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Full-Text Articles in Life Sciences

Vignette 12: The Blob, Nicholas Bond May 2021

Vignette 12: The Blob, Nicholas Bond

Institute Publications

A marine heat wave of unprecedented severity, areal extent and duration occurred in the Northeast Pacific Ocean during 2014-2016. This event, known as the “Blob,” had a wide variety of far- ranging effects on physical, chemical, and biological ocean properties. Because the Blob was such a massive perturbation, it represents an attractively large signal for inquiry in the Salish Sea. It represents a dress rehearsal for typical conditions in future decades due to global climate change.


Vignette 02: Lower Trophic Levels In The Salish Sea, Ian Perry May 2021

Vignette 02: Lower Trophic Levels In The Salish Sea, Ian Perry

Institute Publications

Plankton form the base of the pelagic marine food web in the Salish Sea, and are eaten by fishes, marine mammals, and seabirds. Plankton include microscopic plants (phytoplankton) and very small animals (zooplankton). This vignette presents an overview of monitoring observations of phytoplankton and zooplankton distribution and biomass in the Strait of Georgia. Climate change may lead to unusual and unexpected patterns of phytoplankton and zooplankton in the future.


Vignette 13: The Salish Sea Model, Tarang Khangaonkar P.E. May 2021

Vignette 13: The Salish Sea Model, Tarang Khangaonkar P.E.

Institute Publications

Given numerous concerns related to the health of the ecosystem and the possibility of anthropogenic impacts—from population growth to climate impacts, such as sea level rise—scientists, engineers, and planners seek an improved basic understanding of the biophysical behavior of the Salish Sea. The Salish Sea Model (SSM) development was motivated by this urgent need for a comprehensive predictive model that could diagnose water quality issues and concerns and serve as a planning tool in support of Puget Sound restoration efforts. The SSM was developed by the Pacific Northwest National Laboratory in collaboration with the Washington State Department of Ecology (Ecology) …


Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski May 2021

Section 4: Climate Change: A Global Problem With Local Impacts, Kathryn L. Sobocinski

Institute Publications

Section 4 shifts from the local impacts of urbanization to the locally realized impacts of global climate change, including ocean acidification and sea level rise, followed by evidence of climate change in the ecosystem, ranging from phytoplankton and kelp, to wetlands, salmon, and marine birds.


Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes May 2021

Section 5: Cumulative Ecosystem Effects, Kathryn L. Sobocinski, Jennifer Boldt, Todd Sandell, Jaclyn Cleary, Michael Schmidt, Isobel Pearsall, Iris Kemp, Brian Riddell, Lynda V. Mapes

Institute Publications

Section 5 introduces cumulative effects and brings in brief case discussions focused on herring, salmon, and orcas. Understanding the layers of stressors the ecosystem faces is integral to gaining a full picture of declines in ecosystem function.


From Forests To Fish: Mercury In Mountain Lake Food Webs Influenced By Factors At Multiple Scales, Ariana M. Chiapella, Collin A. Eagles-Smith, Angela Strecker Apr 2021

From Forests To Fish: Mercury In Mountain Lake Food Webs Influenced By Factors At Multiple Scales, Ariana M. Chiapella, Collin A. Eagles-Smith, Angela Strecker

Environmental Sciences Faculty and Staff Publications

Mountain lakes, while seemingly pristine, have been subjected to historical fish stocking practices and exposure to atmospherically deposited contaminants like mercury. Mercury bioaccumulation in these ecosystems varies widely due to strong environmental gradients, and there are complex, hierarchical factors that affect mercury transport and loading, methylmercury production, and food web biomagnification. We sought to assess how representative variables associated with watershed, lake, and food web-scale processes—specifically, catchment tree cover, lake benthic primary production, and fish diet, respectively—are associated with mercury concentrations in mountain lake fish. Mean fish mercury concentrations varied threefold between lakes, with nearshore tree cover and fish diet …


Fatty Acid Stable Isotopes Add Clarity, But Also Complexity, To Tracing Energy Pathways In Aquatic Food Webs, Ariana M. Chiapella, Martin J. Kainz, Angela Strecker Feb 2021

Fatty Acid Stable Isotopes Add Clarity, But Also Complexity, To Tracing Energy Pathways In Aquatic Food Webs, Ariana M. Chiapella, Martin J. Kainz, Angela Strecker

Environmental Sciences Faculty and Staff Publications

Tracing the flow of dietary energy sources, especially in systems with a high degree of omnivory, is an ongoing challenge in ecology. In aquatic systems, one of the persistent challenges is in differentiating between autochthonous and allochthonous energy sources to top consumers. Bulk carbon stable isotope values of aquatic and terrestrial prey often overlap, making it difficult to delineate dietary energy pathways in food webs with high allochthonous prey subsidies, such as in many northern temperate waterbodies. We conducted a feeding experiment to explore how fatty acid stable isotopes may overcome the challenge of partitioning autochthonous and allochthonous energy pathways …


Nutrient And Phytoplankton Dynamics On The Inner Shelf Of The Eastern Bering Sea, Calvin W. Mordy, Allan H. (Allan Houston) Devol, Lisa B. Eisner, Nancy Kachel, Carol A. Ladd, Michael W. Lomas, Peter Proctor, Raymond Nicholas Sambrotto, David Shull, Phyllis Jean Stabeno, Eric Wisegarver Mar 2017

Nutrient And Phytoplankton Dynamics On The Inner Shelf Of The Eastern Bering Sea, Calvin W. Mordy, Allan H. (Allan Houston) Devol, Lisa B. Eisner, Nancy Kachel, Carol A. Ladd, Michael W. Lomas, Peter Proctor, Raymond Nicholas Sambrotto, David Shull, Phyllis Jean Stabeno, Eric Wisegarver

Environmental Sciences Faculty and Staff Publications

In the Bering Sea, the nitrogen cycle near Nunivak Island is complicated due to limited nutrient replenishment across this broad shelf, and substantial nitrogen loss through sedimentary processes. While diffusion at the inner front may periodically support new production, the inner shelf in this region is generally described as a regenerative system. This study combines hydrographic surveys with measurements of nitrogen assimilation and benthic fluxes to examine nitrogen cycling on the inner shelf, and connectivity between the middle and inner shelves of the southern and central Bering Sea. Results establish the inner shelf as primarily a regenerative system even in …


Ultra-Diffuse Hydrothermal Venting Supports Fe-Oxidizing Bacteria And Massive Umber Deposition At 5000 M Off Hawaii, Katrina J. Edwards, B. T. Glazer, Olivier J. Rouxel, Wolfgang Bach, D. Emerson, Russ E. Davis, Brandy M. Toner, C. S. Chan, B. M. Tebo, Hubert Staudigel, Craig L. Moyer Jan 2011

Ultra-Diffuse Hydrothermal Venting Supports Fe-Oxidizing Bacteria And Massive Umber Deposition At 5000 M Off Hawaii, Katrina J. Edwards, B. T. Glazer, Olivier J. Rouxel, Wolfgang Bach, D. Emerson, Russ E. Davis, Brandy M. Toner, C. S. Chan, B. M. Tebo, Hubert Staudigel, Craig L. Moyer

Biology Faculty and Staff Publications

A novel hydrothermal field has been discovered at the base of Lōihi Seamount, Hawaii, at 5000 mbsl. Geochemical analyses demonstrate that ‘FeMO Deep’, while only 0.2 °C above ambient seawater temperature, derives from a distal, ultra-diffuse hydrothermal source. FeMO Deep is expressed as regional seafloor seepage of gelatinous iron- and silica-rich deposits, pooling between and over basalt pillows, in places over a meter thick. The system is capped by mm to cm thick hydrothermally derived iron-oxyhydroxide- and manganese-oxide-layered crusts. We use molecular analyses (16S rDNA-based) of extant communities combined with fluorescent in situ hybridizations to demonstrate that FeMO Deep deposits …