughts, as well as reduced rainfall across the Congo Basin Forest. In this study, we used ecological niche modeling and GIS techniques to identify spatial patterns of species richness, potential future climate refugia, and novel climatic suitability …

A Bioassay To Determine Poa Annua Responses To Indaziflam, Benjamin D. Pritchard

Masters Theses

Herbicide resistance within Poa annua is widespread in managed turfgrass systems. In 2020, a P. annua collection from a golf course in the southeastern United States was reported to be resistant to indaziflam as well as six other mode-of-action groups. Considering P. annua is the most troublesome weed in turfgrass, a bioassay to screen other collections with putative indaziflam resistance is needed. A dose-response experiment was conducted with ten concentrations of indaziflam (0, 250, 500, 750, 1000, 1250, 1500, 2000, 4500, and 9000 pM) in Gelrite® culture during 2021 and 2022. An herbicide-susceptible (S1) collection of P. annua, a …

Improving Water And Plant Growth Regulator (Pgr) Management Practices In Cotton: Cultivar Physiological Responses And Pgr Rates, Kurt Wedegaertner

Masters Theses

Cotton (Gossypium hirsutum L.) is grown in an increasingly unpredictable climate and often under rainfed conditions. Without irrigation to alleviate common drought conditions, cultivar selection becomes a primary tool in mitigating the negative effects of water-deficit stress. Cultivars can differ in water use under water-limited environments, which can affect crop performance. Moreover, cotton management must involve balancing vegetative and reproductive growth through the use of plant growth regulators (PGR) due to the plant’s perennial growth pattern. The efficacy of PGRs are dependent on many variables including environmental conditions, irrigation, and genetics (cultivar). In 2020 and 2021, a series of …

Molecular Markers Within And Beyond Viburnum: A Single Set Of Ssrs For An Immense Genus, Trinity Paige Hamm

Masters Theses

Comprised of more than 160 species, Viburnum is the largest genus in the Viburnaceae (formerly Adoxaceae) alongside Adoxa and Sambucus. The native range of Viburnum species spans much of the Northern Hemisphere and extends into the mountains of South America and Southeastern Asia. Their wide geographic range has made Viburnum particularly interesting to phylogeographers and phylogeneticists. This diverse genus is also horticulturally valuable with varying traits such as fragrance, fruit color, and bud and inflorescence form. There is sufficient morphological diversity in the genus for there to be more than 70 species and intraspecific hybrids in cultivation, and in …

Relative Soybean Response To Aminocyclopyrachlor, 2,4-D, Dicamba, And Aminopyralid, Trey I. Clark

Masters Theses

This research compared the visual symptomology of four auxin herbicides applied at three rates to simulate tank contamination on non-auxin tolerant soybeans. The herbicides examined were aminocyclopyrachlor (ACP), 2,4-D, dicamba, and aminopyralid. The standard labeled rates (SLR) used to base the application rates were 0.12 kg ae ha^-1 for ACP and aminopyralid while dicamba and 2,4-D used 1.12 kg ae ha^-1. These four herbicides exhibit similar symptoms on soybeans which is problematic when diagnosing soybean response. One goal of this project was to obtain high-quality images of the four herbicide’s effect on soybeans, with the hope of …

Supplementing East Tennessee Landscapes For Pollinators With Native Perennials, Amani Khalil

Masters Theses

Tennessee, home to the Great Smoky Mountains, is a biodiversity hotspot for many plant and animal species, yet it receives relatively few conservation dollars (Jenkins et al., 2015). As a biodiversity hotspot, this region may be home to many endemic species, but little is known about the abundance or diversity of insect pollinators. In order to both estimate pollinator communities in East Tennessee and pollinator forage preferences for native Tennessee plants, we established four plots, comprised of three plant families across five common land use types. Over two field seasons we collected nearly 7,300 insect specimens with a total sampling …

Drought-Stress-Inducible Synthetic Promoters In Rice (Oryza Sativa), Paolo Montano Tagaloguin

Masters Theses

Drought can potentially affect the global rice supply. Recent climate modeling studies projected a more frequent and intense drought scenario, especially in top producing and exporting countries worldwide. Several drought-tolerant genes had been identified in recent years, and transgenic approaches had been employed to develop drought-tolerant rice. However, the constitutive expression of some drought-tolerant genes resulted in undesirable phenotypes and metabolic burden. The use of an inducible synthetic promoter is advantageous in preventing the possible pleiotropic effects from constitutively expressing a drought-tolerant gene. In this study, rationally designed synthetic promoters based on poplar (Populus trichocarpa) cis-motifs were …

Examining The Maternal Investment Of The Calyptra And Its Influence On The Sporophyte Offspring, Alessandra Marie Cabrera Aromin

Masters Theses

Maternal care is a critical component of offspring survival, development, and fitness in many organisms. In early diverging lineages of plants (mosses, liverworts, and hornworts), offspring sporophytes are physically attached to and nutritionally dependent on the maternal gametophyte throughout their lifespan. Mosses have a unique structure that is a maternal cap of gametophyte tissue that covers the sporophyte apex during critical developmental stages. The calyptra has shown to positively impact sporophyte survival and fitness. My research examines the influence of calyptra size on sporophyte growth and development.

Modeling Emergence Of Annual Bluegrass (Poa Annua L.) In Hybrid Bermudagrass [C. Dactylon (L.) Pers. X C. Transvaalensis Burtt-Davy], Dallas Rose Taylor

Masters Theses

Annual bluegrass (Poa annua L.; ABG) is a troublesome weed of turfgrass systems. A model to predict ABG emergence patterns could aid in timing measures to control ABG. Field research was initiated in January 2019 at the East Tennessee AgResearch & Education Center (ETREC) (Knoxville, TN) to better understand environmental conditions associated with ABG emergence. Plots (1 m²) included both hybrid bermudagrass [C. dactylon (L.) Pers. x C. transvaalensis Burtt-Davy, cv. ‘Tifway’, at a 1.5 cm cutting height] and bare soil. Emerged ABG inside a 1000 cm² area in the center of each plot was …

Determining Critical Fall Height For Bermudagrass Grown On Sand And Native Soil Root Zones, Taylor L. Williams

Masters Theses

Surface hardness is typically measured using a Clegg Impact Soil Tester (ASTM F355-D), but recent trends in sports turf are to use the F355-E missile as a potential alternative, because it may provide a more meaningful measurement. Forty traffic events were applied to ‘Tifway’ bermudagrass grown in an ASTM constructed sand root zone and a silt loam soil on the Center for Athletic Field Safety at the University of Tennessee. An F355-E was used to measure head injury criteria (HIC) for both root zones after every eight traffic events. Head injury criteria values were regressed to varying drop heights to …

Identifying Drought Tolerance Traits In Tennessee Soybean Genotypes: Recovery From Severe Water Deficit Stress, Samuel W. Purdom

Masters Theses

Ninety-four percent of U.S. grown soybeans are produced under rainfed conditions with intermittent droughts occurring late in the season during reproductive growth stages. Due to the temporary nature of drought, the ability of a crop to survive and recover effectively from water deficit stress is important for ensuring yield stability. In 2019 and 2020, two greenhouse experiments and two field studies were conducted to screen eleven soybean genotypes for transpiration response and recovery from water deficit stress and high vapor pressure deficit (VPD). In the first greenhouse study, soybean plants were grown in pots sealed to prevent evaporation and plants …

Improvements To Solanum Tuberosum Cv. ‘Desireé’ Cell Suspension Culture And Nicotiana Tabacum Cv. ‘Petit Havana’ Shoot Induction., Jessica Slade Layton

Masters Theses

Since the 1980s, progress in biotechnology has harnessed the incredible potential of plant biology. Plants have been engineered to be pest and herbicide resistant, enhance stress tolerance, and produce pharmaceutical proteins. Despite these feats of genetic engineering, plant tissue culture remains a limiting factor for future research. Unfortunately, the pressure to quickly innovate and produce novel products has pushed aside research to optimize tissue culture and exploring underlying molecular mechanisms for improved culture conditions. Efficient tissue culture methods are limited to a few plant taxa and are sometimes described in an oversimplified manner under the assumption they are facile to …

Phytophthora Capsici In Tennessee: Fungicide Resistance, Population Genetics And Cultural Control, Timothy Brent Siegenthaler

Masters Theses

Phytophthora capsici, a plant pathogenic oomycete, is the causal agent of the vegetable disease Phytophthora blight of pepper and cucurbits. Since the identification of P. capsici in 1922, a significant amount of research has been conducted to understand its biology and disease management. Despite this, little research had been conducted on this species in the state of Tennessee. Three studies were done from 2018 to 2020, focusing on fungicide resistance, population genetics, and testing management strategies in the field. In 2018 and 2019 a total of 248 isolate of P. capsici were collected from five counties in Tennessee. These isolates …

Forage Species Selection For Transitional Organic Production In The Southeastern United States, Jonathan Kubesch

Masters Theses

Despite the vast production markets for forage and organic products nationally, so far limited work has been done to develop organic forages specifically for Middle Tennessee or the mid-South in general. The present organic research field focuses on vegetable and grain production; however, forage production offers an easier transition for producers moving into certified organic agriculture. The present study seeks to evaluate several forage blends for optimizing forage production under low-input transitional organic conditions. Ideally a forage system could be tailored to the beef cattle operations of Middle Tennessee, the dominant forage consumption market in this region of the mid-South. …

Genome-Wide Associations Detect Allele Dose-Dependent Metabolism And Transport Genes As Basis For Variation In Sweetpotato Storage Root Culinary Profiles, Tara Elizabeth Rickman

Masters Theses

Previously considered a poor man’s crop, sweetpotato production is increasing globally due to its complex carbohydrates and other health benefits. Developing superior cultivars for various emerging market niches is imperative to sustaining and growing the production of sweetpotatoes. Culinary profiles such as sugar composition, organic acids and storage root color are vital for selecting sweetpotatoes targeted for various value-added products. To determine the genetic architecture and candidate genes underlying these culinary profiles, a genome wide association study on 23 traits was performed in over 700 sweetpotato accessions representing global genetic diversity. A new NGS-based quantitative reduced representation sequencing approach (omeSeq/qRRS), …

Effects Of Cooling And Postharvest Storage Methods On Broccoli Quality, Sarah Parker

Masters Theses

Broccoli (Brassica oleracea L. var. italica) is a cool-weather vegetable that is grown for its edible flowering heads and stalks. Broccoli inflorescences are immature plant organs with high respiration rates, resulting in a rapid loss of quality after harvest. The effects of cooling and storage methods on postharvest broccoli quality were evaluated based on metabolite contents of broccoli samples stored for 0, 7, 14, 21, 28, and 35 days. Sugar and organic acid contents were measured for broccoli harvested Fall 2018. Contents were compared for two cultivars (‘Diplomat’ and ‘Arcadia’) and two temperature treatments (not precooled and stored at 6 …

Influence Of Living Plant Roots And Mycorrhizal Hyphae On Soil Hydraulic Properties, Katelyn M. Marcacci

Masters Theses

The interrelationships between vegetation, soil, and water are fundamental in evaluating the projected impacts of global climate change. Many predictive models require soil hydraulic parameters as inputs. As most hydraulic parameter datasets are for repacked soil, the influence of vegetation on hydraulic parameters is not thoroughly understood. Living roots and mycorrhizal fungi cause physicochemical alterations in soils. Quantifying how vegetation influences soil hydraulic parameters is necessary to more accurately simulate soil water dynamics in climate models.

Laboratory experiments were conducted to test if the presence of roots and roots inoculated with mycorrhizal fungi have a significant effect on the saturated …

Reproduction And Bioconfinement Of Mir156 Transgenic Switchgrass (Panicum Virgatum L.), Chelsea Renai Johnson

Masters Theses

Genetic engineering of switchgrass (Panicum virgatum L.), an emerging cellulosic bioenergy feedstock, has been performed to alter cell walls for improved biofuel conversion. However, gene flow from transgenic switchgrass presents regulatory issues that may prevent commercialization of the genetically engineered crop in the eastern United States. Depending on its expression level, microRNA156 (miR156) can reduce, delay or eliminate flowering, which may be useful to mitigate transgene flow. However, flowering transition is dependent upon both environmental and genetic cues. In this study of transgenic switchgrass, two low (T14 and T35) and two medium (T27 and T37) miR156 overexpressing ‘Alamo’ lines …

The Impact Of Genetic And Environmental Factors On Phytonutrient Concentrations Within Leafy Specialty Crops In Controlled Environments, Rosalie M. Metallo

Masters Theses

Specialty leafy greens are excellent sources of antioxidants, vitamins, and minerals. Many of these metabolites are influenced by microclimate environmental conditions and genotype. The objective of this thesis was to measure the impacts of abiotic factors on plant growth and development along with nutritional content of specialty leafy greens in controlled environments. Chapter one looks at changes in biomass and nutritional content of different microgreen cultivars grown in a greenhouse over four growing seasons. Chapter two looks at the influence of light-emitting diode (LED) treatments on the growth and nutritional content of hydroponically grown kale. The morphology and nutritional content …

Evaluation Of Hall’S Panicgrass (Panicum Hallii Vasey) As A Model System For Genetic Modification Of Recalcitrance In Switchgrass (Panicum Virgatum (L.)), Joshua Nathaniel Grant

Masters Theses

While switchgrass (Panicum virgatum (L.)) has long been recognized as a viable bioenergy feedstock, it and other plants have cell walls with recalcitrance to processing. Recalcitrance is recognized as a major barrier to broad adoption of switchgrass and other feedstocks for cellulosic bioenergy. In an effort to reduce recalcitrance, transgenic plants have been generated with altered cell wall phenotypes such as reduced lignin. Unfortunately, stable transformation of switchgrass and other C4 grasses is time intensive, costly, and genetic analysis is further complicated by polyploid genomic structures. Unlike switchgrass, which can be tetraploid to octoploid, a closely related species, Hall’s …

Protein, Methionine, And Cysteine Upregulation In Phaseolus Vulgaris ‘Black Turtle Bean’ Seeds Through Sulfur Fertilization At V2 And R2 Stages Of Growth, Hannah Paige Barry

Masters Theses

The purpose of this research was to increase protein, methionine, and cysteine content in Phaseolus vulgaris L., common bean in relation to the inhibitory compound tannin. Previous research has shown that sulfur fertilization increases total protein, methionine and cysteine content in various crops, but always in tandem with inhibitory compound increases. If successful, the resulting bean seed will have a better nutrient profile for malnourished populations around the world.

Granular gypsum was applied at 0 kg S ha^-1 [kilograms of sulfur per hectare], 10 kg S ha^-1, 20 kg S ha^-1, 40 kg S ha …

Effect Of The Mutant Danbaekkong Or Stem Termination Alleles On Soybean Seed Protein Concentration, Amino Acid Composition, And Other Seed Quality And Agronomic Traits, Mia Justina Cunicelli

Masters Theses

Soybean [Glycine max (L.) Merr.] is the world’s leading source of vegetable oil and high quality protein meal. Increasing soybean protein concentration through selection while maintaining oil concentration and yield has been a constant goal for plant breeders, as there is a negative correlation between protein and oil and protein and yield. The objective of this study was to determine if marker assisted selection (MAS) for the Danbaekkong (Dan) protein allele influences agronomic and seed quality traits. A population of 24 F_8:10 [eighth filial generation advanced to the tenth filial generation] near isogenic lines (NILs) of soybean was …

Characterization Of Fusarium Species And Alternaria Alternata, And Their Effects On Switchgrass Health And Chemical Components, Sara Beth Collins

Masters Theses

Panicum virgatum L., readily referred to as Switchgrass, is a perennial warm-season bunch grass, used as an alternative energy source for biofuel production. There is insufficient research on switchgrass pathogens, and is expected that an increase in disease pressure will result as more land is reserved for this perennial crop. The purpose of this research was to identify and characterize pathogenic Alternaria alternata and Fusarium species on Switchgrass (Panicum virgatum L.), and to evaluate their impact on stand establishment and plant health. Molecular identifications of fungal isolates obtained from infected commercial switchgrass seed yielded eight species (A. alternata, …

Comparison Of Mesophyll Protoplast Isolation And Transformation Between Panicum Virgatum And Panicum Hallii, Andrea Grace Collins

Masters Theses

Protoplasts are appropriate targets for genome editing, DNA functional screens and transgenesis. This project focuses on the comparison of inexpensive mesophyll protoplast isolation via the use of food-grade enzymes and transformation between diploid Panicum hallii Vasey (PAH) and polyploid cellulosic feedstock Panicum virgatum L (switchgrass), a relative of PAH. PAH has great potential as a C4 model species for crop and bioenergy research. Here an inexpensive switchgrass and PAH mesophyll protoplast isolation and transformation system was developed; the first protoplast system for PAH. Using low-cost commercial food-grade enzymes, a cost reduction of ~1000-fold was achieved compared to traditional protoplast isolating …