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Jianfei Zhao

Phylogeny

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Insights Into The Evolution And Diversification Of The At-Hook Motif Nuclear Localized Gene Family In Land Plants, Jianfei Zhao, David Favero, Jiwen Qiu, Eric Roalson, Michael Neff Dec 2013

Insights Into The Evolution And Diversification Of The At-Hook Motif Nuclear Localized Gene Family In Land Plants, Jianfei Zhao, David Favero, Jiwen Qiu, Eric Roalson, Michael Neff

Jianfei Zhao

Background:
Members of the ancient land-plant-specific transcription factor AT-Hook Motif Nuclear Localized (AHL)
gene family regulate various biological processes. However, the relationships among the AHL genes, as well as their evolutionary history, still remain unexplored.

Results:
We analyzed over 500 AHL genes from 19 land plant species, ranging from the early diverging Physcomitrella
patens and Selaginella to a variety of monocot and dicot flowering plants. We classified the AHL proteins into three types (Type-I/-II/-III) based on the number and composition of their functional domains, the AT-hook motif(s) and PPC domain. We further inferred their phylogenies via Bayesian inference analysis and …