Open Access. Powered by Scholars. Published by Universities.®
- Keyword
-
- Microbial ecology (2)
- Chemistry -- Study and teaching (1)
- Chlorophyll (1)
- Climatic changes -- Southern Hemisphere (1)
- Contracting out (1)
-
- Cynobacteria -- Adaptation (1)
- Deliberative democracy (1)
- Drinking water -- Analysis (1)
- Environmental DNA -- Effect of biofilms on (1)
- Environmental impact analysis (1)
- Environmental monitoring (1)
- Fire management (1)
- Forest landscape management (1)
- Forest management (1)
- Forest management -- Mt. Hood National Forest (Agency : U.S.) (1)
- Forest restoration -- Economic aspects (1)
- Gaussian processes (1)
- Genetic transcription -- Regulation (1)
- Geographic information systems (1)
- Hydrology (1)
- Multivalent molecules (1)
- Network analysis (Planning) (1)
- Oceanography -- Pacific Ocean -- Observations (1)
- Optical radar -- Data processing (1)
- Plankton (1)
- Public lands -- United States -- Management (1)
- Reservoir ecology (1)
- Science -- Study and teaching -- Curricula (1)
- Science and state (1)
- Southern Hemisphere -- Climate (1)
- Publication
-
- Environmental Science and Management Faculty Publications and Presentations (5)
- Biology Faculty Publications and Presentations (2)
- Chemistry Faculty Publications and Presentations (1)
- Geography Faculty Publications and Presentations (1)
- Mathematics and Statistics Faculty Publications and Presentations (1)
Articles 1 - 10 of 10
Full-Text Articles in Life Sciences
Dynamics Of Prochlorococcus Diversity And Photoacclimation During Short-Term Shifts In Water Column Stratification At Station Aloha, Anne W. Thompson, Ger Van Den Engh, Nathan A. Ahlgren, Kathleen Kouba, Samantha Ward, Samuel T. Wilson, David M. Karl
Dynamics Of Prochlorococcus Diversity And Photoacclimation During Short-Term Shifts In Water Column Stratification At Station Aloha, Anne W. Thompson, Ger Van Den Engh, Nathan A. Ahlgren, Kathleen Kouba, Samantha Ward, Samuel T. Wilson, David M. Karl
Biology Faculty Publications and Presentations
The cyanobacterium Prochlorococcus is the dominant phototroph in surface waters of the vast oligotrophic oceans, the foundation of marine food webs, and an important component of global biogeochemical cycles. The prominence of Prochlorococcus across the environmental gradients of the open ocean is attributed to its extensive genetic diversity and flexible chlorophyll physiology, enabling light capture over a wide range of intensities. What remains unknown is the balance between temporal dynamics of genetic diversity and chlorophyll physiology in the ability of Prochlorococcus to respond to a variety of short (approximately 1 day) and longer (months to year) changes in the environment. …
Spatial Factor Models For High-Dimensional And Large Spatial Data: An Application In Forest Variable Mapping, Daniel Taylor-Rodríguez, Andrew O. Finley, Abhirup Datta, Chad Babcock, Hans-Erik Andersen, Bruce D. Cook, Douglas C. Morton, Sudipto Banerjee
Spatial Factor Models For High-Dimensional And Large Spatial Data: An Application In Forest Variable Mapping, Daniel Taylor-Rodríguez, Andrew O. Finley, Abhirup Datta, Chad Babcock, Hans-Erik Andersen, Bruce D. Cook, Douglas C. Morton, Sudipto Banerjee
Mathematics and Statistics Faculty Publications and Presentations
Gathering information about forest variables is an expensive and arduous activity. As such, directly collecting the data required to produce high-resolution maps over large spatial domains is infeasible. Next generation collection initiatives of remotely sensed Light Detection and Ranging (LiDAR) data are specifically aimed at producing complete-coverage maps over large spatial domains. Given that LiDAR data and forest characteristics are often strongly correlated, it is possible to make use of the former to model, predict, and map forest variables over regions of interest. This entails dealing with the high-dimensional (∼102 ) spatially dependent LiDAR outcomes over a large number …
Patterns And Drivers Of Recent Disturbances Across The Temperate Forest Biome, Andreas Sommerfeld, Cornelius Senf, Brian Buma, Anthony W. D'Amato, Tiphaine Despres, Ignacio Díaz-Hormazábal, Shawn Fraver, Lee E. Frelich, Alvaro G. Gutiérrez, Sarah J. Hart, Brian J. Harvey, Hong S. He, Tomáš Hlásny, Andrés Holz, Multiple Additional Authors
Patterns And Drivers Of Recent Disturbances Across The Temperate Forest Biome, Andreas Sommerfeld, Cornelius Senf, Brian Buma, Anthony W. D'Amato, Tiphaine Despres, Ignacio Díaz-Hormazábal, Shawn Fraver, Lee E. Frelich, Alvaro G. Gutiérrez, Sarah J. Hart, Brian J. Harvey, Hong S. He, Tomáš Hlásny, Andrés Holz, Multiple Additional Authors
Geography Faculty Publications and Presentations
Increasing evidence indicates that forest disturbances are changing in response to global change, yet local variability in disturbance remains high. We quantified this considerable variability and analyzed whether recent disturbance episodes around the globe were consistently driven by climate, and if human influence modulates patterns of forest disturbance. We combined remote sensing data on recent (2001–2014) disturbances with in-depth local information for 50 protected landscapes and their surroundings across the temperate biome. Disturbance patterns are highly variable, and shaped by variation in disturbance agents and traits of prevailing tree species. However, high disturbance activity is consistently linked to warmer and …
Water Flow And Biofilm Cover Influence Environmental Dna Detection In Recirculating Streams, Arial Shogren, Jennifer L. Tank, Scott P. Egan, Olivia August, Emma J. Rosi, Brittany R. Hanrahan, Mark A. Renshaw, Crysta A. Gantz, Diogo Bolster
Water Flow And Biofilm Cover Influence Environmental Dna Detection In Recirculating Streams, Arial Shogren, Jennifer L. Tank, Scott P. Egan, Olivia August, Emma J. Rosi, Brittany R. Hanrahan, Mark A. Renshaw, Crysta A. Gantz, Diogo Bolster
Environmental Science and Management Faculty Publications and Presentations
The increasing use of environmental DNA (eDNA) for determination of species presence in aquatic ecosystems is an invaluable technique for both ecology as a field and for the management of aquatic ecosystems. We examined the degradation dynamics of fish eDNA using an experimental array of recirculating streams, also using a “nested” primer assay to estimate degradation among eDNA fragment sizes. We introduced eDNA into streams with a range of water velocities (0.1–0.8 m s–1) and substrate biofilm coverage (0–100%) and monitored eDNA concentrations over time (∼10 d) to assess how biophysical conditions influence eDNA persistence. We found that the presence …
Using Transboundary Wildfire Exposure Assessments To Improve Fire Management Programs: A Case Study In Greece, Palaiologos Palaiologou, Alan A. Ager, Max Nielsen-Pincus, Cody Evers, Kostas Kalabokidis
Using Transboundary Wildfire Exposure Assessments To Improve Fire Management Programs: A Case Study In Greece, Palaiologos Palaiologou, Alan A. Ager, Max Nielsen-Pincus, Cody Evers, Kostas Kalabokidis
Environmental Science and Management Faculty Publications and Presentations
Numerous catastrophic wildfires in Greece have demonstrated that relying on fire suppression as the primary risk-management strategy is inadequate and that existing wildfire-risk governance needs to be re-examined. In this research, we used simulation modelling to assess the spatial scale of wildfire exposure to communities and cultural monuments in Chalkidiki, Greece. The study area typifies many areas in Greece in terms of fire regimes, ownership patterns and fire-risk mitigation. Fire-transmission networks were built to quantify connectivity among land tenures and populated places. We found that agricultural and unmanaged wildlands are key land categories that transmit fire exposure to other land …
The Economic Contribution Of Stewardship Contracting: Two Case Studies From The Mount Hood National Forest, Jean M. Daniels, Max Nielsen-Pincus, Mike Paruszkiewicz, Nathan Poage
The Economic Contribution Of Stewardship Contracting: Two Case Studies From The Mount Hood National Forest, Jean M. Daniels, Max Nielsen-Pincus, Mike Paruszkiewicz, Nathan Poage
Environmental Science and Management Faculty Publications and Presentations
We conducted an economic analysis of two case study stewardship contracts on the Mount Hood National Forest in western Oregon. Stewardship contracting has been embraced by some federal managers to achieve restoration goals while providing economic benefits to local communities. Little is known about economic contributions from stewardship contracts, including how they compare against Secure Rural Schools funding or the century-old payments to counties revenue sharing system. Using expenditure data from sale purchasers, contractors, and fiscal agents, we developed methodology to track spending and used IMPLAN software to estimate economic contributions and multipliers. Results showed that (1) commercial thinning, service …
Multivalency Regulates Activity In An Intrinsically Disordered Transcription Factor, Sarah Clark, Janette B. Myers, Ashleigh King, Radovan Fiala, Jiri Novacek, Grant Pearce, Steve L. Reichow, Elisar J. Barbar
Multivalency Regulates Activity In An Intrinsically Disordered Transcription Factor, Sarah Clark, Janette B. Myers, Ashleigh King, Radovan Fiala, Jiri Novacek, Grant Pearce, Steve L. Reichow, Elisar J. Barbar
Chemistry Faculty Publications and Presentations
The transcription factor ASCIZ (ATMIN, ZNF822) has an unusually high number of recognition motifs for the product of its main target gene, the hub protein LC8 (DYNLL1). Using a combination of biophysical methods, structural analysis by NMR and electron microscopy, and cellular transcription assays, we developed a model that proposes a concerted role of intrinsic disorder and multiple LC8 binding events in regulating LC8 transcription. We demonstrate that the long intrinsically disordered C-terminal domain of ASCIZ binds LC8 to form a dynamic ensemble of complexes with a gradient of transcriptional activity that is inversely proportional to LC8 occupancy. The preference …
Assessing Transboundary Wildfire Exposure In The Southwestern United States, Alan A. Ager, Palaiologos Palaiologou, Cody Evers, Michelle A. Day, Ana M.G. Barros
Assessing Transboundary Wildfire Exposure In The Southwestern United States, Alan A. Ager, Palaiologos Palaiologou, Cody Evers, Michelle A. Day, Ana M.G. Barros
Environmental Science and Management Faculty Publications and Presentations
We assessed transboundary wildfire exposure among federal, state, and private lands and 447 communities in the state of Arizona, southwestern United States. The study quantified the relative magnitude of transboundary (incoming, outgoing) versus nontransboundary (i.e., self-burning) wildfire exposure based on land tenure or community of the simulated ignition and the resulting fire perimeter. We developed and described several new metrics to quantify and map transboundary exposure. We found that incoming transboundary fire accounted for 37% of the total area burned on large parcels of federal and state lands, whereas 63% of the area burned was burned by ignitions within the …
Connecting Chemistry To Community With Deliberative Democracy, Regis Komperda, Jack Barbera, Erin Shortlidge, Gwen Shusterman, Stem Education And Equity Institute, Portland State University
Connecting Chemistry To Community With Deliberative Democracy, Regis Komperda, Jack Barbera, Erin Shortlidge, Gwen Shusterman, Stem Education And Equity Institute, Portland State University
Biology Faculty Publications and Presentations
Science education communities have called for rethinking curricula to improve student understanding of the nature of science and the role of science in addressing controversial modern issues such as climate change, energy policy, and pollution levels. One approach to meeting this call is integrating these topics into class activities that require students to use discussion and scientific approaches to solve problems and deliberate potential policy solutions. Deliberative democracy (DD) is one such active learning approach in which students work in peer groups to reach a consensus on a scientific topic relevant to both real-world issues and course content. During DD …
Bioassessment Of A Drinking Water Reservoir Using Plankton: High Throughput Sequencing Vs. Traditional Morphological Method, Wanli Gao, Zhaojin Chen, Yuying Li, Yangdong Pan, Jingya Zhu, Shijun Guo, Lanqun Hu, Jin Huang
Bioassessment Of A Drinking Water Reservoir Using Plankton: High Throughput Sequencing Vs. Traditional Morphological Method, Wanli Gao, Zhaojin Chen, Yuying Li, Yangdong Pan, Jingya Zhu, Shijun Guo, Lanqun Hu, Jin Huang
Environmental Science and Management Faculty Publications and Presentations
Drinking water safety is increasingly perceived as one of the top global environmental issues. Plankton has been commonly used as a bioindicator for water quality in lakes and reservoirs. Recently, DNA sequencing technology has been applied to bioassessment. In this study, we compared the effectiveness of the 16S and 18S rRNA high throughput sequencing method (HTS) and the traditional optical microscopy method (TOM) in the bioassessment of drinking water quality. Five stations reflecting different habitats and hydrological conditions in Danjiangkou Reservoir, one of the largest drinking water reservoirs in Asia, were sampled May 2016. Non-metric multi-dimensional scaling (NMDS) analysis showed …