Life Sciences Commons^™

Bridging Biological Systems With Social Behavior, Conservation, Decision Making, And Well-Being Through Hybrid Mathematical Modeling, Maggie Renee Sullens

Faculty Publications and Other Works -- Mathematics

This dissertation defense presentation highlights the power of hybrid mathematical modeling and addresses crucial issues such as:

1️. The Impact of Industry Collapse on Community Mental Health: A Complex Contagion ODE Model.

2️. Budget Allocation and Illegal Fishing: A Game Theoretic Model.

3️. Reactive Scope Model with an Energy Budget and Multiple Mediators: An ODE Model

The overarching theme of Hybrid Mathematical Modeling beautifully captures the essence of this work, demonstrating its potential to unravel ecological issues while addressing the intricate interactions between humans and the environment.

Fun Azores: A Functional Trait Database For The Meio-, Macro-, And Megafauna From The Azores Marine Park (Mid-Atlantic Ridge), Neus Campanyà-Llovet, Amanda E. Bates, Daphne Cuvelier, Eva Giacomello, Diana Catarino, Andrew J. Gooday, Björn Berning, Blanca Figuerola, Manuel A. E. Malaquias, Carlos J. Moura, Joana R. Xavier, Tracey Sutton, Laurence Fauconnet, Sofia P. Ramalho, Bárbara De Moura Neves, Gui M. Machado, Tammy Horton, Andrey V. Gebruk, Kirill Minin, Joël Bried, Tina Molodtsova, Mónica A. Silva, Anna Dilman, Antonina Kremenetskaia, Eudriano F. S. Costa, Jameson Clarke, Helen R. Martins, Christopher K. Pham, Marina Carreiro-Silva, Ana Colaço

Marine & Environmental Sciences Faculty Articles

Trait-based approaches that complement taxonomy-based studies have increased in popularity among the scientific community over the last decades. The collection of biological and ecological characteristics of species (i.e., traits) provides insight into species and ecosystem vulnerability to environmental and anthropogenic changes, as well as ecosystem functioning. Here, we present the FUN Azores trait database, describe our approach, evaluate its scope, compare it to other marine trait databases, and explore the spatial distribution of its traits with “functional maps.” While most of the available trait databases to date contain essential information to understand the functional diversity of a taxonomic or functional …

Striped Blenny (Chasmodes Bosquianus) Presence And Behavior Between Sunrise And Sunset At Oyster Landing, South Carolina, Madeline Schuetze

Honors Theses

Lunar and diel cycles of fishes can help to interpret their behaviors during their reproductive season. Temperate estuaries are used by many benthic fishes for shelter and reproduction. This study examined the behavior and presence of striped blennies (Chasmodes bosquianus) during diel and lunar cycles. PVC pipe shelters were placed to mimic oyster shell nests, a natural habitat for blennies, and cameras were placed to monitor these shelters in April, May, and June 2022, during the striped blenny reproductive period. Video footage was reviewed and analyzed for the presence and behavior of both male and female blennies. Male presence …

Social Network Analysis Of White-Tailed Deer Scraping Behavior: Implications For Disease Transmission, Michael E. Egan, Kim M. Pepin, Justin Fischer, Scott R. Hygnstrom, Kurt C. Vercauteren, Guillaume Bastille-Rousseau

USDA Wildlife Services: Staff Publications

Host contact structure affects pathogen transmission in host populations, but many measures of host contact do not distinguish contacts that are relevant to pathogen transmission from those that are not. Scrapes are sites for chemical communication by white-tailed deer (Odocoileus virginianus) during the breeding season and potential sites of transmission of prions, the causative agent of chronic wasting disease (CWD). Scrape-related behaviors vary in their probability of transmitting prions to or from the environment, suggesting that behavior be combined with contact structure to better reflect potential heterogeneity in prion transmission at scrapes. We recorded visits and behaviors by …

Methods For Drone Trajectory Analysis Of Bottlenose Dolphins (Tursiops Truncatus), Jillian D. Bliss

Theses and Dissertations

With the increase in the use of UAS (Unmanned Aerial Systems) for marine mammal research, there is a need for the development of methods of analysis to transform UAS high resolution video into quantitative data. This study sought to develop a preliminary method of analysis that would quantify and present a way to visualize the dynamics and relative spatial distribution and changes in distribution of bottlenose dolphins (Tursiops truncatus) in the waters of Turneffe Atoll, Belize. This approach employs a previously developed video tracking program ‘Keypoint Tracking’ that enables manual tracking of individual dolphins and the creation of …

The Effect Of Marine Snow Particle Distribution On The Foraging Behavior Of Calanus Pacificus, Elena Beckhaus

Theses

Marine snow is a major component of the biological pump, through which carbon is exported to the deep ocean. The sinking of marine snow can be disrupted by organisms, including many species of zooplankton that ingest or break up aggregates. These processes can have important impacts on planktonic food web dynamics and carbon export. Marine snow can have vertically patchy distributions, occurring in thin layers, which may further affect interactions with zooplankton. In this lab-based study, we examined how the presence of a marine snow layer affects copepod behavior and ingestion.

We conducted a series of experiments in which copepods …

Water Management For Establishment Of Alfalfa (Medicago Sativa L.), J. B. Rassini, E. J. A. Leme

IGC Proceedings (1997-2023)

This research was carried out in 1997, at the “Centro de Ciências Agrárias” of the “Universidade Federal de São Carlos”, in Araras, SP, Brazil, to evaluate the behavior of three growth stages (S₁ = initial vegetative stage, S₂ = full vegetative stage, and S₃ = reproductive stage) of the “Crioula” alfalfa cultivar, in the presence of four water levels (L₁ = 100%, L₂ = 80%, L₃ = 45-50% and, L₄ =20-25% of a sprinkler irrigation) in a field trial. Growth stages changed according to water levels, and S₂ stage was the most …

Emulating Agricultural Disease Management: Comparing Risk Preferences Between Industry Professionals And Online Participants Using Experimental Gaming Simulations And Paired Lottery Choice Surveys, Eric M. Clark, Scott C. Merrill, Luke Trinity, Gabriela Bucini, Nicholas Cheney, Ollin Langle-Chimal, Trisha Shrum, Christopher Koliba, Asim Zia, Julia M. Smith

College of Agriculture and Life Sciences Faculty Publications

Mitigating the spread of disease is crucial for the well-being of agricultural production systems. Implementing biosecurity disease prevention measures can be expensive, so producers must balance the costs of biosecurity investments with the expected benefits of reducing the risk of infections. To investigate the risk associated with this decision making process, we developed an online experimental game that simulates biosecurity investment allocation of a pork production facility during an outbreak. Participants are presented with several scenarios that vary the visibility of the disease status and biosecurity protection implemented at neighboring facilities. Certain rounds allowed participants to spend resources to reduce …

First Experience With A Camera Collar In A Free-Ranging Przewalski’S Horse Group In The Mongolian Gobi, Petra Kaczensky, Chris Walzer, Gankhuyag Gantula, Davaa Lkhagvasuren, Bazartseren Boldgiv, Oyunsaikhan Ganbaatar, Nanjid Altansukh

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Remote sensing and satellite telemetry have allowed to greatly expanding the understanding of how species use various landscapes, even in remote settings. However, remotely collecting data also harbors the risk of losing “touch with the ground.” We explore the possibility of the additional insight cameras integrated in GPS-satellite collars can provide for the behavior and ecology of free-ranging Przewalski’s horse in the remote Great Gobi B Strictly Protected Area in southeastern Mongolia. Over a 91-day period, the camera collected 1,080 images. 62% of the images showed Przewalski’s horses and provided insights into behavior and grouping patterns and can supplement indirect …

Daily And Landscape Influences Of Species Visitation To Toxic Bait Sites For Wild Pigs, Nathan P. Snow, Joseph M. Halseth, Michael P. Glow, Michael Lavelle, Justin Fischer, Eric H. Vannatta, Kurt C. Vercauteren

USDA Wildlife Services: Staff Publications

Toxic baiting of wild pigs (Sus scrofa) is a potential new tool for population control and damage reduction in the United States. Use of toxic bait sites by non‐target species is concerning because of the risks posed from exposure to a toxic bait. A 2018 field trial in northern Texas, USA, examining the efficacy of a prototype toxic bait (HOGGONE®, containing 10% sodium nitrite) revealed unexpected hazards to non‐target species, primarily passerine birds, from consuming toxic bait spilled outside of bait stations by wild pigs. The hazards jeopardize the ability to register HOGGONE as a tool for controlling …

Home Range Size Of Free‐Roaming Beef Suckler Cattle In The Forest, Shusuke Sato, Yoshitaka Deguchi, Takeshi Yasue, Takami Kosako

IGC Proceedings (1997-2023)

No abstract provided.

Seasonal Movements And Habitat Use Of Juvenile Smooth Hammerhead Sharks In The Western North Atlantic Ocean And Significance For Management, Ryan K. Logan, Jeremy Vaudo, Lara L. Sousa, Mark Sampson, Bradley M. Wetherbee, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Articles

Upper trophic level predators dramatically impacted by fisheries include the large-bodied hammerhead sharks, which have become species of conservation concern worldwide. Implementing spatial management for conservation of hammerhead populations requires knowledge of temporal distribution patterns and habitat use, identification of essential habitat for protection, and quantification of interactions with human activities. There is little such information for the smooth hammerhead shark, Sphyrna zygaena. We used fin-mounted satellite tags to examine the movements and habitat use of juvenile smooth hammerheads, a demographic segment particularly threatened by exploitation. Six sharks were tagged off the US mid-Atlantic and tracked for 49–441 days …

Social Structure Of Killer Whales (Orcinus Orca) In The Galápagos Archipelago, Mary Gad

Scientific Communication News

No abstract provided.

Black Vulture Conflict And Management In The United States: Damage Trends, Management Overview, And Research Needs, Bryan M. Kluever, Morgan Pfeiffer, Scott C. Barras, Brett Dunlap, Lee A. Humberg

USDA Wildlife Services: Staff Publications

Contrary to rapid declines of many vulture (Accipitridae, Cathartidea) species worldwide, black vulture (Coragyps atratus) populations are increasing and expanding their range in North America. Vultures exhibit complex behaviors and can adapt to any human-dominated landscape or land use. These traits, combined with population growth and range expansion, have contributed to increased human–vulture conflicts. Our goal was to summarize the current status and trends in human–black vulture conflicts (hereafter human– vulture conflicts), review available management strategies, identify knowledge gaps, and provide recommendations to enhance management and understanding of this species and the associated conflicts. We found human–vulture conflicts …

Effects Of Brodifacoum And Diphacinone Exposure On Four Species Of Reptiles: Tissue Residue Levels And Survivorship, Richard E. Mauldin, Gary W. Witmer, S. A. Shriner, Rachael S. Moulton, Katherine E. Horak

USDA Wildlife Services: Staff Publications

BACKGROUND: Anticoagulant rodenticides are used worldwide to control pest rodent species. However, the risks posed to nontarget reptiles have not been well characterized. In this study, 46 giant ameivas (Ameiva ameiva), 39 boa constrictors (Boa constrictor), 33 wood turtles (Rhinoclemmys pulcherrima), and 47 green iguanas (Iguana iguana) were orally dosed with one of two levels of either diphacinone or brodifacoum anticoagulant in propylene glycol solutions. Dosages were derived using daily food intake (DFI) equations, converting DFI to an equivalent anticoagulant bait amount and gavaging the solution volume needed to deliver the quantity of anticoagulant in that amount of bait. Animals …

Activity, Physiology And Milk Production Of Yaks And Two Different Yak Crossbreds Grazing Himalayan Pasture Sites At 4700 M And 3000 M, Shanker R. Barsila, Naba R. Devkota, Michael Kreuzer, Svenja Marquardt

IGC Proceedings (1997-2023)

Yaks (Bos grunniens) and crossbreds of yaks with different local cattle breeds are important for the livelihood of local herders in the Himalayas. They are often kept in a system of transhumance comprising the use of different pasture sites for grazing along an altitudinal gradient throughout the year. The animals are moved upwards to the high altitude pastures in spring/early summer and gradually moved downwards in late summer/autumn. Yaks are suitable for very high altitudes as they are especially adapted to low oxygen partial pressure, forage scarcity and cold and harsh environment (Wiener et al. 2003). However, …

Sustainable Behavior, Spring/Summer 2013, Issue 28

Sustain Magazine

No abstract provided.

The Effect Of Embryonic Arsenic Exposure On The Sensorimotor Behavior Of Zebrafish (Danio Rerio), Laura Paye

Honors College

The goal of this study is to determine the effect of arsenic exposure on vision in zebrafish (Danio rerio). The optic system of D. rerio is ideal for examining visual defects. Their eyes are similar to eyes of humans and can therefore be useful models in studies of human eye disease. Their optic system functions similarly to humans, so it is beneficial to observe how zebrafish are affected by contaminants in the environment. Arsenic is ubiquitous in groundwater, due to its natural presence in bed rock, but is elevated by human activities. In order to see any …

Movement Responses Inform Effectiveness And Consequences Of Baiting Wild Pigs For Population Control, Nathan P. Snow, Kurt C. Vercauteren

USDA Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) damage agricultural and natural resources throughout their nearly global distribution. Subsequently, population control activities (e.g., trapping, shooting, or toxic baiting) frequently involve the deployment of bait to attract wild pigs. A better understanding of how wild pigs respond to bait sites can help maximize efficiency of baiting programs and identify any potential pitfalls. We examined the movement behaviors of 68 wild pigs during three stages of intensive baiting programs (i.e., 15 days each: prior, during, and post baiting) spread across two distinct study areas in southern and northern Texas, USA. We found that bait sites needed …

Effect Of Water Velocity And Temperature On Energy Use, Behavior, And Mortality Of Pallid Sturgeon Scaphirhynchus Albus Larvae, Joseph Thomas Mrnak

Electronic Theses and Dissertations

Pallid Sturgeon Scaphirhynchus albus are a federally endangered species endemic to the Missouri River basin. Natural reproduction has been limited for decades and a recruitment bottleneck is hypothesized to occur during the larval stage of development. Understanding factors that affect survival of Pallid Sturgeon larvae is key given their critical status and ongoing recovery efforts. In this study, I evaluated the effects of water velocity and temperature on energy use, behavior, and mortality of endogenously feeding Pallid Sturgeon larvae (< 25 mm TL). In the first experiment, I examined the effect of water velocity (0 – 8.3 cm s⁻¹) on larval growth, energy density, swimming activity, and mortality. Larval growth rate at 16.3 °C was similar across …

Does Helping-At-The-Nest Help? The Case Of The Acorn Woodpecker, Walter D. Koenig, Eric L. Walters, Sahas Barve

Biological Sciences Faculty Publications

Cooperative breeding groups often involve "helpers-at-the-nest"; indeed, such behavior typically defines this intriguing breeding system. In few cases, however, has it been demonstrated that feeding nestlings by helpers, rather than some other behavior associated with helpers' presence, leads to greater reproductive success. One prediction of the hypothesis that feeding behavior per se is responsible for the fitness benefits conferred by helpers is that there should be close congruence between the patterns of helping-at-the-nest and the fitness effects of helpers. Here we look for such a relationship in the cooperatively breeding acorn woodpecker (Melanerpes formicivorus) in order to begin …

The Effects Of Density Gradients On The Distribution And Behavior Of Copepods, Connor Cayson

Theses

Observations of fine-scale behavioral dynamics of zooplankton may shed insight into much larger-scale ecosystem patterns and phenomena. Some zooplankton, such as copepods, are known to aggregate near density gradients; however, it is not clear the extent to which density gradients alone affect copepod distribution and behavior, since these gradients are often associated with phytoplankton layers. In this study, we investigated the behavior of Calanus pacificus in response to salinity gradients through laboratory experiments observed with high-resolution video and analyzed using computational techniques. Image data were collected using two cameras recording continuously for a duration of 30 minutes or more, allowing …

Bubble Stream Production By Belugas (Delphinapterus Leucas), Megan Slack

Theses

Bubble stream production in belugas has been poorly characterized and its function is not well understood. I examined behavioral states when producing bubble streams (“bubbling”), and when bubbling calls, to determine whether bubbling was significantly associated with a particular call category or behavioral state. Using 19 hours of video and audio recordings collected over a two-day period, I quantified bubble streams of a 4-month old calf and an unrelated adult female housed together. Based on the overall activity budgets and pool of vocalizations for both animals, I calculated the expected counts of bubble streams with and without vocalizations, assuming that …

An Evaluation Of Deterrent Methods Utilized To Prevent Crop Raiding By African Elephants (Loxodonta Africana) In The Kasigau Wildlife Corridor, Kenya, Rebecca Lynn Von Hagen

Masters Theses & Specialist Projects

Escalating human elephant conflict (HEC) continues to be a contributing factor

towards elephant decline, and crop raiding is the most common form of negative

human-elephant interactions. For communities that cannot reverse or prevent crop

raiding, it is necessary to contain HEC events through deterrent measures. Few

deterrent measures exist that combine practicality and affordability while also

preventing habituation by elephants. This project focused on comparing the efficacy of

deterrent methods to assess which was the most successful at preventing elephants

from entering crops in the farming community of Sasenyi, Kenya. In this paired-control

study, four deterrent methods were evaluated: acacia …

Elevated Carbon Dioxide Alters Neural Signaling And Anti-Predator Behaviors In Ocean Phase Coho Salmon (Oncorhynchus Kisutch), Chase Williams, Evan Gallagher, Andrew Dittman, Paul Mcelhany, Shallin Busch, Theo Bammler, James Macdonald

Salish Sea Ecosystem Conference

Elevated levels of CO2 have been shown to disrupt numerous neurological sensory systems in marine fish. This is of concern as Pacific salmon rely heavily on an important neurosensory system for survival, the olfactory system. In this study, we investigated the effects of elevated CO2 on a salmon olfactory driven behavior, as well as changes in neural signaling and gene expression within the peripheral and central olfactory system. Juvenile coho salmon were exposed to three different levels of CO2 for two weeks. These included a current CO2 level with a pH of 7.8, a medium CO2 level with a pH …

Does Eelgrass Act As An Ocean Acidification Refuge For Shellfish In The Salish Sea?, Bonnie Becker, Michelle Mccartha, Micah Horwith

Salish Sea Ecosystem Conference

Marine waters worldwide are becoming more acidic due to increasing atmospheric carbon dioxide levels. Changes in pH are heterogeneous in space and time and can be affected by physical and biological processes, including photosynthesis and respiration of plants and animals. Previous studies have shown that seagrass beds, which contain a large amount of plant biomass, can alter the carbonate chemistry in the immediate area, with higher pH during the day and lower pH at night. We explored the effects of this pattern on bivalve shellfish at four sites in Puget Sound and Willapa Bay. Pumped water samples were taken at …

A Systems Approach To Animal Communication, Eileen A. Hebets, Andrew B. Barron, Christopher N. Balakrishnan, Mark E. Hauber, Paul H. Mason, Kim L. Hoke

Eileen Hebets Publications

Why animal communication displays are so complex and how they have evolved are active foci of research with a long and rich history. Progress towards an evolutionary analysis of signal complexity, however, has been constrained by a lack of hypotheses to explain similarities and/or differences in signalling systems across taxa. To address this, we advocate incorporating a systems approach into studies of animal communication—an approach that includes comprehensive experimental designs and data collection in combination with the implementation of systems concepts and tools. A systems approach evaluates overall display architecture, including how components interact to alter function, and how function …

Response Of Fishes To Restoration Projects In Bayou St. John Located Within The City Of New Orleans, Louisiana, Including Hydrological Characterization And Hydrodynamic Modelling, Patrick W. Smith

University of New Orleans Theses and Dissertations

Quantifying the impacts of restoration on coastal waterways is crucial to understanding their effectiveness. Here, I look at the impacts of multiple restoration projects on urban waterways within the city limits of New Orleans, LA, with an emphasis on the response of fishes. First I report the effects of two projects designed to improve exchange down estuary on the hydrologic characteristics of Bayou St. John (BSJ). Within BSJ, flow is dominated by subtidal wind driven processes. Removal of an outdated flood control structure did not appear to alter exchange in BSJ, but removal combined with sector gate openings did. I …

Habitat Utilization And Vertical Distribution Of The Great Barracuda Sphyraena Barracuda (Edwards 1771) In The Western North Atlantic Using Electronic Archival Tags, Noah R. Hansen, David W. Kerstetter

Marine & Environmental Sciences Faculty Articles

The Great Barracuda Sphyraena barracuda is a large predatory teleost commonly seen in the tropics of the Western North Atlantic. Using pop-up satellite archival tags (PSATs), two large Great Barracuda (101 and 104 cm FL) were tagged off South Florida for a 15-day deployment period. Great Barracuda 88094 traveled 471 km minimum straight-line distance (MSLD) over the deployment duration, while Great Barracuda 88095 traveled 1231 km MSLD. Great barracuda 88094 achieved a maximum depth of 145.2 m, while 88095 to a maximum depth of 186.9 m, although such movements were for short time durations. The data obtained indicate significant differences …

Evaluating Sub-Lethal Effects Of Orchard-Applied Pyrethroids Using Video-Tracking Software To Quantify Honey Bee Behaviors, Erin M. Ingram, Julie Augustin, Marion D. Ellis, Blair Siegfried

Department of Entomology: Faculty Publications

Managed honey bee, Apis mellifera L., colonies are contracted to pollinate fruit and nut orchards improving crop quality and yield. Colonies placed in orchards are potentially exposed to pyrethroid insecticides used for broad-spectrum pest control. Pyrethroids have been reported to pose minimal risk to bees due to their low application rates in the field and putative repellent properties. This repellency is believed to alter foraging behavior with the benefit of preventing bees from encountering a lethal dose in the field. However, sub-lethal exposure to pyrethroids may adversely impact bee behavior potentially resulting in social dysfunction or disruption of foraging.

This …