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Full-Text Articles in Life Sciences

The State Of Knowledge Of Cca Diversity In The Caribbean Coral Reefs, Danielle Macias, Alain Duran, Fabio Nauer May 2024

The State Of Knowledge Of Cca Diversity In The Caribbean Coral Reefs, Danielle Macias, Alain Duran, Fabio Nauer

FIU Undergraduate Research Journal

Crustose coralline algae (CCA) are a diverse and ecologically important species found in most of the world’s oceans. The current lack of taxonomic knowledge and relative abundance compromises our ability to predict species diversity numbers and, thus, their ecological roles and impacts on coral reefs. To gather a better understanding of the state of knowledge of crustose coralline algae taxonomy in the Caribbean, 107 different research papers, and other primary and secondary literature were studied; any source with taxonomical information, species identification, or genetic markers for identification was recorded. All Genebank codes were collected and sorted by supposed species marker …


Changes In Reef Tourism’S Adaptive Capacity After Severe Climate Disturbances, Henry Bartelet, Michele Barnes, Lalu Bakti, Graeme S. Cumming Apr 2024

Changes In Reef Tourism’S Adaptive Capacity After Severe Climate Disturbances, Henry Bartelet, Michele Barnes, Lalu Bakti, Graeme S. Cumming

Quantitative Methods and Information Technology Faculty Publications

Knowledge about adaptive capacity and its determinants has increased significantly over the last decade. However, most research on adaptive capacity has been static, not considering how adaptive capacity might change over time, particularly after severe disturbances. We studied the adaptive capacity dynamics of Asian-Pacific reef tourism operators affected by coral bleaching and tropical cyclones compared with a control group with non-affected operators. We found that impacts from tropical cyclones were associated with frequent changes in adaptive capacity. Notably, we found a reduction in tangible attributes (assets and flexibility) of adaptive capacity, whereas intangible attributes (agency and social organization) increased. Our …


Levels Of Autotrophy And Heterotrophy In Mesophotic Corals Near The End Photic Zone, Amy Carmignani, Veronica Z. Radice, Kathryn M. Mcmahon, Alex I. Holman, Karen Miller, Kliti Grice, Zoe Richards Jan 2023

Levels Of Autotrophy And Heterotrophy In Mesophotic Corals Near The End Photic Zone, Amy Carmignani, Veronica Z. Radice, Kathryn M. Mcmahon, Alex I. Holman, Karen Miller, Kliti Grice, Zoe Richards

Biological Sciences Faculty Publications

Mesophotic corals live at ~30-150 m depth and can sustain metabolic processes under light-limited conditions by enhancing autotrophy through specialized photoadaptations or increasing heterotrophic nutrient acquisition. These acclimatory processes are often species-specific, however mesophotic ecosystems are largely unexplored and acclimation limits for most species are unknown. This study examined mesophotic coral ecosystems using a remotely operated vehicle (Ashmore Reef, Western Australia at 40–75m depth) to investigate the trophic ecology of five species of scleractinian coral (from genera Leptoseris, Pachyseris, and Craterastrea) using stable isotope analyses (δ13C and δ15N) of host and symbiont tissues …


Caviar Of The Pacific: Palolo Fishing Today And Its Association With Coral Reef Health, Emma Letti Lee Oct 2022

Caviar Of The Pacific: Palolo Fishing Today And Its Association With Coral Reef Health, Emma Letti Lee

Independent Study Project (ISP) Collection

Palolo is a traditional delicacy of Samoa. It is the reproductive part of a marine worm that is released twice a year, October and November in Samoa, making palolo season a culturally significant time. Coral reefs, the palolo worm’s habitat, is under a plethora of environmental threats, which is an extremely prevalent concern for Pacific Islanders. Hundreds of palolo harvesters walking on corals twice a year adds extra pressure on coral reefs. Despite these vulnerabilities, prices of palolo are soaring year by year, while there is little to no research about the palolo worm and documentation of current harvesting practices …


Further Flattening Of A Degraded, Turbid Reef System Following A Severe Coral Bleaching Event, Andrew G. Bauman, Fraser A. Januchowski-Hartley, Aaron Teo, Peter A. Todd Jul 2022

Further Flattening Of A Degraded, Turbid Reef System Following A Severe Coral Bleaching Event, Andrew G. Bauman, Fraser A. Januchowski-Hartley, Aaron Teo, Peter A. Todd

Marine & Environmental Sciences Faculty Articles

Increasing incidence of severe coral bleaching events caused by climate change is contributing to extensive coral losses, shifts in species composition and widespread declines in the physical structure of coral reef ecosystems. With these ongoing changes to coral communities and the concomitant flattening of reef structural complexity, understanding the links between coral composition and structural complexity in maintaining ecosystem functions and processes is of critical importance. Here, we document the impacts of the 2016 global-scale coral bleaching event on seven coral reefs in Singapore; a heavily degraded, turbid reef system. Using a combination of field-based surveys, we examined changes in …


Comparison Of Recent Survey Techniques For Estimating Benthic Cover On Caribbean Mesophotic Reefs, Joseph R. Pawlik, Roy A. Armstrong, Stephanie Farrington, John Reed, Sara Rivero-Calle, Hanumant Singh, Brian K. Walker, Jason White Mar 2022

Comparison Of Recent Survey Techniques For Estimating Benthic Cover On Caribbean Mesophotic Reefs, Joseph R. Pawlik, Roy A. Armstrong, Stephanie Farrington, John Reed, Sara Rivero-Calle, Hanumant Singh, Brian K. Walker, Jason White

Marine & Environmental Sciences Faculty Articles

Highly divergent estimates of benthic cover of sponges have been reported for Caribbean mesophotic reefs (90-100 m) based on quadrat point-intercept data collection using 2 methods: visual surveys conducted in situ by technical divers, and analyses of photographs taken by unmanned underwater vehicles (UUVs). The second method has been criticized for potential errors from image distortion caused by variable camera angle relative to the substratum, but without a broader comparison of both methods. We find that studies that have used the UUV-based method are advantageous for a number of reasons, most importantly: (1) access to the full mesophotic zone, (2) …


Unified Methods In Collecting, Preserving, And Archiving Coral Bleaching And Restoration Specimens To Increase Sample Utility And Interdisciplinary Collaboration, Rebecca Vega Thurber, Emily R. Schmeltzer, Andréa G. Grottoli, Robert Van Woesik, Robert J. Toonen, Mark Warner, Kerri L. Dobson, Rowan H. Mclachlan, Katie Barott, Daniel J. Barshis, Justin Baumann, Leila Chapron, David J. Combosch, Adrienne M.S. Correa, Thomas M. Decarlo, Mary Hagedorn, Laetitia Hédouin, Kenneth Hoadley, Thomas Felis, Christine Ferrier-Pagès, Carly Kenkel, Ilsa B. Kuffner, Jennifer Matthews, Mónica Medina, Christopher Meyer, Corinna Oster, James Price, Hollie M. Putnam, Yvonne Sawall Jan 2022

Unified Methods In Collecting, Preserving, And Archiving Coral Bleaching And Restoration Specimens To Increase Sample Utility And Interdisciplinary Collaboration, Rebecca Vega Thurber, Emily R. Schmeltzer, Andréa G. Grottoli, Robert Van Woesik, Robert J. Toonen, Mark Warner, Kerri L. Dobson, Rowan H. Mclachlan, Katie Barott, Daniel J. Barshis, Justin Baumann, Leila Chapron, David J. Combosch, Adrienne M.S. Correa, Thomas M. Decarlo, Mary Hagedorn, Laetitia Hédouin, Kenneth Hoadley, Thomas Felis, Christine Ferrier-Pagès, Carly Kenkel, Ilsa B. Kuffner, Jennifer Matthews, Mónica Medina, Christopher Meyer, Corinna Oster, James Price, Hollie M. Putnam, Yvonne Sawall

Biological Sciences Faculty Publications

Coral reefs are declining worldwide primarily because of bleaching and subsequent mortality resulting from thermal stress. Currently, extensive efforts to engage in more holistic research and restoration endeavors have considerably expanded the techniques applied to examine coral samples. Despite such advances, coral bleaching and restoration studies are often conducted within a specific disciplinary focus, where specimens are collected, preserved, and archived in ways that are not always conducive to further downstream analyses by specialists in other disciplines. This approach may prevent the full utilization of unexpended specimens, leading to siloed research, duplicative efforts, unnecessary loss of additional corals to research …


Assessment Of Temperature Optimum Signatures Of Corals At Both Latitudinal Extremes Of The Red Sea, Guilhem Banc-Prandi, Nicolas R. Evensen, Daniel J. Barshis, Gabriela Perna, Youssouf Moussa Omar, Maoz Fine Jan 2022

Assessment Of Temperature Optimum Signatures Of Corals At Both Latitudinal Extremes Of The Red Sea, Guilhem Banc-Prandi, Nicolas R. Evensen, Daniel J. Barshis, Gabriela Perna, Youssouf Moussa Omar, Maoz Fine

Biological Sciences Faculty Publications

Rising ocean temperatures are pushing reef-building corals beyond their temperature optima (Topt), resulting in reduced physiological performances and increased risk of bleaching. Identifying refugia with thermally resistant corals and understanding their thermal adaptation strategy is therefore urgent to guide conservation actions. The Gulf of Aqaba (GoA, northern Red Sea) is considered a climate refuge, hosting corals that may originate from populations selected for thermal resistance in the warmer waters of the Gulf of Tadjoura (GoT, entrance to the Red Sea and 2000 km south of the GoA). To better understand the thermal adaptation strategy of GoA corals, …


Element Contamination In Port Everglades – Preparing For Ecological Impacts, Laura White Dec 2021

Element Contamination In Port Everglades – Preparing For Ecological Impacts, Laura White

All HCAS Student Capstones, Theses, and Dissertations

Port dredging is of economic importance worldwide but its impacts to the marine environment through the remobilization of elemental contaminants are not well understood. A massive deepening and widening of Port Everglades, Florida, will begin in 2023. Contaminated sediment disturbed during the dredging process could be released and prove to be harmful to three coral reef tracks located beginning 1.5 miles away from the port. This study focused on identifying and quantifying 14 different trace elements: arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), copper (Cu), mercury (Hg), lead (Pb), manganese (Mn), molybdenum (Mo), nickel (Ni), selenium (Se), tin (Sn), …


Variation In Coral Thermotolerance Across A Pollution Gradient Erodes As Coral Symbionts Shift To More Heat-Tolerant Genera, Melissa S. Naugle, Thomas A. Oliver, Daniel J. Barshis, Ruth D. Gates, Cheryl A. Logan Jan 2021

Variation In Coral Thermotolerance Across A Pollution Gradient Erodes As Coral Symbionts Shift To More Heat-Tolerant Genera, Melissa S. Naugle, Thomas A. Oliver, Daniel J. Barshis, Ruth D. Gates, Cheryl A. Logan

Biological Sciences Faculty Publications

Phenotypic plasticity is one mechanism whereby species may cope with stressful environmental changes associated with climate change. Reef building corals present a good model for studying phenotypic plasticity because they have experienced rapid climate-driven declines in recent decades (within a single generation of many corals), often with differential survival among individuals during heat stress. Underlying differences in thermotolerance may be driven by differences in baseline levels of environmental stress, including pollution stress. To examine this possibility, acute heat stress experiments were conducted on Acropora hyacinthus from 10 sites around Tutuila, American Samoa with differing nutrient pollution impact. A threshold-based heat …


Artificial Reefs: A History, A Science, A Technology, Mairead D. Farrell Jan 2021

Artificial Reefs: A History, A Science, A Technology, Mairead D. Farrell

Honors Theses

Over the past 60 years, artificial reefs have expanded beyond the definition of a technology, and in turn have developed into a unique branch of marine science. To better emphasize this growth and separation, a brief history of artificial reef development and usage in chapter two shows some of the key shifts over time in this technology’s purpose and the materials used to achieve that goal. Likewise, to indicate the scientific development of artificial reefs as a branch of marine science, their usage for discovery and research is recorded in chapter three, along with the exponential increase in published scientific …


Survivorship And Growth In Staghorn Coral (Acropora Cervicornis) Outplanting Projects In The Florida Keys National Marine Sanctuary, Matt Ware, Eliza N. Garfield, Ken Nedimyer, Jessica Levy, Les Kaufman, William F. Precht, R. Scott Winters, Steven Miller May 2020

Survivorship And Growth In Staghorn Coral (Acropora Cervicornis) Outplanting Projects In The Florida Keys National Marine Sanctuary, Matt Ware, Eliza N. Garfield, Ken Nedimyer, Jessica Levy, Les Kaufman, William F. Precht, R. Scott Winters, Steven Miller

Marine & Environmental Sciences Faculty Articles

Significant population declines in Acropora cervicornis and A. palmata began in the 1970s and now exceed over 90%. The losses were caused by a combination of coral disease and bleaching, with possible contributions from other stressors, including pollution and predation. Reproduction in the wild by fragment regeneration and sexual recruitment is inadequate to offset population declines. Starting in 2007, the Coral Restoration Foundation™ evaluated the feasibility of outplanting A. cervicornis colonies to reefs in the Florida Keys to restore populations at sites where the species was previously abundant. Reported here are the results of 20 coral outplanting projects …


The Microscopic Threat With A Macroscopic Impact: Microplastics Along The Southeast Florida Reef Tract, Emma Wightman May 2020

The Microscopic Threat With A Macroscopic Impact: Microplastics Along The Southeast Florida Reef Tract, Emma Wightman

HCNSO Student Theses and Dissertations

Microplastics have been found in large quantities in marine water samples and biota around the world. These microplastics, when present in the marine environment, decrease water quality and negatively impact marine life. This research quantified and classified marine plastic pollution along the Southeast Florida Reef Tract (SEFRT), in order to understand how this plastic is entering the ocean and the scope of the microplastic contamination in the northern SEFRT. Surface and bottom water samples were collected at 7 sites along the SEFRT for 6 months, filtered, and microscopically analyzed for microplastic content and composition using Fourier-transform infrared spectrophotometry (FTIR). Classification …


A Revised Holocene Coral Sea-Level Database From The Florida Reef Tract, Usa, Anastasios Stathakopoulos, Bernhard Riegl, Lauren T. Toth Jan 2020

A Revised Holocene Coral Sea-Level Database From The Florida Reef Tract, Usa, Anastasios Stathakopoulos, Bernhard Riegl, Lauren T. Toth

Marine & Environmental Sciences Faculty Articles

The coral reefs and mangrove habitats of the south Florida region have long been used in sea-level studies for the western Atlantic because of their broad geographic extent and composition of sea-level tracking biota. The data from this region have been used to support several very different Holocene sea-level reconstructions (SLRs) over the years. However, many of these SLRs did not incorporate all available coral-based data, in part because detailed characterizations necessary for inclusion into sea-level databases were lacking. Here, we present an updated database comprised of 303 coral samples from published sources that we extensively characterized for the first …


Spatial And Temporal Trends Of Southeastern Florida's Octocoral Comunity, Alexandra Hiley Dec 2019

Spatial And Temporal Trends Of Southeastern Florida's Octocoral Comunity, Alexandra Hiley

HCNSO Student Theses and Dissertations

In the Caribbean, local and global stressors have driven significant declines in scleractinian coral cover up to 80% in only three decades. Following these declines, phase shifts in benthic community composition have been reported. Shifts towards macroalgal dominance has been the most widely observed case, however, shifts towards octocoral and sponge dominance have also been reported. In Florida, USA, the Florida Reef Tract is an extensive barrier reef system that contains diverse assemblages of corals, sponges, fish, and other taxa. The Southeast Florida Reef Tract (SEFRT) within the Southeast Florida Coral Reef Conservation Area is the northern portion of this …


Fear Effects Associated With Predator Presence And Habitat Structure Interact To Alter Herbivory On Coral Reefs, Andrew G. Bauman, Jovena C. L. Seah, Fraser A. Januchowski-Hartley, Andrew S. Hoey, Jenny Fong, Peter A. Todd Oct 2019

Fear Effects Associated With Predator Presence And Habitat Structure Interact To Alter Herbivory On Coral Reefs, Andrew G. Bauman, Jovena C. L. Seah, Fraser A. Januchowski-Hartley, Andrew S. Hoey, Jenny Fong, Peter A. Todd

Marine & Environmental Sciences Faculty Articles

Non-consumptive fear effects are an important determinant of foraging decisions by consumers across a range of ecosystems. However, how fear effects associated with the presence of predators interact with those associated with habitat structure remain unclear. Here, we used predator fish models (Plectropomus leopardus) and experimental patches of the macroalga Sargassum ilicifolium of varying densities to investigate how predator- and habitat-associated fear effects influence herbivory on coral reefs. We found the removal of macroalgal biomass (i.e. herbivory) was shaped by the interaction between predator- and habitat-associated fear effects. Rates of macroalgal removal declined with increasing macroalgal density, likely …


Taking The Metabolic Pulse Of The World's Coral Reefs, Tyler Cyronak, Andreas J. Andersson, Chris Langdon, Rebecca Albright, Nicholas R. Bates, Ken Caldeira, Renee Carlton, Jorge E. Corredor, Rob B. Dunbar, Ian Enochs, Jonathan Erez, Bradley D. Eyre, Jean-Pierre Gattuso, Dwight Gledhill, Hajime Kayanne, David I. Kline, David A. Koweek, Coulson Lantz, Boaz Lazar, Derek Manzello, Ashly Mcmahon, Melissa Melendez, Heather N. Page, Isaac R. Santos, Kai G. Schulz, Emily Shaw, Jacob Silverman, Atsushi Suzuki, Lida Teneva, Atsushi Watanabe, Shoji Yamamoto Sep 2019

Taking The Metabolic Pulse Of The World's Coral Reefs, Tyler Cyronak, Andreas J. Andersson, Chris Langdon, Rebecca Albright, Nicholas R. Bates, Ken Caldeira, Renee Carlton, Jorge E. Corredor, Rob B. Dunbar, Ian Enochs, Jonathan Erez, Bradley D. Eyre, Jean-Pierre Gattuso, Dwight Gledhill, Hajime Kayanne, David I. Kline, David A. Koweek, Coulson Lantz, Boaz Lazar, Derek Manzello, Ashly Mcmahon, Melissa Melendez, Heather N. Page, Isaac R. Santos, Kai G. Schulz, Emily Shaw, Jacob Silverman, Atsushi Suzuki, Lida Teneva, Atsushi Watanabe, Shoji Yamamoto

Tyler Cyronak

Worldwide, coral reef ecosystems are experiencing increasing pressure from a variety of anthropogenic perturbations including ocean warming and acidification, increased sedimentation, eutrophication, and overfishing, which could shift reefs to a condition of net calcium carbonate (CaCO3) dissolution and erosion. Herein, we determine the net calcification potential and the relative balance of net organic carbon metabolism (net community production; NCP) and net inorganic carbon metabolism (net community calcification; NCC) within 23 coral reef locations across the globe. In light of these results, we consider the suitability of using these two metrics developed from total alkalinity (TA) and dissolved inorganic carbon (DIC) …


Enhanced Acidification Of Global Coral Reefs Driven By Regional Biogeochemical Feedbacks, Tyler Cyronak, Kai G. Schulz, Isaac R. Santos, Bradley D. Eyre Sep 2019

Enhanced Acidification Of Global Coral Reefs Driven By Regional Biogeochemical Feedbacks, Tyler Cyronak, Kai G. Schulz, Isaac R. Santos, Bradley D. Eyre

Tyler Cyronak

Physical uptake of anthropogenic CO2 is the dominant driver of ocean acidification (OA) in the open ocean. Due to expected decreases in calcification and increased dissolution of CaCO3 framework, coral reefs are thought to be highly susceptible to OA. However, biogeochemical processes can influence the pCO2 and pH of coastal ecosystems on diel and seasonal time scales, potentially modifying the long‐term effects of increasing atmospheric CO2. By compiling data from the literature and removing the effects of short‐term variability, we show that the average pCO2 of coral reefs throughout the globe has increased ~3.5‐fold …


Modulation Of Light-Enhancement To Symbiotic Algae By Light-Scattering In Corals And Evolutionary Trends In Bleaching, Luisa A. Marcelino, Mark W. Westneat, Valentina P. Stoyneva, Jillian Henss, Jeremy Rogers, Andrew J. Radosevich, Vladimir Turzhitsky, Margaret Siple, Andrew Fang, Timothy D. Swain, Jennifer Fung, Vadim Backman Jul 2019

Modulation Of Light-Enhancement To Symbiotic Algae By Light-Scattering In Corals And Evolutionary Trends In Bleaching, Luisa A. Marcelino, Mark W. Westneat, Valentina P. Stoyneva, Jillian Henss, Jeremy Rogers, Andrew J. Radosevich, Vladimir Turzhitsky, Margaret Siple, Andrew Fang, Timothy D. Swain, Jennifer Fung, Vadim Backman

Timothy Swain

Calcium carbonate skeletons of scleractinian corals amplify light availability to their algal symbionts by diffuse scattering, optimizing photosynthetic energy acquisition. However, the mechanism of scattering and its role in coral evolution and dissolution of algal symbioses during “bleaching” events are largely unknown. Here we show that differences in skeletal fractal architecture at nano/micro-lengthscales within 96 coral taxa result in an 8-fold variation in light-scattering and considerably alter the algal light environment. We identified a continuum of properties that fall between two extremes: (1) corals with low skeletal fractality that are efficient at transporting and redistributing light throughout the colony with …


Population Dynamics And Genotypic Richness Of The Threatened Acropora Spp. And Their Hybrid In The U.S. Virgin Islands, Hannah F. Nylander-Asplin Nov 2018

Population Dynamics And Genotypic Richness Of The Threatened Acropora Spp. And Their Hybrid In The U.S. Virgin Islands, Hannah F. Nylander-Asplin

HCNSO Student Theses and Dissertations

Since the 1980’s, there has been an unprecedented decline in the reef-building Caribbean corals, Acropora cervicornis and A. palmata, which has led to their listing as “threatened” under the U.S Endangered Species Act. Despite this protective status, these Acropora species continue to experience declines primarily attributed to disease, global climate change, and storm damage. Recent evidence suggests the hybrid of these threatened species (A. prolifera) is found at abundances similar to or higher than the parental species at many sites throughout the Caribbean. However, there is still much that is unknown as to how and why hybrids may …


Spatiotemporal Change In The Benthic Community Of Southeast Florida, Nicholas P. Jones Jul 2018

Spatiotemporal Change In The Benthic Community Of Southeast Florida, Nicholas P. Jones

HCNSO Student Theses and Dissertations

High-latitude reefs have been postulated as refugia, centers for resilience or the first areas to undergo re-organization under climate change. The Southeast Florida Reef Tract (SEFRT) is a high-latitude reef system (>25 °N) running parallel to the highly urbanized coastline of southeast Florida. With a benthic community comprised of a mixture of coral reef associated assemblages, the SEFRT is towards the northern limit of stony coral cover due to temperature constraints. This study analyzed spatial variations in benthic cover, spatiotemporal changes in the benthic community and the impact of spatial and temporal fluctuations in temperature on benthic cover on …


Taking The Metabolic Pulse Of The World's Coral Reefs, Tyler Cyronak, Andreas J. Andersson, Chris Langdon, Rebecca Albright, Nicholas R. Bates, Ken Caldeira, Renee Carlton, Jorge E. Corredor, Rob B. Dunbar, Ian Enochs, Jonathan Erez, Bradley D. Eyre, Jean-Pierre Gattuso, Dwight Gledhill, Hajime Kayanne, David I. Kline, David A. Koweek, Coulson Lantz, Boaz Lazar, Derek Manzello, Ashly Mcmahon, Melissa Melendez, Heather N. Page, Isaac R. Santos, Kai G. Schulz, Emily Shaw, Jacob Silverman, Atsushi Suzuki, Lida Teneva, Atsushi Watanabe, Shoji Yamamoto Jan 2018

Taking The Metabolic Pulse Of The World's Coral Reefs, Tyler Cyronak, Andreas J. Andersson, Chris Langdon, Rebecca Albright, Nicholas R. Bates, Ken Caldeira, Renee Carlton, Jorge E. Corredor, Rob B. Dunbar, Ian Enochs, Jonathan Erez, Bradley D. Eyre, Jean-Pierre Gattuso, Dwight Gledhill, Hajime Kayanne, David I. Kline, David A. Koweek, Coulson Lantz, Boaz Lazar, Derek Manzello, Ashly Mcmahon, Melissa Melendez, Heather N. Page, Isaac R. Santos, Kai G. Schulz, Emily Shaw, Jacob Silverman, Atsushi Suzuki, Lida Teneva, Atsushi Watanabe, Shoji Yamamoto

Marine & Environmental Sciences Faculty Articles

Worldwide, coral reef ecosystems are experiencing increasing pressure from a variety of anthropogenic perturbations including ocean warming and acidification, increased sedimentation, eutrophication, and overfishing, which could shift reefs to a condition of net calcium carbonate (CaCO3) dissolution and erosion. Herein, we determine the net calcification potential and the relative balance of net organic carbon metabolism (net community production; NCP) and net inorganic carbon metabolism (net community calcification; NCC) within 23 coral reef locations across the globe. In light of these results, we consider the suitability of using these two metrics developed from total alkalinity (TA) and dissolved inorganic carbon (DIC) …


Thirty Years Of Research On Crown-Of-Thorns Starfish (1986–2016): Scientific Advances And Emerging Opportunities, Morgan S. Pratchett, Clemon F. Caballes, Jennifer C. Wilmes, Samuel Matthews, Camille Mellin, Hugh P. A. Sweatman, Lauren E. Nadler, Jon Brodie, Cassandra A. Thompson, Jessica Hoey, Arthur R. Bos, Maria Byrne, Vanessa Messmer, Sofia A. V. Fortunato, Carla C. M. Chen, Alexandra C. E. Buck, Russell C. Babcock, Sven Uthicke Sep 2017

Thirty Years Of Research On Crown-Of-Thorns Starfish (1986–2016): Scientific Advances And Emerging Opportunities, Morgan S. Pratchett, Clemon F. Caballes, Jennifer C. Wilmes, Samuel Matthews, Camille Mellin, Hugh P. A. Sweatman, Lauren E. Nadler, Jon Brodie, Cassandra A. Thompson, Jessica Hoey, Arthur R. Bos, Maria Byrne, Vanessa Messmer, Sofia A. V. Fortunato, Carla C. M. Chen, Alexandra C. E. Buck, Russell C. Babcock, Sven Uthicke

Marine & Environmental Sciences Faculty Articles

Research on the coral-eating crown-of-thorns starfish (CoTS) has waxed and waned over the last few decades, mostly in response to population outbreaks at specific locations. This review considers advances in our understanding of the biology and ecology of CoTS based on the resurgence of research interest, which culminated in this current special issue on the Biology, Ecology and Management of Crown-of-Thorns Starfish. More specifically, this review considers progress in addressing 41 specific research questions posed in a seminal review by P. Moran 30 years ago, as well as exploring new directions for CoTS research. Despite the plethora of research on …


Coral Bleaching And The Effect Of Disturbances On The Damselfish Community On Lizard Island, Australia, Alejandra Munoz Jan 2017

Coral Bleaching And The Effect Of Disturbances On The Damselfish Community On Lizard Island, Australia, Alejandra Munoz

Independent Study Project (ISP) Collection

Coral reefs are characterized by their dynamic ecological processes that supports a high diversity through the recruitment of marine species and temporal disturbances that can have positive effects on the system. In the face of global climate change however, coral reefs face intense coral bleaching and increased degradation as they may begin to have less time to recover between bleaching events in the near future. Little is known on the long term effects of coral bleaching and habitat degradation on reef fish communities and much less is known about the mechanisms that bring about changes to reef fish assemblages.

This …


Low Florida Coral Calcification Rates In The Plio-Pleistocene, Thomas C. Brachert, Markus Reuter, Stefan Kruger, James S. Klaus, Kevin P. Helmle, Janice M. Lough Aug 2016

Low Florida Coral Calcification Rates In The Plio-Pleistocene, Thomas C. Brachert, Markus Reuter, Stefan Kruger, James S. Klaus, Kevin P. Helmle, Janice M. Lough

Marine & Environmental Sciences Faculty Articles

In geological outcrops and drill cores from reef frameworks, the skeletons of scleractinian corals are usually leached and more or less completely transformed into sparry calcite because the highly porous skeletons formed of metastable aragonite (CaCO3) undergo rapid diagenetic alteration. Upon alteration, ghost structures of the distinct annual growth bands often allow for reconstructions of annual extension ( =  growth) rates, but information on skeletal density needed for reconstructions of calcification rates is invariably lost. This report presents the bulk density, extension rates and calcification rates of fossil reef corals which underwent minor diagenetic alteration only. The corals derive from …


Genomic Variation Among Populations Of Threatened Coral: Acropora Cervicornis, C. Drury, K. E. Dale, J. M. Panlilio, S. V. Miller, D. Lirman, E. A. Larson, E. Bartels, D. L. Crawford, M. F. Oleksiak Apr 2016

Genomic Variation Among Populations Of Threatened Coral: Acropora Cervicornis, C. Drury, K. E. Dale, J. M. Panlilio, S. V. Miller, D. Lirman, E. A. Larson, E. Bartels, D. L. Crawford, M. F. Oleksiak

Marine & Environmental Sciences Faculty Articles

Background: Acropora cervicornis, a threatened, keystone reef-building coral has undergone severe declines (>90 %) throughout the Caribbean. These declines could reduce genetic variation and thus hamper the species’ ability to adapt. Active restoration strategies are a common conservation approach to mitigate species' declines and require genetic data on surviving populations to efficiently respond to declines while maintaining the genetic diversity needed to adapt to changing conditions. To evaluate active restoration strategies for the staghorn coral, the genetic diversity of A. cervicornis within and among populations was assessed in 77 individuals collected from 68 locations along the Florida Reef …


Sex On The Reef: Observations Of Coral Spawning In Dry Tortugas National Park, Karen L. Neely, Tracy A. Ziegler Jan 2016

Sex On The Reef: Observations Of Coral Spawning In Dry Tortugas National Park, Karen L. Neely, Tracy A. Ziegler

Marine & Environmental Sciences Faculty Articles

In Florida’s remote Dry Tortugas National Park, coral reefs are an important management priority. Reproduction of coral species is difficult to monitor, however, and the reproductive potential of coral colonies at the park has been a matter of concern for several years. Two threatened species, elkhorn coral (Acropora palmata) and pillar coral (Dendrogyra cylindrus), were targeted for observation during their predicted annual spawning event in August 2014. Over a three-night period, both species were observed releasing gametes in near synchrony with observations at other sites in the Florida Keys. That these organisms are capable of being …


Leucothoe Eltoni Sp. N., A New Species Of Commensal Leucothoid Amphipod From Coral Reefs In Raja Ampat, Indonesia (Crustacea, Amphipoda), James Darwin Thomas Aug 2015

Leucothoe Eltoni Sp. N., A New Species Of Commensal Leucothoid Amphipod From Coral Reefs In Raja Ampat, Indonesia (Crustacea, Amphipoda), James Darwin Thomas

Marine & Environmental Sciences Faculty Articles

A new species of leucothoid amphipod, Leucothoe eltoni sp. n., is described from coral reefs in Raja Ampat, Indonesia where it inhabits the branchial chambers of solitary tunicates. With an inflated first gnathopod superficially resembling the genus Paraleucothoe, this new species has a two-articulate maxilla 1 palp characteristic of the genus Leucothoe. While described from coral reef environments in tropical Indonesia and the Philippines, it is an established invasive species in the Hawaiian Islands. The most likely mode of introduction was a US Navy dry dock transported to Pearl Harbor in 1992 from Subic Bay, Philippines.


Understanding Ocean Acidification Impacts On Organismal To Ecological Scales, Andreas J. Andersson, David I. Kline, Peter J. Edmunds, Stephen D. Archer, Nina Bednarsek, Robert C. Carpenter, Meg Chadsey, Philip Goldstein, Andrea G. Grottoli, Thomas P. Hurst, Andrew L. King, Janet E. Kübler, Ilsa B. Kuffner, Katherine R.M. Mackey, Bruce A. Menge, Adina Paytan, Ulf Riebesell, Astrid Schnetzer, Mark E. Warner, Richard C. Zimmerman Jan 2015

Understanding Ocean Acidification Impacts On Organismal To Ecological Scales, Andreas J. Andersson, David I. Kline, Peter J. Edmunds, Stephen D. Archer, Nina Bednarsek, Robert C. Carpenter, Meg Chadsey, Philip Goldstein, Andrea G. Grottoli, Thomas P. Hurst, Andrew L. King, Janet E. Kübler, Ilsa B. Kuffner, Katherine R.M. Mackey, Bruce A. Menge, Adina Paytan, Ulf Riebesell, Astrid Schnetzer, Mark E. Warner, Richard C. Zimmerman

OES Faculty Publications

Ocean acidification (OA) research seeks to understand how marine ecosystems and global elemental cycles will respond to changes in seawater carbonate chemistry in combination with other environmental perturbations such as warming, eutrophication, and deoxygenation. Here, we discuss the effectiveness and limitations of current research approaches used to address this goal. A diverse combination of approaches is essential to decipher the consequences of OA to marine organisms, communities, and ecosystems. Consequently, the benefits and limitations of each approach must be considered carefully. Major research challenges involve experimentally addressing the effects of OA in the context of large natural variability in seawater …


Comment On “Chemically Mediated Behavior Of Recruiting Corals And Fishes: A Tipping Point That May Limit Reef Recovery”, Andrew H. Baird, Vivian R. Cumbo, Joana Figueiredo, Saki Harii, Tom Hata, Joshua S. Madin Nov 2014

Comment On “Chemically Mediated Behavior Of Recruiting Corals And Fishes: A Tipping Point That May Limit Reef Recovery”, Andrew H. Baird, Vivian R. Cumbo, Joana Figueiredo, Saki Harii, Tom Hata, Joshua S. Madin

Marine & Environmental Sciences Faculty Articles

Dixson et al. (2014) report that coral larvae navigate towards chemical cues associated with healthy reefs and avoid cues from degraded reefs. However, the swimming capabilities of coral larvae and well-established patterns of recruitment and reef hydrodynamics indicate that coral larvae will not be able to use these cues to recruit to healthy reefs. Perfuming degraded reefs, as suggested by Dixson et al (2014), will not enhance recovery rather it will distract from the difficult task of reducing fishing effort and improving water quality.