Open Access. Powered by Scholars. Published by Universities.®

Life Sciences Commons

Open Access. Powered by Scholars. Published by Universities.®

Other Plant Sciences

Series

2017

Institution
Keyword
Publication

Articles 1 - 30 of 111

Full-Text Articles in Life Sciences

Developing An Environmentally And Economically Sustainable Sugar Kelp Aquaculture Industry In Southern New England: From Seed To Market, Charles Yarish, Jang K. Kim, Scott Lindell, Hauke Kits-Powell Nov 2017

Developing An Environmentally And Economically Sustainable Sugar Kelp Aquaculture Industry In Southern New England: From Seed To Market, Charles Yarish, Jang K. Kim, Scott Lindell, Hauke Kits-Powell

Department of Marine Sciences

The long-term goal of this proposed project was to promote development of a sustainable sugar kelp industry that can help revitalize working waterfronts, and increase employment and economic opportunities for seafood production, processing, and distribution services in Southern New England and New York. To achieve this goal, we have transfer cultivation techniques of Saccharina latissima (sugar kelp) from academic laboratories to commercially viable farms, introduce processing techniques, and provide templates for business plans. An additional benefit of this study are the ecosystem services afforded by sugar kelp farming. Kelp aquaculture will remove carbon and nitrogen (as well as phosphorus) from …


Developing An Environmentally And Economically Sustainable Sugar Kelp Aquaculture Industry In Southern New England: From Seed To Market, Charles Yarish, Jang Kyun Kim, Scott Lindell, Hauke Kite-Powell Nov 2017

Developing An Environmentally And Economically Sustainable Sugar Kelp Aquaculture Industry In Southern New England: From Seed To Market, Charles Yarish, Jang Kyun Kim, Scott Lindell, Hauke Kite-Powell

EEB Articles

The long-term goal of this proposed project was to promote development of a sustainable sugar kelp industry that can help revitalize working waterfronts, and increase employment and economic opportunities for seafood production, processing, and distribution services in Southern New England and New York. To achieve this goal, we have transfer cultivation techniques of Saccharina latissima (sugar kelp) from academic laboratories to commercially viable farms, introduce processing techniques, and provide templates for business plans. An additional benefit of this study are the ecosystem services afforded by sugar kelp farming. Kelp aquaculture will remove carbon and nitrogen (as well as phosphorus) from …


Substantial Contribution Of Genetic Variation In The Expression Of Transcription Factors To Phenotypic Variation Revealed By Erd-Gwas, Hung-Ying Lin, Qiang Liu, Xiao Li, Jinliang Yang, Sanzhen Liu, Yinlian Huang, Michael J. Scanlon, Dan Nettleton, Patrick S. Schnable Oct 2017

Substantial Contribution Of Genetic Variation In The Expression Of Transcription Factors To Phenotypic Variation Revealed By Erd-Gwas, Hung-Ying Lin, Qiang Liu, Xiao Li, Jinliang Yang, Sanzhen Liu, Yinlian Huang, Michael J. Scanlon, Dan Nettleton, Patrick S. Schnable

Department of Agronomy and Horticulture: Faculty Publications

Background: There are significant limitations in existing methods for the genome-wide identification of genes whose expression patterns affect traits.

Results: The transcriptomes of five tissues from 27 genetically diverse maize inbred lines were deeply sequenced to identify genes exhibiting high and low levels of expression variation across tissues or genotypes. Transcription factors are enriched among genes with the most variation in expression across tissues, as well as among genes with higher-than-median levels of variation in expression across genotypes. In contrast, transcription factors are depleted among genes whose expression is either highly stable or highly variable across genotypes. We developed a …


Estimation Of Irrigation Requirements For Drip-Irrigated Maize In A Sub-Humid Climate, Liu Yang, Hai-Shun Yang, Jiu-Sheng Li, Yan-Feng Li, Hai-Jun Yan Oct 2017

Estimation Of Irrigation Requirements For Drip-Irrigated Maize In A Sub-Humid Climate, Liu Yang, Hai-Shun Yang, Jiu-Sheng Li, Yan-Feng Li, Hai-Jun Yan

Department of Agronomy and Horticulture: Faculty Publications

Drip-irrigation is increasingly applied in maize (Zea mays L.) production in sub-humid region. It is critical to quantify irrigation requirements during different growth stages under diverse climatic conditions. In this study, the Hybrid-Maize model was calibrated and applied in a sub-humid Heilongjiang Province in Northeast China to estimate irrigation requirements for drip irrigated maize during different crop physiological development stages and under diverse agro-climatic conditions. Using dimensionless scales, the whole growing season of maize was divided into diverse development stages from planting to maturity. Drip-irrigation dates and irrigation amounts in each irrigation event were simulated and summarized in 30-year simulation …


Identifying Ecologically Relevant Scales Of Habitat Selection: Diel Habitat Selection In Elk, Caleb P. Roberts, James W. Cain Iii, Robert D. Cox Oct 2017

Identifying Ecologically Relevant Scales Of Habitat Selection: Diel Habitat Selection In Elk, Caleb P. Roberts, James W. Cain Iii, Robert D. Cox

Department of Agronomy and Horticulture: Faculty Publications

Although organisms make resource selection decisions at multiple spatiotemporal scales, not all scales are ecologically relevant to any given organism. Ecological patterns and rhythms such as behavioral and climatic patterns may provide a consistent method for identifying ecologically relevant scales of habitat selection. Using elk (Cervus canadensis) as an example species, we sought to test the ability of behavioral patterns to empirically partition diel scales for modeling habitat selection. We used model selection to partition diel scales by shifts in dominant behavior and then used resource selection probability functions to model elk habitat selection hierarchically at diel scales within seasons. …


Effects Of Nitrogen And Phosphorus Fertilizer And Topsoil Amendment On Native Plant Cover In Roadside Revegetation Projects, Heidi L. Hillhouse, Walter H. Schacht, Jonathan M. Soper, Carol E. Wienhold Oct 2017

Effects Of Nitrogen And Phosphorus Fertilizer And Topsoil Amendment On Native Plant Cover In Roadside Revegetation Projects, Heidi L. Hillhouse, Walter H. Schacht, Jonathan M. Soper, Carol E. Wienhold

Department of Agronomy and Horticulture: Faculty Publications

Establishing vegetation on roadsides following construction can be challenging, especially for relatively slow growing native species. Topsoil is generally removed during construction, and the surface soil following construction (“cut-slope soils”) is often compacted and low in nutrients, providing poor growing conditions for vegetation. Nebraska Department of Transportation (NDOT) protocols have historically called for nitrogen (N) and phosphorus (P) fertilization when planting roadside vegetation following construction, but these recommendations were developed for cool-season grass plantings and most current plantings use slower-establishing, native warmseason grasses that may benefit less than expected from current planting protocols. We evaluated the effects of nitrogen and …


Control Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Glufosinate-Resistant Soybean [Glycine Max (L.) Merr], Ethann R. Barnes, Stevan Z. Knezevic, Peter H. Sikkema, John L. Lindquist, Amit J. Jhala Aug 2017

Control Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Glufosinate-Resistant Soybean [Glycine Max (L.) Merr], Ethann R. Barnes, Stevan Z. Knezevic, Peter H. Sikkema, John L. Lindquist, Amit J. Jhala

Department of Agronomy and Horticulture: Faculty Publications

Common ragweed emerges early in the season in Nebraska, USA and is competitive with soybean; therefore, preplant herbicides are important for effective control. Glyphosate has been used as a preplant control option; however, confirmation of glyphosate-resistant (GR) common ragweed in Nebraska necessitates evaluating other herbicide options. The objectives of this study were to (1) evaluate the efficacy of preplant (PP) herbicides followed by (fb) glufosinate alone or in tank-mixture with imazethapyr, acetochlor, or S-metolachlor applied post-emergence (POST) for control of GR common ragweed in glufosinate-resistant soybean; (2) their effect on common ragweed density, biomass, and soybean yield; and (3) the …


Impact Of Seed Protein Alleles From Three Soybean Sources On Seed Composition And Agronomic Traits, Lillian F. Brzostowski, Timothy I. Pruski, James Specht, Brian W. Diers Aug 2017

Impact Of Seed Protein Alleles From Three Soybean Sources On Seed Composition And Agronomic Traits, Lillian F. Brzostowski, Timothy I. Pruski, James Specht, Brian W. Diers

Department of Agronomy and Horticulture: Faculty Publications

Evaluation of seed protein alleles in soybean populations showed that an increase in protein concentration is generally associated with a decrease in oil concentration and yield.

Soybean [Glycine max (L.) Merrill] meal is one of the most important plant-based protein sources in the world. Developing cultivars high in seed protein concentration and seed yield is a difficult task because the traits have an inverse relationship. Over two decades ago, a protein quantitative trait loci (QTL) was mapped on chromosome (chr) 20, and this QTL has been mapped to the same position in several studies and given the confirmed QTL …


Synergistic Use Of Remote Sensing And Modeling To Assess An Anomalously High Chlorophyll-A Event During Summer 2015 In The South Central Red Sea, Wenzhao Li, Hesham El-Askary, K. P. Manikandan, Mohamed A. Qurban, Michael J. Garay, Olga V. Kalishnikova Jul 2017

Synergistic Use Of Remote Sensing And Modeling To Assess An Anomalously High Chlorophyll-A Event During Summer 2015 In The South Central Red Sea, Wenzhao Li, Hesham El-Askary, K. P. Manikandan, Mohamed A. Qurban, Michael J. Garay, Olga V. Kalishnikova

Mathematics, Physics, and Computer Science Faculty Articles and Research

An anomalously high chlorophyll-a (Chl-a) event (>2 mg/m3) during June 2015 in the South Central Red Sea (17.5° to 22°N, 37° to 42°E) was observed using Moderate Resolution Imaging Spectroradiometer (MODIS) data from the Terra and Aqua satellite platforms. This differs from the low Chl-a values (<0.5 mg/m3) usually encountered over the same region during summertime. To assess this anomaly and possible causes, we used a wide range of oceanographical and meteorological datasets, including Chl-a concentrations, sea surface temperature (SST), sea surface height (SSH), mixed layer depth (MLD), ocean current velocity and aerosol optical depth (AOD) obtained from different sensors and models. Findings confirmed this anomalous behavior in the spatial domain using Hovmöller data analysis techniques, while a time series analysis addressed monthly and daily variability. Our analysis suggests that a combination of factors controlling nutrient supply contributed to the anomalous phytoplankton growth. These factors include horizontal transfer of upwelling water through eddy circulation and possible mineral fertilization from atmospheric dust deposition. Coral reefs might have provided extra nutrient supply, yet this is out of the scope of our analysis. We thought that dust deposition from a coastal dust jet event in late June, coinciding with the phytoplankton blooms in the area under investigation, might have also contributed as shown by our AOD findings. However, a lag cross correlation showed a two- month lag between strong dust outbreak and the high Chl-a anomaly. The high Chl-a concentration at the edge of the eddy emphasizes the importance of horizontal advection in fertilizing oligotrophic (nutrient poor) Red Sea waters.


Inferring Foliar Water Uptake Using Stable Isotopes Of Water, Gregory R. Goldsmith, Marco M. Lehmann, Lucas A. Cernusak, Matthias Arend, Rolf T.W. Siegwolf Jul 2017

Inferring Foliar Water Uptake Using Stable Isotopes Of Water, Gregory R. Goldsmith, Marco M. Lehmann, Lucas A. Cernusak, Matthias Arend, Rolf T.W. Siegwolf

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

A growing number of studies have described the direct absorption of water into leaves, a phenomenon known as foliar water uptake. The resultant increase in the amount of water in the leaf can be important for plant function. Exposing leaves to isotopically enriched or depleted water sources has become a common method for establishing whether or not a plant is capable of carrying out foliar water uptake. However, a careful inspection of our understanding of the fluxes of water isotopes between leaves and the atmosphere under high humidity conditions shows that there can clearly be isotopic exchange between the two …


Cellular And Molecular Targets Of Menthol Actions, Murat Oz, Eslam El Nebrisi, Keun-Hang Susan Yang, Frank Christopher Howarth, Lina T. Al Kury Jul 2017

Cellular And Molecular Targets Of Menthol Actions, Murat Oz, Eslam El Nebrisi, Keun-Hang Susan Yang, Frank Christopher Howarth, Lina T. Al Kury

Mathematics, Physics, and Computer Science Faculty Articles and Research

Menthol belongs to monoterpene class of a structurally diverse group of phytochemicals found in plant-derived essential oils. Menthol is widely used in pharmaceuticals, confectionary, oral hygiene products, pesticides, cosmetics, and as a flavoring agent. In addition, menthol is known to have antioxidant, anti-inflammatory, and analgesic effects. Recently, there has been renewed awareness in comprehending the biological and pharmacological effects of menthol. TRP channels have been demonstrated to mediate the cooling actions ofmenthol. There has been new evidence demonstrating thatmenthol can significantly influence the functional characteristics of a number of different kinds of ligand and voltage-gated ion channels, indicating that at …


Hydrogenation Of Organic Matter As A Terminal Electron Sink Sustains High Co2:Ch4 Production Ratios During Anaerobic Decomposition, Rachel M. Wilson, Malak M. Tfaily, Virginia I. Rich, Jason K. Keller, Scott D. Bridgham, Cassandra Medvedeff Zalman, Laura Meredith, Paul J. Hanson, Mark Hines, Laurel Pfeifer-Meister, Scott R. Saleska, Patrick Crill, William T. Cooper, Jeff P. Chanton, Joel E. Kostka Jul 2017

Hydrogenation Of Organic Matter As A Terminal Electron Sink Sustains High Co2:Ch4 Production Ratios During Anaerobic Decomposition, Rachel M. Wilson, Malak M. Tfaily, Virginia I. Rich, Jason K. Keller, Scott D. Bridgham, Cassandra Medvedeff Zalman, Laura Meredith, Paul J. Hanson, Mark Hines, Laurel Pfeifer-Meister, Scott R. Saleska, Patrick Crill, William T. Cooper, Jeff P. Chanton, Joel E. Kostka

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Once inorganic electron acceptors are depleted, organic matter in anoxic environments decomposes by hydrolysis, fermentation, and methanogenesis, requiring syntrophic interactions between microorganisms to achieve energetic favorability. In this classic anaerobic food chain, methanogenesis represents the terminal electron accepting (TEA) process, ultimately producing equimolar CO2 and CH4 for each molecule of organic matter degraded. However, CO2:CH4 production in Sphagnum-derived, mineral-poor, cellulosic peat often substantially exceeds this 1:1 ratio, even in the absence of measureable inorganic TEAs. Since the oxidation state of C in both cellulose-derived organic matter and acetate is 0, and CO2 has …


Protocol For Enrichment Of The Membrane Proteome Of Mature Tomato Pollen, Puneet Paul, Palak Chaturvedi, Anida Mesihovic, Arindam Ghatak, Wolfram Weckwerth, Enrico Schleiff Jun 2017

Protocol For Enrichment Of The Membrane Proteome Of Mature Tomato Pollen, Puneet Paul, Palak Chaturvedi, Anida Mesihovic, Arindam Ghatak, Wolfram Weckwerth, Enrico Schleiff

Department of Agronomy and Horticulture: Faculty Publications

We established and elaborated on a method to enrich the membrane proteome of mature pollen from economically relevant crop using the example of Solanum lycopersicum (tomato). To isolate the pollen protein fraction enriched in membrane proteins, a high salt concentration (750 mM of sodium chloride) was used. The membrane protein-enriched fraction was then subjected to shotgun proteomics for identification of proteins, followed by in silico analysis to annotate and classify the detected proteins.


Cover Crops: A Primer, Joshua J. Miller, Katja Koehler-Cole, Rodrigo Werle, Daren Redfearn Jun 2017

Cover Crops: A Primer, Joshua J. Miller, Katja Koehler-Cole, Rodrigo Werle, Daren Redfearn

Department of Plant Pathology: Faculty Publications

When deciding how best to use cover crops, it is important to consider the ultimate goal. Is it to increase soil organic matter, increase nutrient availability to subsequent crops, reduce soil compaction, supply forage for livestock, and/or suppress weeds? Answering these questions will help identify the cover crops that offer the best chance of success for meeting the goal. Primarily, cover crops are used to enhance soil conservation, nutrient cycling and supply, and weed control. However, these benefits vary based on the species of cover crop that is planted, so it is important to select the crop type that will …


First Report Of Xanthomonas Vasicola Causing Bacterial Leaf Streak On Corn In The United States, K. A. Korus, J. M. Lang, A. O. Adesemoye, C. C. Block, N. Pal, J. E. Leach, T. A. Jackson-Ziems Jun 2017

First Report Of Xanthomonas Vasicola Causing Bacterial Leaf Streak On Corn In The United States, K. A. Korus, J. M. Lang, A. O. Adesemoye, C. C. Block, N. Pal, J. E. Leach, T. A. Jackson-Ziems

Department of Plant Pathology: Faculty Publications

In 2014 and 2015, Zea mays samples (field, seed, and popcorn) were submitted to the Plant and Pest Diagnostic Clinic at the University of Nebraska–Lincoln displaying long, dark, yellow to brown, water-soaked, linear lesions confined to the interveinal spaces of the leaves. Initial symptoms appeared as small water-soaked flecks that expanded between veins to form irregular lesions. In some cases, the disease progressed to cover 40 to 50% of the leaf area. The disease was confirmed by symptom expression and bacterial streaming in 41 counties in Nebraska as well as Yuma Co., Colorado, and Phillips Co., Kansas, both contiguous to …


Transcriptomic Resources For The Medicinal Legume Mucuna Pruriens: De Novo Transcriptome Assembly, Annotation, Identification And Validation Of Est-Ssr Markers, N. Sathyanarayana, Ranjith Kumar Pittala, Pankaj Kumar Tripathi, Ratan Chopra, Heikham Russiachand Singh, Vikas Belamkar, Pardeep Kumar Bhardwaj, Jeff J. Doyle, Ashley N. Egan May 2017

Transcriptomic Resources For The Medicinal Legume Mucuna Pruriens: De Novo Transcriptome Assembly, Annotation, Identification And Validation Of Est-Ssr Markers, N. Sathyanarayana, Ranjith Kumar Pittala, Pankaj Kumar Tripathi, Ratan Chopra, Heikham Russiachand Singh, Vikas Belamkar, Pardeep Kumar Bhardwaj, Jeff J. Doyle, Ashley N. Egan

Department of Agronomy and Horticulture: Faculty Publications

Background:

The medicinal legume Mucuna pruriens (L.) DC. has attracted attention worldwide as a source of the anti-Parkinson’s drug L-Dopa. It is also a popular green manure cover crop that offers many agronomic benefits including high protein content, nitrogen fixation and soil nutrients. The plant currently lacks genomic resources and there is limited knowledge on gene expression, metabolic pathways, and genetics of secondary metabolite production. Here, we present transcriptomic resources for M. pruriens, including a de novo transcriptome assembly and annotation, as well as differential transcript expression analyses between root, leaf, and pod tissues. We also develop microsatellite markers …


Physiological Responses Of Scaevola Aemula Seedlings Under High Temperature Stress, B He, T Guo, H Huang, W Xi, Xiaoyong Chen May 2017

Physiological Responses Of Scaevola Aemula Seedlings Under High Temperature Stress, B He, T Guo, H Huang, W Xi, Xiaoyong Chen

Faculty Research and Creative Activity

Global climate change is expected to result in a relative high frequency of a short period of extreme high temperature (HT) on plant ecosystems and can have an adverse impact on plant growth and development, yet the response of plants to such damage is not fully understood. In this study, physiological responses of Scaevola aemula seedlings to a short-term(a 3-day period) HT stress were investigated in order to examine the adaptation of S. aemula to the thermal environment. The S. aemula seedlings were cultivated under four temperature treatments of 25/20, 35/27, 40/30, 46/35 °C (day/night). The HT stress-induced injure symptoms …


A Comprehensive Analysis Of Alternative Splicing In Paleopolyploid Maize, Wenbin Mei, Sanzhen Liu, James C. Schnable, Cheng-Ting Yeh, Nathan M. Springer, Patrick S. Schnable, William Brad Barbazuk May 2017

A Comprehensive Analysis Of Alternative Splicing In Paleopolyploid Maize, Wenbin Mei, Sanzhen Liu, James C. Schnable, Cheng-Ting Yeh, Nathan M. Springer, Patrick S. Schnable, William Brad Barbazuk

Department of Agronomy and Horticulture: Faculty Publications

Identifying and characterizing alternative splicing (AS) enables our understanding of the biological role of transcript isoform diversity. This study describes the use of publicly available RNA-Seq data to identify and characterize the global diversity of AS isoforms in maize using the inbred lines B73 and Mo17, and a related species, sorghum. Identification and characterization of AS within maize tissues revealed that genes expressed in seed exhibit the largest differential AS relative to other tissues examined. Additionally, differences in AS between the two genotypes B73 and Mo17 are greatest within genes expressed in seed. We demonstrate that changes in the level …


Predicting Trait-Environment Relationships For Venation Networks Elong An Andes-Amazon Elevation Gradient, Benjamin Blonder, Norma Salinas, Lisa Patrick Bentley, Alexander Shenkin, Percy O. Chambi Porroa, Yolvi Valdez Tejeira, Cyrille Violle, Nikolaos M. Fyllas, Gregory R. Goldsmith, Roberta E. Martin, Gregory P. Asner, Sandra Diaz, Brian J. Enquist, Yadvinder Malhi Apr 2017

Predicting Trait-Environment Relationships For Venation Networks Elong An Andes-Amazon Elevation Gradient, Benjamin Blonder, Norma Salinas, Lisa Patrick Bentley, Alexander Shenkin, Percy O. Chambi Porroa, Yolvi Valdez Tejeira, Cyrille Violle, Nikolaos M. Fyllas, Gregory R. Goldsmith, Roberta E. Martin, Gregory P. Asner, Sandra Diaz, Brian J. Enquist, Yadvinder Malhi

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Understanding functional trait-environment relationships (TERs) may improve predictions of community assembly. However, many empirical TERs have been weak or lacking conceptual foundation. TERs based on leaf venation networks may better link individuals and communities via hydraulic constraints. We report measurements of vein density, vein radius, and leaf thickness for more than 100 dominant species occurring in ten forest communities spanning a 3,300 m Andes-Amazon elevation gradient in Peru. We use these data to measure the strength of TERs at community scale and to determine whether observed TERs are similar to those predicted by physiological theory. We found strong support for …


Ultramafic Geoecology Of South And Southeast Asia, M.L. Galey, A. Van Der Ent, M.C.M. Iqbal, N. Rajakaruna Apr 2017

Ultramafic Geoecology Of South And Southeast Asia, M.L. Galey, A. Van Der Ent, M.C.M. Iqbal, N. Rajakaruna

Biological Sciences

Globally, ultramafic outcrops are renowned for hosting foras with high levels of endemism, including plants with specialised adaptations such as nickel or manganese hyperaccumulation. Soils derived from ultramafic regoliths are generally nutrient-deficient, have major cation imbalances, and have concomitant high concentrations of potentially phytotoxic trace elements, especially nickel. The South and Southeast Asian region has the largest surface occurrences of ultramafic regoliths in the world, but the geoecology of these outcrops is still poorly studied despite severe conservation threats. Due to the paucity of systematic plant collections in many areas and the lack of georeferenced herbarium records and databased information, …


The Taxonomy, Reproduction, And Distribution Of Rare Plants: A Study Of Magnolia Sp. In The Río Zuñac Reserve, Ecuador, Alyssa Kullberg Apr 2017

The Taxonomy, Reproduction, And Distribution Of Rare Plants: A Study Of Magnolia Sp. In The Río Zuñac Reserve, Ecuador, Alyssa Kullberg

Independent Study Project (ISP) Collection

Ecuadorian cloud forests are biodiversity hotspots and centers of unprecedented levels of endemism, but they are also under-researched and under-protected. This study took place in the Río Zuñac Reserve, which is a reserve of about 850 ha located in the Tungurahua province of Ecuador, and is home to at least 20 endemic plant species. Three new species of Magnolia have been discovered in this reserve in the past five years: Magnolia llanganates, Magnolia vargasiana, and one species that has yet to be formally described. This study dealt with accurately locating and describing new individuals of these species over the …


Emergence, Competition, And Management Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Nebraska Soybean, Ethann R. Barnes Apr 2017

Emergence, Competition, And Management Of Glyphosate-Resistant Common Ragweed (Ambrosia Artemisiifolia L.) In Nebraska Soybean, Ethann R. Barnes

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Common ragweed (Ambrosia artemisiifolia L.) is a competitive annual broadleaf weed in soybean (Glycine max) production fields throughout North America. The recent confirmation of glyphosate-resistant common ragweed in Nebraska justified the need to assess the emergence pattern and competitive ability of common ragweed in soybean and to evaluate alternative herbicide programs for effective management. The objectives of this research were to: 1) evaluate the effect of tillage and develop a predictive model for the emergence pattern of common ragweed in Nebraska; 2) model the competitive interaction between soybean and common ragweed as influenced by density and irrigation …


Investigation De Regeneración Natural De Plantas Vasculares En La Reserva Madrigal Del Podocarpus / Investigation Of Natural Regeneration Of Vascular Plants In The Madrigal Reserve Of The Podocarpus, Sy Baker Apr 2017

Investigation De Regeneración Natural De Plantas Vasculares En La Reserva Madrigal Del Podocarpus / Investigation Of Natural Regeneration Of Vascular Plants In The Madrigal Reserve Of The Podocarpus, Sy Baker

Independent Study Project (ISP) Collection

En el Sur de Ecuador, hay una historia larga de incendio que está asociada con la historia de la agricultura y ganadería a causa de las técnicas de tala y quema para despejar áreas para campos y también quemaduras intencionales para fertilizar los suelos y mejorar productividad agrícola (Fernandez et al 2015). En los últimos días de Noviembre de 2016, un incendio quemó campos, la Reserva Madrigal de Podocarpus, y parte del Parque Nacional Podocarpus en Loja, Ecuador—el enfoque de este estudio. En este estudio: (1) se registraron las especies y distribución de plantas pioneras y sobrevivientes, (2) la se …


Surveying The Distributions Of Melaleuca Quinquenervia, Psidium Cattleianum, And Litsea Glutinosa At Analalava Special Reserve, Hanusia Higgins Apr 2017

Surveying The Distributions Of Melaleuca Quinquenervia, Psidium Cattleianum, And Litsea Glutinosa At Analalava Special Reserve, Hanusia Higgins

Independent Study Project (ISP) Collection

This study surveyed the distributions of three invasive plant species, Melaleuca quinquenervia, Psidium cattleianum, and Litsea glutinosa at the Analalava Special Reserve in Mahavelona, Madagascar. Analalava is a 229-hectare degraded patch of low-elevation humid forest on the northeast coast of Madagascar, and one of the last forest fragments remaining in the region. It is a haven for biodiversity, containing 343 recorded species of plants, 12 of which are locally endemic. Invasive species are considered the second-most significant threat to biodiversity, both worldwide and specifically at Analalava. Based on a systematic transect survey of these three targeted invasive species, their distributions …


Novel Gene-Sequence Markers For Isolate Tracking Within Monilinia Fructicola Lesions, Madeline E. Dowling, Guido Schnabel, Harriet G. Boatwright, Sydney E. Everhart Feb 2017

Novel Gene-Sequence Markers For Isolate Tracking Within Monilinia Fructicola Lesions, Madeline E. Dowling, Guido Schnabel, Harriet G. Boatwright, Sydney E. Everhart

Department of Plant Pathology: Faculty Publications

Background: Monilinia fructicola is a diverse pathogen of pome and stone fruits that causes severe economic losses each year. However, little is known about inoculum flow within or between orchards and pathogen establishment in an orchard, because few methods exist for detecting diversity or tracking isolates over time. SSR loci are an effective option, but may be confounded by a high degree of mutability and potential sensitivity to abiotic stress.

Results: Through transcriptome analysis, we identified novel markers mrr1, DHFR and MfCYP01 and validated stability of these markers under fungicide stress in natural infection sites. Nucleotide variation …


Corn Residue Use By Livestock In The United States, Marty R. Schmer, Rachael M. Brown, Virginia L. Jin, Robert B. Mitchell, Daren D. Redfearn Jan 2017

Corn Residue Use By Livestock In The United States, Marty R. Schmer, Rachael M. Brown, Virginia L. Jin, Robert B. Mitchell, Daren D. Redfearn

Department of Agronomy and Horticulture: Faculty Publications

Corn (Zea mays L.) residue grazing or harvest provides a simple and economical practice to integrate crops and livestock, but limited information is available on how widespread corn residue utilization is practiced by US producers. In 2010, the USDA Economic Research Service surveyed producers from 19 states on corn grain and residue management practices. Total corn residue grazed or harvested was 4.87 million ha. Approximately 4.06 million ha was grazed by 11.7 million livestock (primarily cattle) in 2010. The majority of grazed corn residue occurred in Nebraska (1.91 million ha), Iowa (385,000 ha), South Dakota (361,000 ha), and Kansas …


The Magnaporthe Oryzae Nitrooxidative Stress Response Suppresses Rice Innate Immunity During Blast Disease, Margarita Marroquin-Guzman, David E. Hartline, Janet D. Wright, Christian G. Elowsky, Travis J. Bourret, Richard A. Wilson Jan 2017

The Magnaporthe Oryzae Nitrooxidative Stress Response Suppresses Rice Innate Immunity During Blast Disease, Margarita Marroquin-Guzman, David E. Hartline, Janet D. Wright, Christian G. Elowsky, Travis J. Bourret, Richard A. Wilson

Department of Plant Pathology: Faculty Publications

Understanding how microorganisms manipulate plant innate immunity and colonize host cells is a major goal of plant pathology. Here, we report that the fungal nitrooxidative stress response suppresses host defenses to facilitate the growth and development of the important rice pathogen Magnaporthe oryzae in leaf cells. Nitronate monooxygenases encoded by NMO genes catalyze the oxidative denitrification of nitroalkanes. We show that the M. oryzae NMO2 gene is required for mitigating damaging lipid nitration under nitrooxidative stress conditions and, consequently, for using nitrate and nitrite as nitrogen sources. On plants, the Δnmo2 mutant strain penetrated host cuticles like wild type, …


The Morphogenesis-Related Ndr Kinase Pathway Of Colletotrichum Orbiculare Is Required For Translating Plant Surface Signals Into Infection-Related Morphogenesis And Pathogenesis, Sayo Kodama, Junya Ishizuka, Ito Miyashita, Takaaki Ishii, Takumi Nishiuchi, Hideto Miyoshi, Yasuyuki Kubo Jan 2017

The Morphogenesis-Related Ndr Kinase Pathway Of Colletotrichum Orbiculare Is Required For Translating Plant Surface Signals Into Infection-Related Morphogenesis And Pathogenesis, Sayo Kodama, Junya Ishizuka, Ito Miyashita, Takaaki Ishii, Takumi Nishiuchi, Hideto Miyoshi, Yasuyuki Kubo

Department of Plant Pathology: Faculty Publications

Plant infection by pathogenic fungi involves the differentiation of appressoria, specialized infection structures, initiated by fungal sensing and responding to plant surface signals. How plant fungal pathogens control infection-related morphogenesis in response to plant-derived signals has been unclear. Here we showed that the morphogenesis-related NDR kinase pathway (MOR) of the cucumber anthracnose fungus Colletotrichum orbiculare is crucial for appressorium development following perception of plant-derived signals. By screening of random insertional mutants, we identified that the MOR element CoPag1 (Perish-in-theabsence-of-GYP1) is a key component of the plant-derived signaling pathway involved in appressorium morphogenesis. Constitutive activation of the NDR kinase …


Phenotypic And Genotypic Characterization Of Relevant Sclerotinia Sclerotiorum Isolates, Thomas J. Justo Miorini, Anthony G. Pannullo, T. Hornby, Robert Higgins, Sydney E. Everhart, James R. Steadman Jan 2017

Phenotypic And Genotypic Characterization Of Relevant Sclerotinia Sclerotiorum Isolates, Thomas J. Justo Miorini, Anthony G. Pannullo, T. Hornby, Robert Higgins, Sydney E. Everhart, James R. Steadman

Department of Plant Pathology: Faculty Publications

Knowledge of pathogen population structure is useful to identify isolates for screening cultivars and lines for resistance. For S. sclerotiorum, causal agent of white mold in more than 400 plant species, including common bean and soybean, breeding for resistance is particularly challenging. The objective of this study was to characterize phenotypic and genotypic variation of S. sclerotiorum isolates from soybean production areas of the U.S.A. (15), Brazil (75), and Argentina (5) to compare them with 366 isolates from dry bean characterized previously (Everhart et al., 2016).


Muti Site Screening Identifies And Verifies Levels Of Resistance To White Mold In Common Bean In 2016, Robert Higgins, James R. Steadman Jan 2017

Muti Site Screening Identifies And Verifies Levels Of Resistance To White Mold In Common Bean In 2016, Robert Higgins, James R. Steadman

Department of Plant Pathology: Faculty Publications

The development of common bean cultivars with partial resistance and/ or avoidance to white mold (WM) caused by Sclerotinia sclerotiorum would benefit producers by reducing yield loss and reducing input costs for fungicides. Our main objective in this study is to identify bean germplasm supplied by bean breeders from across the USA and Belgium with levels of partial resistance to WM. Breeders sent seed of 9 bean lines for field testing and 25 bean lines for greenhouse testing with putative sources of resistance to our laboratory. The seeds were divided in equal amounts for field (400g/line) and/or greenhouse (25 seeds/ …