Life Sciences Commons^™

Challenges To Select Suitable Habitats And Demonstrate ‘Additionality’ In Blue Carbon Projects: A Seagrass Case Study, Anna Lafratta, Oscar Serrano, Pere Masqué, Miguel A. Mateo, Milena Fernandes, Sam Gaylard, Paul S. Lavery

Research outputs 2014 to 2021

© 2020 Elsevier Ltd Seagrass restoration has been suggested as a Blue Carbon (BC) strategy for climate change mitigation. For Nationally Determined Contributions (NDC) and carbon crediting schemes, BC projects need to demonstrate ‘additionality’, that is enhanced CO2 sequestration and/or avoided greenhouse gas emissions following management actions. This typically requires determining soil carbon accumulation rates (CAR), which is often done using radionuclides or surface elevation tables to estimate sedimentation rates. Here we undertook a case study, using 210Pb and 14C dating, to detect possible changes in Corg stocks and CAR following the loss and partial recovery of Posidonia seagrass meadows …

Global Patterns In Seagrass Herbivory: Why, Despite Existing Evidence, There Are Solid Arguments In Favor Of Latitudinal Gradients In Seagrass Herbivory, K. L. Heck Jr, M. Samsonova, A. G. B. Poore, Glenn A. Hyndes

Research outputs 2014 to 2021

© 2020, Coastal and Estuarine Research Federation. The ecological paradigm that biological interactions are more intense in the tropics than in temperate or polar regions has existed since the mid-twentieth century, but several recent meta-analyses have provided scant evidence for latitudinal gradients in the intensity of herbivory. This contradictory evidence led us to carefully review the data and results of several of those papers that failed to find latitudinal gradients in rates of seagrass herbivory. To re-evaluate the arguments around the presence or absence of latitudinal gradients in herbivory in seagrass, we began by expanding the selection criteria to include …

Review Of The Scientific And Institutional Capacity Of Small Island Developing States In Support Of A Bottom-Up Approach To Achieve Sustainable Development Goal 14 Targets, Rebecca Zitoun, Sylvia G. Sander, Pere Masque Barri, Saul Perez Pijuan, Peter W. Swarzenski

Research outputs 2014 to 2021

Capacity building efforts in Small Island Developing States (SIDS) are indispensable for the achievement of both individual and collective ocean-related 2030 agenda priorities for sustainable development. Knowledge of the individual capacity building and research infrastructure requirements in SIDS is necessary for national and international efforts to be effective in supporting SIDS to address nationally-identified sustainable development priorities. Here, we present an assessment of human resources and institutional capacities in SIDS United Nations (UN) Member States to help formulate and implement durable, relevant, and effective capacity development responses to the most urgent marine issues of concern for SIDS. The assessment highlights …

Morphological And Heartwood Variation Of Santalum Macgregorii In Papua New Guinea, T. Page, G. K. Jeffrey, P. Macdonell, D. Hettiarachchi, Mary C. Boyce, A. Lata, L. Oa, G. Rome

Research outputs 2014 to 2021

© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. Santalum macgregorii (sandalwood), which is endemic to the southern part of Papua New Guinea (PNG), has been heavily exploited for its fragrant heartwood and is classified as threatened across its natural range. Domestication and smallholder agroforestry offer the means to preserve remaining diversity. This study was undertaken to understand the extent of remaining natural variation to support the species’s conservation and domestication. We evaluated morphological, heartwood and essential oil characters in 126 S. macgregorii trees in five populations (districts) in PNG’s Central, Gulf and Western …

Using Climate Change Models To Inform The Recovery Of The Western Ground Parrot Pezoporus Flaviventris, Shaun W. Molloy, Allan H. Burbidge, Sarah Comer, Robert A. Davis

Research outputs 2014 to 2021

Translocation of species to areas of former habitat after threats have been mitigated is a common conservation action. However, the long-term success of reintroduction relies on identification of currently available habitat and areas that will remain, or become, habitat in the future. Commonly, a short-term view is taken, focusing on obvious and assumed threats such as predators and habitat degradation. However, in areas subject to significant climate change, challenges include correctly identifying variables that define habitat, and considering probable changes over time. This poses challenges with species such as the western ground parrot Pezoporus flaviventris, which was once relatively common …

Deriving Statistical Inference From The Application Of Artificial Neural Networks To Clinical Metabolomics Data, Kevin M. Mendez

Theses: Doctorates and Masters

Metabolomics data are complex with a high degree of multicollinearity. As such, multivariate linear projection methods, such as partial least squares discriminant analysis (PLS-DA) have become standard. Non-linear projections methods, typified by Artificial Neural Networks (ANNs) may be more appropriate to model potential nonlinear latent covariance; however, they are not widely used due to difficulty in deriving statistical inference, and thus biological interpretation. Herein, we illustrate the utility of ANNs for clinical metabolomics using publicly available data sets and develop an open framework for deriving and visualising statistical inference from ANNs equivalent to standard PLS-DA methods.

Local Binary Pattern Based Algorithms For The Discrimination And Detection Of Crops And Weeds With Similar Morphologies, Vi Nguyen Thanh Le

Theses: Doctorates and Masters

In cultivated agricultural fields, weeds are unwanted species that compete with the crop plants for nutrients, water, sunlight and soil, thus constraining their growth. Applying new real-time weed detection and spraying technologies to agriculture would enhance current farming practices, leading to higher crop yields and lower production costs. Various weed detection methods have been developed for Site-Specific Weed Management (SSWM) aimed at maximising the crop yield through efficient control of weeds. Blanket application of herbicide chemicals is currently the most popular weed eradication practice in weed management and weed invasion. However, the excessive use of herbicides has a detrimental impact …

A Novel Method For Detecting Morphologically Similar Crops And Weeds Based On The Combination Of Contour Masks And Filtered Local Binary Pattern Operators, Vi Nguyen Thanh Le, Selam Ahderom, Beniamin Apopei, Kamal Alameh

Research outputs 2014 to 2021

Background: Weeds are a major cause of low agricultural productivity. Some weeds have morphological features similar to crops, making them difficult to discriminate. Results: We propose a novel method using a combination of filtered features extracted by combined Local Binary Pattern operators and features extracted by plant-leaf contour masks to improve the discrimination rate between broadleaf plants. Opening and closing morphological operators were applied to filter noise in plant images. The images at 4 stages of growth were collected using a testbed system. Mask-based local binary pattern features were combined with filtered features and a coefficient k. The classification of …

Multi-Omics Strategies For Decoding Smoke-Assisted Germination Pathways And Seed Vigour, Utpal Bose, Angéla Juhász, James A. Broadbent, Setsuko Komatsu, Michelle L. Colgrave

Research outputs 2014 to 2021

© 2020 by the authors. Licensee MDPI, Basel, Switzerland. The success of seed germination and the successful establishment of seedlings across diverse environmental conditions depends on seed vigour, which is of both economic and ecologic importance. The smoke-derived exogenous compound karrikins (KARs) and the endogenous plant hormone strigolactone (SL) are two classes of butanolide-containing molecules that follow highly similar signalling pathways to control diverse biological activities in plants. Unravelling the precise mode-of-action of these two classes of molecules in model species has been a key research objective. However, the specific and dynamic expression of biomolecules upon stimulation by these signalling …

Seasonal Weather And Climate Prediction Over Area Burned In Grasslands Of Northeast China, Ali Hassan Shabbir, Jiquan Zhang, John W. Groninger, Eddie J. B. Van Etten, Samuel Asumadu Sarkodie, James A. Lutz, Carlos Valencia

Research outputs 2014 to 2021

© 2020, The Author(s). Grassland fire dynamics are subject to myriad climatic, biological, and anthropogenic drivers, thresholds, and feedbacks and therefore do not conform to assumptions of statistical stationarity. The presence of non-stationarity in time series data leads to ambiguous results that can misinform regional-level fire management strategies. This study employs non-stationarity in time series data among multiple variables and multiple intensities using dynamic simulations of autoregressive distributed lag models to elucidate key drivers of climate and ecological change on burned grasslands in Xilingol, China. We used unit root methods to select appropriate estimation methods for further analysis. Using the …

Exponential Increase Of Plastic Burial In Mangrove Sediments As A Major Plastic Sink, C. Martin, F. Baalkhuyur, L. Valluzzi, V. Saderne, M. Cusack, H. Almahasheer, P. K. Krishnakumar, L. Rabaoui, M. A. Qurban, A. Arias-Ortiz, Pere Masqué, C. M. Duarte

Research outputs 2014 to 2021

© 2020 The Authors. Sequestration of plastics in sediments is considered the ultimate sink of marine plastic pollution that would justify unexpectedly low loads found in surface waters. Here, we demonstrate that mangroves, generally supporting high sediment accretion rates, efficiently sequester plastics in their sediments. To this end, we extracted microplastics from dated sediment cores of the Red Sea and Arabian Gulf mangrove (Avicennia marina) forests along the Saudi Arabian coast. We found that microplastics <0.5 mm dominated in mangrove sediments, helping explain their scarcity, in surface waters. We estimate that 50 ± 30 and 110 ± 80 metric tons of plastic may have been buried since the 1930s in mangrove sediments across the Red Sea and the Arabian Gulf, respectively. We observed an exponential increase in the plastic burial rate (8.5 ± 1.2% year-1) since the 1950s in line with the global plastic production increase, confirming mangrove sediments as long-term sinks for plastics.

Distribution And Evolution Of Fukushima Dai-Ichi Derived 137cs, 90sr, And 129i In Surface Seawater Off The Coast Of Japan, Jennifer A. Kenyon, Ken O. Buesseler, Núria Casacuberta, Maxi Castrillejo, Shigeyoshi Otosaka, Pere Masqué, Jessica A. Drysdale, Steven M. Pike, Virginie Sanial

Research outputs 2014 to 2021

© 2020 American Chemical Society. The Fukushima Dai-ichi Nuclear Power Plants (FDNPPs) accident in 2011 led to an unprecedented release of radionuclides into the environment. Particularly important are 90Sr and 137Cs due to their known health detriments and long half-lives (T1/2 ≈ 30 y) relative to ecological systems. These radionuclides can be combined with the longer-lived 129I (T1/2 = 15.7 My) to trace hydrologic, atmospheric, oceanic, and geochemical processes. This study seeks to evaluate 137Cs, 90Sr, and 129I concentrations in seawater off the coast of Japan, reconcile the sources of contaminated waters, and assess the application of 137Cs/90Sr, 129I/137Cs, and …

Top 30 Cm Soil C Org Stocks, Isotopic C Org Signature (13dc) And Fine Sediment Content (Silt And Clay %) Estimated In Soil Cores Sampled In Seagrass Meadows Around Australia [Dataset], Ines Mazarrasa, Paul Lavery, Carlos M. Duarte, Anna Lafratta, Catherine E. Lovelock, Peter I. Macreadie, Jimena Samper-Villarreal, Cristian Salinas, Christian Sanders, Stacey Trevathan-Tackett, Mary Young, Andy Steven, Oscar Serrano

Research Datasets

This database contains data on top 30 cm soil biogeochemical properties from soil cores (minimum length of 30 cm) sampled in seagrass (n=201 cores) and adjacent unvegetated patches (n=39) around Australia.

Average biogeochemical properties per core along with information about type of environment, biotic characteristics and environmental conditions.

In particular, the variables included in sheet 1 are:

- Core ID (column A): core code

- Location (column B): name of the region of the sampling site.

- Latitude / Longitude (columns C, D): latitude and longitude

- Bioregion (column E): classified the sampling sites according to …

An Investigation Into The Spatial Distribution, Habitat Selection And Resource Usage Of The Red Fox (Vulpes Vulpes) Inhabiting Urban Reserves Within Perth, Western Australia, Michael Thomas Main

Theses: Doctorates and Masters

I attempted to track a population of urban foxes in Kings Park, but due to collar failure, only one collar was retrieved. The GPS telemetry data from this fox produced home range estimates for minimum convex polygon (MCP) and kernel density (KD) of 0.302 km² and 0.331 km², respectively. The fox was predominantly active at night, with a ten-fold increase in movement during nocturnal periods when compared to daytime movements. Roads and man-made tracks were important for facilitating movement of the fox through its home range, with almost 97% of location fixes recorded within 100m of these features. The fox …