Life Sciences Commons^™

Nursing Females Are More Prone To Heat Stress: Demography Matters When Managing Flying-Foxes For Climate Change, Stephanie T. Snoyman, Jasmina Munich, Culum Brown

Ecological Impacts of Climate Change Collection

Determining the underlying mechanisms responsible for species-specific responses to climate change is important from a species management perspective. The grey-headed flying-fox, Pteropus poliocephalus, is listed as vulnerable but it also a significant pest species for orchardists and thereby presents an interesting management conundrum. Over the last century, the abundance of the grey-headed flying-fox, P. poliocephalus, in Australia has decreased due to a variety of threatening processes but has increased in abundance in urban areas. These flying-foxes are highly susceptible to extreme heat events which are predicted to increase in the future under climate change scenarios. Exceptionally hot days result in …

Depth-Variable Settlement Patterns And Predation Influence On Newly Settled Reef Fishes (Haemulon Spp., Haemulidae), Lance K. B. Jordan, Kenyon C. Lindeman, Richard E. Spieler

Marine & Environmental Sciences Faculty Articles

During early demersal ontogeny, many marine fishes display complex habitat-use patterns. Grunts of the speciose genus Haemulon are among the most abundant fishes on western North Atlantic coral reefs, with most species settling to shallow habitats (≤12 m). To gain understanding into cross-shelf distributional patterns exhibited by newly settled stages of grunts (<2 cm total length), we examined: 1) depth-specific distributions of congeners at settlement among sites at 8 m, 12 m, and 21 m, and 2) depth-variable predation pressure on newly settled individuals (species pooled). Of the six species identified from collections of newly settled specimens (n = 2125), Haemulon aurolineatum (tomtate), H. flavolineatum(French grunt), and H. striatum (striped grunt) comprised 98% of the total abundance; with the first two species present at all sites. Prevalence of H. aurolineatum and H. flavolineatumdecreased substantially from the 8-m site to the two deeper sites. In contrast, …

Collaborative Research: Life Histories Of Species In The Genus Calanus In The North Atlantic And North Pacific Oceans And Responses To Climate Forcing, Jeffrey Runge, Andrew J. Pershing

University of Maine Office of Research Administration: Grant Reports

Species in the genus Calanus are predominant in the mesozooplankton of the North Atlantic and North Pacific Oceans. Their key role in marine food web interactions has been recognized in GLOBEC programs, both in the U.S. and internationally. Considerable knowledge of life history characteristics, including growth, reproduction, mortality, diapause behavior and demography has been acquired from both laboratory experiments and measurements at sea. This project reviews and synthesizes this knowledge and uses it to develop an Individual Based Life Cycle model for sibling species in two sympatric species pairs, C.marshallae and C. pacificus in the North Pacific Ocean and C. …

Global Trophic Position Comparison Of Two Dominant Mesopelagic Fish Families (Myctophidae, Stomiidae) Using Amino Acid Nitrogen Isotopic Analyses, C. Anela Choy, Peter C. Davison, Jeffrey C. Drazen, Adrian Flynn, Elizabeth J. Gier, Joel C. Hoffman, Jennifer P. Mcclain-Counts, Todd W. Miller, Brian N. Popp, Steve W. Ross, Tracey Sutton

Marine & Environmental Sciences Faculty Articles

The δ15N values of organisms are commonly used across diverse ecosystems to estimate trophic position and infer trophic connectivity. We undertook a novel cross-basin comparison of trophic position in two ecologically well-characterized and different groups of dominant mid-water fish consumers using amino acid nitrogen isotope compositions. We found that trophic positions estimated from the δ15N values of individual amino acids are nearly uniform within both families of these fishes across five global regions despite great variability in bulk tissue δ15N values. Regional differences in the δ15N values of phenylalanine confirmed that bulk tissue δ15N values reflect region-specific water mass biogeochemistry …

Air-Sea Interface In Hurricane Conditions, Alexander Soloviev, A. Fujimura, Silvia Matt

Marine & Environmental Sciences Faculty Articles

Improving hurricane prediction models requires better understanding of complex processes taking place at the air-sea interface at high wind speeds. The change of the air-sea interaction regime in hurricane conditions has been linked to the mechanism of direct disruption of the air-sea interface by pressure fluctuations working against the surface tension force. This can be achieved through the Kelvin-Helmholtz type instability. In order to investigate this mechanism, we have conducted a series of 3D numerical experiments using a volume of fluid multiphase model. The experiments were initialized with either a flat interface or short wavelets and wind stress applied at …

Dissertation Research: Eco-Evolutionary Effects Of An Aquatic Consumer: Linking Phenotypic Diversity To Community And Ecosystem Responses, Kevin S. Simon, Quenton Tuckett, Michael T. Kinnison

University of Maine Office of Research Administration: Grant Reports

This research addresses the interaction between ecological and evolutionary processes by examining the recent evolution of a common invasive fish species, the white perch, in lakes and the consequences of this evolution for community and ecosystem dynamics. White perch have successfully invaded lakes spanning a productivity gradient, which provides diverse selective pressures that may result in altered fish morphology, physiology and ecological role. Adaptation by these fish may, in turn, feed back to affect lake productivity and community structure through several ecological and chemical pathways. This project tests the hypothesis that this rapid evolutionary divergence within a single species has …

Bioenergy Harvesting Impacts On Ecologically Important Stand Structure And Habitat Characteristics, Caitlin E. Littlefield, William S. Keeton

Rubenstein School of Environment and Natural Resources Faculty Publications

Demand for forest bioenergy fuel is increasing in the northern forest region of eastern North America and beyond, but ecological impacts, particularly on habitat, of bioenergy harvesting remain poorly explored in the peer-reviewed literature. Here, we evaluated the impacts of bioenergy harvests on stand structure, including several characteristics considered important for biodiversity and habitat functions. We collected stand structure data from 35 recent harvests in northern hardwood-conifer forests, pairing harvested areas with unharvested reference areas. Biometrics generated from field data were analyzed using a multi-tiered nonparametric uni-and multivariate statistical approach. In analyses comparing harvested to reference areas, sites that had …

Nantucket Shellfish Management Plan, Matthew Herr, Frank Dutra, Tara Riley, Sarah Oktay, Peter Boyce, Doug Smith, Carl Sjolund, Jake Kritzer, Cormac Collier, Dave Fronzuto, Kristin Uiterwyk, Jack Wiggin, Dale Leavitt, Steve Bliven, Allison Novelly, Dan Hellin

Urban Harbors Institute Publications

Nantucket’s shellfisheries are significant both locally and nationally. Locally, commercial and recreational shellfishing are critical to the Island’s history, culture, and economy. Nationally, the Island’s largest commercial shellfishery — the Nantucket bay scallop fishery is one of the last wild-harvest bay scallop fisheries in the country, but there is growing concern over the health of the overall population and the sustainability of the fishery. Given the importance of the shellfisheries on Nantucket and the drastic decline of bay scallop populations elsewhere along the Atlantic coast, there is a compelling interest in ensuring that the Town’s shellfish are managed to sustain …

Phylogenetics Links Monster Larva To Deep-Sea Shrimp., Heather D Bracken-Grissom, Darryl L Felder, Nicole L Vollmer, Joel W Martin, Keith A Crandall

Computational Biology Institute

Mid-water plankton collections commonly include bizarre and mysterious developmental stages that differ conspicuously from their adult counterparts in morphology and habitat. Unaware of the existence of planktonic larval stages, early zoologists often misidentified these unique morphologies as independent adult lineages. Many such mistakes have since been corrected by collecting larvae, raising them in the lab, and identifying the adult forms. However, challenges arise when the larva is remarkably rare in nature and relatively inaccessible due to its changing habitats over the course of ontogeny. The mid-water marine species Cerataspis monstrosa (Gray 1828) is an armored crustacean larva whose adult identity …

Light And Vision In The Deep-Sea Benthos: I. Bioluminescence At 500-1000 M Depth In The Bahamian Islands, Sönke Johnsen, Tamara M. Frank, Steven H.D. Haddock, Edith A. Widder, Charles G. Messing

Marine & Environmental Sciences Faculty Articles

Bioluminescence is common and well studied in mesopelagic species. However, the extent of bioluminescence in benthic sites of similar depths is far less studied, although the relatively large eyes of benthic fish, crustaceans and cephalopods at bathyal depths suggest the presence of significant biogenic light. Using the Johnson-Sea-Link submersible, we collected numerous species of cnidarians, echinoderms, crustaceans, cephalopods and sponges, as well as one annelid from three sites in the northern Bahamas (500–1000 m depth). Using mechanical and chemical stimulation, we tested the collected species for light emission, and photographed and measured the spectra of the emitted light. In addition, …

Development And Characterization Of 11 Novel Microsatellite Loci For The Roundscale Spearfish Tetrapturus Georgii And Their Cross-Species Amplification Among Other Istiophorid Species, Andrea M. Bernard, Kevin A. Feldheim, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Articles

Eleven novel polymorphic microsatellite loci were developed and characterized for the recently validated roundscale spearfish Tetrapturus georgii. Characterization of these markers, based on 35 roundscale spearfish from the western North Atlantic, revealed two to 21 alleles per locus with an average expected heterozygosity (HE) of 0·09–0·94, and all loci conformed to Hardy–Weinberg expectations. Cross-amplification of these 11 loci against all other eight known istiophorid species indicates promising prospects for the utility of these markers for istiophorids in general.

Light And Vision In The Deep-Sea Benthos: Ii. Vision In Deep-Sea Crustaceans, Tamara M. Frank, Sönke Johnsen, Thomas W. Cronin

Marine & Environmental Sciences Faculty Articles

Using new collecting techniques with the Johnson-Sea-Link submersible, eight species of deep-sea benthic crustaceans were collected with intact visual systems. Their spectral sensitivities and temporal resolutions were determined shipboard using electroretinography. Useable spectral sensitivity data were obtained from seven species, and in the dark-adapted eyes, the spectral sensitivity peaks were in the blue region of the visible spectrum, ranging from 470 to 497 nm. Under blue chromatic adaptation, a secondary sensitivity peak in the UV portion of the spectrum appeared for two species of anomuran crabs:Eumunida picta (λ_max 363 nm) and Gastroptychus spinifer (λ_max 383 nm). Wavelength-specific …

Limnological Assistance For Lake Mead National Recreation Area: Quarterly Report, Period Ending September 30, 2012, Margaret N. Rees

Limnological Studies

Continuation of Project 1

• The research effort titled Growth of adult quagga mussels within Las Vegas Wash/Las Vegas Bay is ongoing.

Continuation of Project 2

• Additional content was contributed to the future NPS-funded U.S. Geological Survey Circular ‘state-of-the-science’ report for Lakes Mead and Mohave. UNLV performed a new co-editing and coordinating task related to this product as the major focus of this quarter’s effort; the master version of this report is on schedule for delivery to the editorial team during the first week of October 2012.

Modification Activities:

Extended Short-term Continued Limnological Assistance

Quagga Mussel Objectives:

• Most juvenile/adult quagga mussel …

Small-Scale Mapping Of Indeterminate Arborescent Acroporid Coral (Acropora Cervicornis) Patches, Brian K. Walker, E. A. Larson, Alison L. Moulding, David S. Gilliam

Marine & Environmental Sciences Faculty Articles

Western Atlantic populations of the staghorn coral Acropora cervicornis have drastically declined over the past few decades. Hence, interest in its ecology and spatial extent has increased. Acroporid corals with indeterminate arborescent growth like A.cervicornis primarily reproduce asexually by fragmentation, which can lead to extensive monotypic patches. Since fragmentation is a major component in indeterminate acroporid reproduction, these patches may expand or move over time. Periodic perimeter mapping facilitates comparison of patch areas to determine movement or expansion. A repeatable, low-cost method using a differential GPS carried by a snorkeler was employed to map the perimeter of A.cervicornis …

Biodegradation Of Textile Dye Anthraquinone Vat Blue 4 By Pseudomonas Aeruginosa, Rajee Olaganathan, Jamila Patterson

Publications

Uncontaminated and Vat blue 4 contaminated soil were screened for heterotrophic bacterial population and the bacterial density were found to be 19.3 X 104 and 5.5 X 104 CFU/gm respectively. The bacterial genera of dye contaminated soil was dominated by Pseudomonas sp. (32.5 %) followed by Bacillus sp. (27.5 %), Aeromonas sp. (15.0 %), Micrococcus sp. (12.5 %) and Achromobacter sp. (12.5 %). The optimum inoculums load, pH and temperature were found to be 5%, 7 and 35oC respectively. The initial pH of the effluent prepared using Vat Blue 4 was 8.5. The free cells of P. aeruginosa reduced the …

Understanding The Success And Failure Of Oyster Populations: Periodicities Of Perkinsus Marinus, And Oyster Recruitment, Mortality, And Size, Thomas M. Soniat, John M. Klinck, Eric N. Powell, Eileen E. Hofmann

CCPO Publications

Ten-year time series (1992 to 2002) of salinity, Dermo disease, and size-class structure and mortality measured for an eastern oyster (Crassostrea virginica) population at a reef in Bay Tambour, Terrebonne Parish, LA, were analyzed using wavelet techniques to determine dominant frequencies and correlations. Along the Gulf Coast of the United States, Dermo disease (caused by Perkinsus marinus) responds to the El Nino-Southern Oscillation (ENSO) climate signal through its response to salinity. During the La Nina portion of ENSO, decreased rainfall leads to an increase in salinity, which triggers a rise in Dermo disease prevalence and intensity, producing increased oyster mortality. …

Characterization Of Benthic Communities, Gregory A. Piniak, Shay Viehman, Christine M. Addison, Nicole D. Fogarty

Marine & Environmental Sciences Faculty Reports

No abstract provided.

The Bathypelagic Biome Of The Atlantic Ocean: Character And Ecological Discreteness Of The Fish Fauna, Tracey Sutton, Odd Aksel Bergstad, Ann Bucklin, Scott E. Burghart, April B. Cook, Tone Falkenhaug, T. L. Hopkins, F. M. Porteiro, Sigrid Schiel, Joseph J. Torres, M. Vecchione, Peter Wiebe

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Recent global synthetic analyses have revealed that marine taxonomic inventories are far from complete, nowhere more so than in the deep-pelagic ocean. At over a billion km3, it is the largest biome on Earth, yet only a tiny fraction of the biogeographic records include the bathypelagic fauna. This data gap served as the impetus for recent deepwater surveys, many of which have altered our perceptions of pelagic ecosystems. Here we examine data from four deep-pelagic (0-5000+ m) sampling programs in the Atlantic (60°N-25°S) in order to assess the character of bathypelagic fish communities with respect to faunal distinctiveness and ecological …

Pastoral Lease Assessment Using Geospatial Analysis, T P. Robinson, P E. Novelly, R Corner, Philip Thomas, A Russell-Browm

Resource management technical reports

Seven remote sensing based Vegetation Indices (NDSVI, STVI-3, NDVI, Green + Red, Red, Land Monitor and STVI-1) were tested for their potential to discriminate between “poor” and “good” range condition assessments in Western Australia’s pastoral rangelands. Indices were computed using the Australian Greenhouse Office National Carbon Accounting System (AGO NCAS) repository of calibrated Landsat TM/ETM+ mosaics. Discrimination potential was assessed at two levels of stratification – station level (identical to the stratification used to collect the traverse data), and functional group level (an aggregation of similar land systems);

The Consumption Of Dha During Embryogenesis As An Indicative Of The Need To Supply Dha During Early Larval Development: A Review, Joana Figueiredo, Junda Lin, Justin Anto, Luis Narciso

Marine & Environmental Sciences Faculty Articles

The establishment of an adequate larval diet for crustacean and fish often involves a series of time-consuming and expensive trial and errors. Despite being nutritionally poor, rotifers and Artemia are the most commonly used preys in larviculture. Whether (and to what extent) the prey needs to be enriched with essential fatty acids differs from species to species. We hypothesized that the DHA content of a newly spawned eggs and its consumption through embryogenesis can be a good indicator of the need to enrich the prey with DHA. In order to assess this hypothesis, we performed a search in the scientific …

Circle Hooks In Commercial, Recreational, And Artisanal Fisheries: Research Status And Needs For Improved Conservation And Management, Joseph E. Serafy, Steven J. Cooke, Guillermo A. Diaz, John E. Graves, Martin Hall, Mahmood S. Shivji, Yonat Swimmer

Marine & Environmental Sciences Faculty Articles

The intent of convening the International Symposium on Circle Hooks in Research, Management, and Conservation was to yield a contemporary, science-based assessment of the management and conservation utility of circle hooks in commercial, recreational, and artisanal fisheries around the globe. The symposium objective was to provide a forum for individuals, organizations, and agencies to share relevant research results and perspectives. Based on the presentations, an examination of the literature, and the collective experience and knowledge of the authors, we provide a brief overview of the current status of circle hook research along with a list of research needs, with a …

Deep-Water Benthic Habitat Characterization And Cable Impact Assessment For The South Florida Ocean Measurement Facility (Sfomf), Charles Messing, Brian K. Walker, John K. Reed

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Assessment Of Natural Resource Condition In And Adjacent To The Dry Tortugas National Park, Christopher F.G. Jeffrey, Sarah D. Hile, Christine M. Addison, Jerald Ault, Carolyn Currin, Don Field, Nicole D. Fogarty, Jiangang Luo, Vanessa Mcdonough, Doug Morrison, Gregory A. Piniak, Varis Ransibrahmanakul, Steve G. Smith, Shay Viehman

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Southeast Florida Coral Reef Evaluation And Monitoring Project 2011 Year 9 Final Report, David S. Gilliam

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Incorporating Circle Hooks Into Atlantic Pelagic Fisheries: Case Studies From The Commercial Tuna/Swordfish Longline And Recreational Billfish Fisheries, John E. Graves, Andrij Horodysky, David W. Kerstetter

Marine & Environmental Sciences Faculty Articles

An emerging body of literature has demonstrated the benefits of the use of circle hooks relative to standard J-hooks in commercial and recreational fisheries. In the pelagic longline fishery for tunas (Thunnus spp.) and swordfish (Xiphias gladius Linnaeus, 1758), the use of circle hooks has resulted in greater catch rates of some target species, lower catch rates of some bycatch species, and a higher percentage of many target and bycatch species alive at the time of haulback (gear retrieval). However, a lack of agreement among results of studies conducted in different fisheries and areas, using different baits and …

First Descriptions Of Endoparasite Fauna Of Elasmobranch And Mesopelagic Teleost Bycatch Fishes From The Western North Atlantic Pelagic Longline Fishery, Mae Taylor, Harold E. Laubach, David W. Kerstetter

Marine & Environmental Sciences Faculty Articles

Natural mortality is a poorly known aspect of fisheries biology, despite its importance in stock assessments and population analysis. Of potential sources of mortality and morbidity in fishes, the effect of internal parasites is perhaps the least studied even though these organisms are known to inhibit nutrient uptake and stimulate an inflammatory response in fish. Parasite taxa of the pelagic elasmobranchs silky and night sharks and pelagic stingray (Carcharhinus falciformis, C. signatus and Pteroplatytrygon violacea), and the mesopelagic teleosts sailfin lancetfish, oilfish, snake mackerel, escolar and Atlantic pomfret (Alepisaurus ferox, Ruvettus pretiosus, Gempylus serpens …

Catch Rates With Variable Strength Circle Hooks In The Hawaii-Based Tuna Longline Fishery, Keith A. Bigelow, David W. Kerstetter, Matthew G. Dancho, Jamie A. Marchetti

Marine & Environmental Sciences Faculty Articles

The Hawaii-based deep-set longline fleet targets bigeye tuna [Thunnus obesus (Lowe, 1839)] and infrequently takes false killer whales [FKW , Pseudorca crassidens (Owen, 1846)] as bycatch. From 2004 to 2008 with 20%–26% observer coverage, nine mortalities of and serious injuries to FKW were documented in the deep-set fishery in the Hawaii EE Z, yielding a mean take estimate of 7.3 animals yr⁻¹. Weak hook technology can utilize the size disparity between target and other species to promote the release of larger non-target species. Four vessels tested the catch efficacy and size selectivity of 15/0 “strong” circle hooks …

Life Cycle Boundaries And Greenhouse Gas Emissions From Beef Cattle, Quentin M. Dudley

Department of Biological Systems Engineering: Dissertations and Theses

Beef cattle are estimated to directly contribute 26% of U.S. agricultural greenhouse gas (GHG) emissions, and future climate change policy may target reducing these emissions. Life cycle assessment (LCA) of GHG emissions from U.S. feedlot beef cattle was conducted to compare methods of the U.S. Environmental Protection Agency (EPA) with a more complete evaluation of emissions. The inclusion of emissions from crop production for feed, associated land use change, and other minor factors nearly doubled GHG emissions associated with beef feedlots from the EPA Annual Inventory estimate of 1611 kgCO₂e hd^-1 yr^-1 to 3182 ± 167 …

Climate's Role In Polar Bear Past [Letters], Kurt E. Galbreath, Joseph A. Cook, Eric P. Hoberg

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Striking temporal concordance between the new date for divergence of polar bears and persistent freezing of the Arctic Ocean suggests that this may be one of relatively few instances in which a specific paleoclimatological episode can be convincingly linked to a specific evolutionary event, and it provides vivid demonstration of climatic forcing as a determinant of diversification in biological systems.

Agenda: A Low-Carbon Energy Blueprint For The American West, University Of Colorado Boulder. Natural Resources Law Center, University Of Colorado Boulder. Renewable And Sustainable Energy Institute, Western Resource Advocates, Rocky Mountain Research Station (Fort Collins, Colo.)

A Low-Carbon Energy Blueprint for the American West (Martz Summer Conference, June 6-8)

The future of the planet may depend upon our ability to increase energy supplies even as we reduce carbon emissions. This conference will address how a low-carbon energy program might evolve with a particular focus on the American West. It will focus on the future of energy in the West--on a “managed transition” to a different energy mix, on the need to nest this effort in a framework that acknowledges interconnections, and on identifying the most salient opportunities to consider the legal, political, financial, and technical challenges.