Life Sciences Commons^™

Robinson Point, Belize: An Important Foraging Ground For Endangered Sea Turtles In The Western Caribbean Sea, Linda Searle

HCNSO Student Theses and Dissertations

Anecdotal reports, flipper tag returns, satellite migration paths, and above-water and net surveys have identified an important foraging area for sea turtles in the Robinson Point area, 12 kilometers southwest of Belize City. Visual observations confirmed that sea turtles were actively foraging at Robinson Point. Sixteen 30 minute visual observations from stationary and drifting boats made 132 sea turtle sightings from October 2007 through January 2008, with a maximum of 40 sightings made in one survey. In-water capture methodology tested the traditional turtle net, which captured 14 turtles in 63 sets for a success rate of only 22%. There were …

Development And Application Of A Gis-Based Long Island Sound Eelgrass Habitat Suitability Index Model, Jamie M.P. Vaudrey, Justin Eddings, Christopher Pickerell, Lorne Brousseau, Charles Yarish

Department of Marine Sciences

The primary objectives of the Eelgrass Habitat Suitability Index Model (EHSI Model) are to assist in the evaluation of sites being considered for eelgrass restoration efforts in the Long Island Sound (LIS) area and to identify areas where water quality issues reduce or eliminate the potential for natural eelgrass colonization. To achieve this goal, geospatial processing of data available from the Long Island Sound area was conducted using ArcGIS v10.0 including the 3D Analyst and Spatial Analyst extensions. The result is a series of maps presented in this report and a GIS-based model available for users to interact with the …

The North American Carbon Program Multi-Scale Synthesis And Terrestrial Model Intercomparison Project – Part 1: Overview And Experimental Design, D. N. Huntzinger, C. Schwalm, A, M, Michalak, K. Schaefer, A. W. King, Y. Wei, A. Jacobson, S. Liu, R. B. Cook, W. M. Post, G. Berthier, D Hayes, M. Huang, A. Ito, H. Lei, Chaoqun (Crystal) Lu, J. Mao, C. H. Peng, S. Peng, B. Poulter, D. Ricciuto, X. Shi, Hanqin Tian, W. Wang, N. Zeng, F. Zhao, Q. Zhu

Chaoqun (Crystal) Lu

Terrestrial biosphere models (TBMs) have become an integral tool for extrapolating local observations and understanding of land–atmosphere carbon exchange to larger regions. The North American Carbon Program (NACP) Multi-scale synthesis and Terrestrial Model Intercomparison Project (MsTMIP) is a formal model intercomparison and evaluation effort focused on improving the diagnosis and attribution of carbon exchange at regional and global scales. MsTMIP builds upon current and past synthesis activities, and has a unique framework designed to isolate, interpret, and inform understanding of how model structural differences impact estimates of carbon uptake and release. Here we provide an overview of the MsTMIP effort …

Species Composition And Reproductive Strategies Of Commensal Synalpheus Shrimp (Decapoda:Alpheidae) Occupying The Sponges Spheciospongia Vesparium And Spongia Sp. Of The Florida Reef Tract, Brittnee Nicole Barris

HCNSO Student Theses and Dissertations

Synalpheus shrimp species of the gambarelloides group are the only marine organisms displaying the highest level of social functioning, eusociality. Their social hierarchies are equally complex compared to the reproductive abnormalities that have been recently discovered. For instance, snapping shrimp of the genus Synalpheus were thought to be gonochoric, i.e. developing as independent sexes, until scanning electron microscopy studies revealed intersexed gonopores in several species. This project analyzed both the species composition, and accompanying reproductive structures, of Synalpheus spp. (Caridea: Alpheidae) comprised of densely aggregating communal and pair-living colonies in the Florida Keys, Florida.

Colonies of pair-living and communal Synalpheus …

Educating The Masses: Human Attitudes Affecting Reef Health, Ashley Wiehl

HCNSO Student Theses and Dissertations

About two thirds of the world’s population lives within 60 km of a coastline, however many members of the public do not recognize the importance of the nearby coral reef ecosystems. Although reef degradation is currently occurring at alarming rates, there is hope for the future of coral reef health. It is proven that humans have a large effect on the current health of coral reefs. This thesis aims to determine how marine scientists and educators can best influence the general public to affect behaviors to improve reef health. To do this involves taking analyzing the many effects of human …

Assessing Growth Response To Climate Controls In A Great Basin Artemisia Tridentata Plant Community, Lorenzo F. Apodaca

UNLV Theses, Dissertations, Professional Papers, and Capstones

An assessment of the growth response of key vegetative species to climatic variability is vital to identifying possible local impacts on ecosystems faced with imminent climate change. With current climate projections in Nevada predicting a shift to an even more arid climate with greater year-to-year variability, the imperative exists to identify the effects of specific climatic controls on plant growth and to research methods to assess large-scale vegetative changes, especially in more remote areas where readily available data sets may be lacking. This study utilized annual growth ring indices constructed from big sagebrush (Artemisia tridentatassp.tridentata) stems collected in Spring Valley, …

Cnh: Collaborative Research: Direct And Indirect Coupling Of Fisheries Through Economic, Regulatory, Environmental, And Ecological Linkages, Andrew J. Pershing, Yong Chen, Jeffrey Runge

University of Maine Office of Research Administration: Grant Reports

The productivity and resilience of fisheries are subject to a multitude of dynamic and interrelated influences that arise from complex coupling of fish populations with the natural and human systems of which they are a part. With few exceptions, fisheries currently are managed independently, ignoring important natural and human linkages among them. The biological productivity, sustainability, and consequently human benefits of complex fishery systems may be substantially increased if these linkages are better understood and if this understanding is applied to management. The American lobster (Homarus americanus), Atlantic herring (Clupea harengus) and Northeast multispecies groundfish fisheries in the Gulf of …

Determining The Extent And Characterizing Coral Reef Habitats Of The Northern Latitudes Of The Florida Reef Tract (Martin County), Brian K. Walker, David S. Gilliam

Marine & Environmental Sciences Faculty Articles

Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25–27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping …

Tracking Transmission Of Apicomplexan Symbionts In Diverse Caribbean Corals, Nathan L. Kirk, Raphael Ritson-Williams, Mary Alice Coffroth, Margaret W. Miller, Nicole D. Fogarty, Scott R. Santos

Marine & Environmental Sciences Faculty Articles

Symbionts in each generation are transmitted to new host individuals either vertically (parent to offspring), horizontally (from exogenous sources), or a combination of both. Scleractinian corals make an excellent study system for understanding patterns of symbiont transmission since they harbor diverse symbionts and possess distinct reproductive modes of either internal brooding or external broadcast spawning that generally correlate with vertical or horizontal transmission, respectively. Here, we focused on the under-recognized, but apparently widespread, coral-associated apicomplexans (Protista: Alveolata) to determine if symbiont transmission depends on host reproductive mode. Specifically, a PCR-based assay was utilized towards identifying whether planula larvae and reproductive …

Quantifying Crop Yield, Bioenergy Production And Greenhouse Gas Emissions From Cropland And Marginal Land Using A Model-Data Fusion Approach, Zhangcai Qin

Open Access Dissertations

Bioenergy is becoming increasingly attractive to many countries, but has sparked an intensive debate regarding energy, economy, society and environment. Biofuels provide alternative energy to conventional fossil fuels. However, the environmental impact of producing and using biofuel is a major concern to our society. This study is dedicated to quantifying and evaluating biofuel production and potential climate change mitigation due to potential large-scale bioenergy expansion in the conterminous United States, using model-data fusion approaches.

Biofuel made from conventional (e.g., maize (Zea mays L.)) and cellulosic crops (e.g., switchgrass (Panicum virgatum L.) and Miscanthus (Miscanthus × giganteus)) …

Effects Of Ocean Acidification On The Behavior Of Two Marine Invertebrates: A Study Of Predator-Prey Responses Of The Molluscs Conus Marmoreus And Strombus Luhuanus At Elevated-Co2 Conditions, Jennifer Fields

Independent Study Project (ISP) Collection

Ocean acidification has been affecting the world’s oceans since the introduction of anthropogenic CO2 into the atmosphere during the Industrial Revolution. An increase in CO2 uptake from the atmosphere to the ocean has had a profound impact on not only the water chemistry, but marine organisms as well. Ocean acidification is known to have significant impacts on marine invertebrates in terms of calcification and reproduction; however, effects of increased CO2 on marine invertebrate behavior are vastly unknown. Marine conch gastropods have a modified muscularized foot that allows them to escape quite rapidly when faced with a predator cone shell. Utilizing …

Permeable Coral Reef Sediment Dissolution Driven By Elevated Pco2 And Pore Water Advection, Tyler Cyronak, Isaac R. Santos, Bradley D. Eyre

Marine & Environmental Sciences Faculty Articles

Ocean acidification (OA) is expected to drive the transition of coral reef ecosystems from net calcium carbonate (CaCO₃) precipitating to net dissolving within the next century. Although permeable sediments represent the largest reservoir of CaCO₃ in coral reefs, the dissolution of shallow CaCO₃ sands under future pCO₂ levels has not been measured under natural conditions. In situ, advective chamber incubations under elevated pCO₂ (~800 µatm) shifted the sediments from net precipitating to net dissolving. Pore water advection more than doubled dissolution rates (1.10 g CaCO₃ m⁻² d⁻¹) when compared to …

Incorporating Satellite Derived Cloud Climatologies To Improve High Resolution Interpolation Of Daily Precipitation., Adam M. Wilson, Benoit Parmentier, Brian Mcgill, Rob Guralnick, Walter Jetz

Yale Day of Data

Conservation of biodiversity demands comprehension of evolutionary and ecological patterns and processes that occur over vast spatial and temporal scales. A central goal of ecology is to understand the factors that control the spatial distribution of species and this has become even more important in the face of climate change. However, at global scales there can be enormous uncertainty in environmental data used to model species distributions. Even ‘simple’ metrics such as mean annual precipitation are difficult to estimate in areas with few weather stations and available data sets do not quantify uncertainty in these surfaces. We are developing a …

Migratory Patterns And Habitat Use Of The Sand Tiger Shark (Carcharias Taurus) In The Western North Atlantic Ocean, Shara Marie Teter

HCNSO Student Theses and Dissertations

Large population declines for sand tiger sharks (Carcharias taurus) in parts of its global range are well documented, resulting in a strong need for biologically informed conservation and management measures. Although sand tigers in the western North Atlantic have been listed as a Species of Concern by the US government since 1997, details of their seasonal migratory movements and especially vertical habitat use patterns along the US East Coast are limited. Understanding these movement patterns is vital to reducing fishery-related mortality of these sharks and informing other management efforts aimed at recovery of their stocks in the US Atlantic. …

Technical Appendix: Economic Impact Of Commercial Fisheries On Local County Economies From Catch In California National Marine Sanctuaries 2010, 2011 And 2012, Vernon R. Leeworthy, Desiree Jerome, Kelsey Schueler

Working Papers

This report documents the data and methods of estimation used in estimating the economic impact of commercial fishing catch from all four National Marine Sanctuaries in California on local county economies in terms of harvest revenue received by fishermen and the associated economic impacts, including multiplier impacts, on total output, value added, income and the number of full- and part-time jobs.

This report is part of a series of reports meeting the priorities in the “Office of National Marine Sanctuaries (ONMS) West Coast Region Socioeconomic Plan FY 2013 – FY 2014” and “national program priorities” on establishing the connection between …

Feeling The Heat? Substantial Variation In Temperatures Does Not Affect The Proportion Of Males Born In Australia, Barnaby J. Dixson, John Haywood, Philip J. Lester, Diane K. Ormsby

Human Biology Open Access Pre-Prints

The global proportion of male births has been shown to vary with climate, with a higher proportion of male births documented in colder climates. Here we examined the hypothesis that ambient temperature predicts fluctuations in the proportion of male births in Australia and within seven Australian states using historical annual data spanning 1910-2009. We predicted that within states with tropical ambient temperatures the proportion of male births would decrease when ambient temperatures are higher. Considering the national composite births for the whole of Australia first, the proportion of males born ranged only from 0.510 to 0.517. We observed no relationship …

The General Qapp For Long Island Sound Volunteer Coastal Monitoring (With Adoption Form), Jamie M.P. Vaudrey, Kimberly Gallagher

Department of Marine Sciences

The General QAPP for Long Island Sound Volunteer Coastal Monitoring is designed to streamline the process of writing a QAPP for Monitoring Programs in the Long Island Sound area. This document does not replace guidance on developing a program and is not sufficient as a stand-alone document to guide the initial development and sample design process for a monitoring program.

Evaluation Of Current Community-Based Monitoring Efforts And Recommendations For Developing A Cohesive Network Of Support For Monitoring Long Island Sound Embayments., Jamie M.P. Vaudrey, Jamie Alonzo, Adrienne Esposito, Curt Johnson, Maureen Dolan Murphy, Charles Yarish

Department of Marine Sciences

This project focuses on Long Island Sound embayments and represents an exploration of the potential for coordination among community-based water quality monitoring groups, and coordination between community-based groups and data end users, including scientists and managers. Community-based monitoring groups represent a potential valuable source of water quality information. The development of standardized protocols, training methods and reporting procedures will serve to provide end users with the confidence necessary to utilize the data collected as part of community-based monitoring programs. Both groups of stakeholders stand to benefit from this type of coordination with the ultimate benefit being a healthier, better understood …

Buoy Gear- A Potential For Bycatch Reduction In The Small-Scale Swordfish Fisheries: A Florida Experience And Indian Ocean Perspective., Evgeny V. Romanov, David W. Kerstetter, Travis Allan Moore, Pascal Bach

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

A swordfish buoy gear, an innovative fishing practice developed in USA in early 2000s, provide a possibility of direct swordfish targeting yielding high CPUE of target species and very low bycatch levels. Here we present a summary of US experience and discuss potential application of this gear in the Indian Ocean region in the perspective of small-scale fisheries development and bycatch reduction.

Evidence For 20th Century Climate Warming And Wetland Drying In The North American Prairie Pothole Region, Brett A. Werner, W. Carter Johnson, Glenn R. Guntenspergen

Natural Resource Management Faculty Publications

The Prairie Pothole Region (PPR) of North America is a globally important resource that provides abundant and valuable ecosystem goods and services in the form of biodiversity, groundwater recharge, water purification, flood attenuation, and water and forage for agriculture. Numerous studies have found these wetlands, which number in the millions, to be highly sensitive to climate variability. Here, we compare wetland conditions between two 30-year periods (1946–1975; 1976–2005) using a hindcast simulation approach to determine if recent climate warming in the region has already resulted in changes in wetland condition. Simulations using the WETLANDSCAPE model show that 20th century climate …

A Pre-Zygotic Barrier To Hybridization In Two Con-Generic Species Of Scleractinian Corals, Andrew H. Baird, Vivian R. Cumbo, Joana Figueiredo, Saki Harii

Marine & Environmental Sciences Faculty Articles

Hybridization is often cited as a potential source of evolutionary novelty in the order Scleractinia. While hybrid embryos can be produced in vitro, it has been difficult to identify adult hybrids in the wild. Here, we tested the potential for hybridization between two closely related species in the family Fungiidae. We mixed approximately 5000 eggs of Ctenactis echinata with sperm from C. crassa. No hybrid embryos were produced. This observation adds to a growing body of evidence for pre-zygotic barriers to hybridization in corals and challenges the claim that hybridization is a major source of evolutionary novelty …

Integrated Carbon Budget Models For The Everglades Terrestrial-Coastal-Oceanic Gradient: Current Status And Needs For Inter-Site Comparisons, Tiffany G. Troxler, Evelyn Gaiser, Jordan Barr, Jose D. Fuentes, Rudolf Jaffe, Daniel L. Childers, Ligia Collado-Vides, Victor H. Rivera-Monroy, Edward Castaneda-Moya, William Anderson, Randy Chambers, Meilian Chen, Carlos Coronado-Molina, Stephen E. Davis, Victor Engel, Carl Fitz, James Fourqurean, Tom Frankovich, John Kominoski, Chris Madden, Sparkle L. Malone, Steve F. Oberbauer, Paulo Olivas, Jennifer Richards, Colin Saunders, Jessica L. Schedlbauer, Leonard J. Scinto, Fred Sklar, Tom Smith, Joseph M. Smoak, Gregory Starr, Robert R. Twilley, Kevin Whelan

Biology Faculty Publications

No abstract provided.

Beyond Climate-Smart Agriculture: Toward Safe Operating Spaces For Global Food Systems, Henry Neufeldt, Molly Jahn, Bruce M. Campbell, John R. Beddington, Fabrice Declerck, Alessandro De Pinto, Jay Gulledge, Jonathan Hellin, Mario Herrero, Andy Jarvis, David Lezaks, Holger Meinke, Todd Rosenstock, Mary Scholes, Robert Scholes, Sonja Vermeulen, Eva Wollenberg, Robert Zougmoré

Rubenstein School of Environment and Natural Resources Faculty Publications

Agriculture is considered to be "climate-smart" when it contributes to increasing food security, adaptation and mitigation in a sustainable way. This new concept now dominates current discussions in agricultural development because of its capacity to unite the agendas of the agriculture, development and climate change communities under one brand. In this opinion piece authored by scientists from a variety of international agricultural and climate research communities, we argue that the concept needs to be evaluated critically because the relationship between the three dimensions is poorly understood, such that practically any improved agricultural practice can be considered climate-smart. This lack of …

Ccaat/Enhancer-Binding Protein Delta (C/Ebp-Delta) Expression In Antarctic Fishes: Implications For Cell Cycle And Apoptosis, Isaac Martin Sleadd

Dissertations and Theses

Chapter 1: Antarctic fishes are extremely cold adapted. Despite their inability to upregulate heat shock proteins, recent studies have demonstrated a capacity for heat response in these animals. A cDNA microarray study looked at the Notothenioid fish Trematomus bernacchii and revealed heat sensitivities for hundreds of genes, two of which code for members of the CCAAT/Enhancer-binding protein (C/EBP) family of transcription factors. These molecular switches are best known for their roles in apoptosis, inflammation and cell cycle arrest. This dissertation further elucidates the role of C/EBP-delta in the Antarctic fishes T. bernacchii and Pagothenia borchgrevinki.

Chapter 2: C/EBP-delta is constitutively …

Collaborative Research: Globec Pan-Regional Synthesis: End-To-End Energy Budgets In Us-Globec Regions, Andrew C. Thomas

University of Maine Office of Research Administration: Grant Reports

The research addresses the overarching question: are marine food webs leading to fisheries controlled from the top-down, the bottom up, or a combination of the two? To address this question we will (1) compare end-to-end energy budgets of the 4 US-GLOBEC study regions in the context of top-down v. bottom-up forcing, (2) assess the skills of the regional models in capturing basic material fluxes, (3) extract diagnostics from the regional models that will be used to evaluate the effects of climate change and fishing pressure across GLOBEC regions and (4) develop quantitative methods to compare the diagnostics. The major successes …

Juxtaposing Nasa’S Aeronet Aod With Carb Pm Data Over The San Joaquin Valley To Facilitate Multi-Angle Imaging Spectroradiometer (Misr) Pm Pollution Research, John Kanemoto

STAR Program Research Presentations

Airborne particulate matter (PM) has been shown to increase the risk for asthma, chronic bronchitis, cardiopulmonary complications, and respiratory cell membrane damage/infection/leakage. PM levels are currently analyzed from two perspectives: stationary land-based monitoring (LBM) sites and total Aerosol Optical Depth (AOD) atmospheric column measurements. Both perspectives often leave miles of space between measuring locations and will have a continually increasing cost from introducing/maintaining sites. The Multi-angle Imaging SpectroRadiometer (MISR) satellite team hopes to begin investigating/archiving PM levels comprehensively via inputting MISR AOD measurements into a function/model which predicts the amount of ground level PM.

In the future, multivariable spatial correlations …

Phytoplankton Life History Events: Resting Stages And Physiological Cell Death, Christine R. Kozik

Theses and Dissertations

Understanding and predicting changes in phytoplankton populations requires knowledge of key life history processes such as recruitment from benthic resting stages and losses due to sedimentation and cell death. Currently, these processes are poorly understood in freshwater systems. Phytoplankton resting stage and cell death life history events were separately examined in two freshwater systems in Wisconsin, four northern lakes and an urban pond. In the norther lakes, sedimentation and benthic recruitment were examined using sediment and recruitment traps that were sampled weekly over two summers. Sedimentation and benthic recruitment contributed little to changes in standing crop chl a, but rather …

Understanding Basin Specific Life History Characteristics Of Lake Mead Quagga Mussels (Dreissena Bugensis) And A Potential Treatment Using Uv Radiation In Laboratory Studies, Melissa Thaw

UNLV Theses, Dissertations, Professional Papers, and Capstones

The quagga mussel (Dreissena bugensis) is an aquatic invasive species that is spreading throughout Lake Mead and other western waterways. Unlike their native waters in Eurasia, Lake Mead exhibits year round warm temperatures, high calcium levels and a lack of natural predators, all of which are very favorable conditions for their growth and spread. Dreissena bugensis reproduce and colonize hard surfaces rapidly, where they filter large amounts of water. They disrupt the aquatic food chain and interfere with infrastructure that is exposed to lake water. There is an urgent need to understand Dreissena bugensis life history characteristics within this new …

Systematics, Climate, And Ecology Of Fossil And Extant Nyssa (Nyssaceae, Cornales) And Implications Of Nyssa Grayensis Sp. Nov. From The Gray Fossil Site, Northeast Tennessee, Nathan R. Noll

Electronic Theses and Dissertations

The Late Hemphillian (latest Miocene or earliest Pliocene, 7-4.5 Ma) Gray Fossil Site in northeastern Tennessee is interpreted to represent a lacustrine paleokarst fed by a river or stream. This research focuses on the morphological and systematic relations of Nyssa endocarps (fruit pits) from the fossil site to extinct and extant Nyssa species. A combination of metric and nonmetric traits allows recognition of a new species: Nyssa grayensis sp. nov. This fossil species shares the most similarities with the extant Nyssa ogeche Bartram ex Marshall from southeast North America and the Eocene fossil Nyssa eolignitica Berry from western Tennessee. Affinities …

Hysteresis Between Coral Reef Calcification And The Seawater Aragonite Saturation State, Ashly Mcmahon, Isaac R. Santos, Tyler Cyronak, Bradley D. Eyre

Marine & Environmental Sciences Faculty Articles

Some predictions of how ocean acidification (OA) will affect coral reefs assume a linear functional relationship between the ambient seawater aragonite saturation state (Ω_a) and net ecosystem calcification (NEC). We quantified NEC in a healthy coral reef lagoon in the Great Barrier Reef during different times of the day. Our observations revealed a diel hysteresis pattern in the NEC versus Ω_a relationship, with peak NEC rates occurring before the Ω_a peak and relatively steady nighttime NEC in spite of variable Ω_a. Net ecosystem production had stronger correlations with NEC than light, temperature, nutrients, pH, …