Life Sciences Commons^™

Promotingclimate Change Awareness And Adaptive Planning In Atlantic Fisheries Communities Using Dialogue-Based Participatory Vulnerability Analysis, Mapping, And Collaborative Systems Dynamic Modeling, Thomas Webler, Seth Tuler, Esperanza Stancioff, Elizabeth Fly

University of Maine Office of Research Administration: Grant Reports

The goals for the proposed project are twofold:

• First, the project will improve understandings of how a changing climate will affect fishing communities’ abilities to maintain marine fisheries and the local economies historically dependent upon them.

• Second, the project will investigate the role of a structured dialogue and participatory modeling process to support decision makers in fishing communities addressing consequences, vulnerabilities, and adaptive strategies in a context of climate stressors.

Rapid: Effect Of A Very Low Nao Event On The Abundance Of The Lipid-Rich Planktonic Copepod, Calanus Finmarchicus, In The Gulf Of Maine, Jeffrey Runge

University of Maine Office of Research Administration: Grant Reports

Test the hypothesis that a distinctly lower abundance of the planktonic copepod, Calanus finmarchicus in the Gulf of Maine follows the occurrence of very negative winter phases of the North Atlantic Oscillation (NAO). In 2010, the station-based winter NAO index was -4.64, even more intense than the negative (-3.78) 1996 NAO winter index. If a two-year lagged relationship between very negative NAO winter indices and Calanus abundance in the Gulf of Maine is valid, cooler water from the Labrador Sea should replace Atlantic Temperate Slope Water in the GoM in 2012, inducing a major climatic ecosystem event on the New …

Rapid: Natural Laboratories In The Chilean Fjords: Studying Reproduction And Development In Emergent Deep-Sea Corals, Rhian G. Waller

University of Maine Office of Research Administration: Grant Reports

The northern Patagonian fjords lie on the interface between the high Andes Mountains in the east and the South Pacific Ocean, formed thousands of years ago through erosive glacial activity and tectonic sinking (Borgel, 1970). Around 12,000 years ago the icefields in the Chiloé Interior Sea began to open, leaving behind over 15,000km2 of fjords, channels and gulfs (Clapperton, 1994). The waters within the fjords are influenced by strong tides, large volumes of freshwater runoff, and upwelling of deep-ocean waters as well as steep climatic gradients from north to south (observed in parameters such as temperature, wind intensity and precipitation; …

Understanding Copepod Life-History And Diversity Using A Next-Generation Zooplankton Model, Andrew J. Pershing, Frederic Maps, Nicholas R. Record

University of Maine Office of Research Administration: Grant Reports

The main goal of our project is to understand the patterns of diversity and biogeography in marine copepods. To achieve this goal, we developed a unique modeling framework to simulate the trade-offs between growth, development, and fecundity in marine copepods.

We developed a new approach to modeling growth and development in metazoans. We applied this approach to marine copepods, and used it to understand relationships between copepod body size and temperature, copepod biodiversity patterns, and copepod biogeography. This project also provided support for experiments to look at how copepod body size impacts the particle size spectrum.

We used our model …

Understanding Copepod Life-History And Diversity Using A Next-Generation Zooplankton Model, Andrew J. Pershing, Frederic Maps, Nicholas Record

University of Maine Office of Research Administration: Grant Reports

Evolution has shaped the physiology, life history, and behavior of a species to the physical conditions and to the communities of predators and prey within its range. Within a community, the number of species is determined by both physical properties such as temperature and biological properties like the magnitude and timing of primary productivity, and ecological interactions such as predation. Despite well-known correlations between diversity and properties such as temperature, the mechanisms that drive these correlations are not well-described, especially in the oceans. The investigators will conduct a model-based investigation of diversity patterns in marine ecosystems, focusing on calanoid copepods. …

Forest - Atmosphere Interaction At Howland Forest, David Dail

University of Maine Office of Research Administration: Grant Reports

The overall goal of the proposed work is to understand the various (and interacting) impacts of a changing climate on carbon cycling at the Howland AmeriFlux site, representative of an important component of the North American boreal forest. Our focus is on quantitatively partitioning respiration into aboveground and belowground processes and into autotrophic and heterotrophic processes to better constrain carbon cycle models. Whole-ecosystem flux measurements generally do a poor job of separating photosynthetic uptake from respiration and cannot constrain (or assign) respiration to the different sources within an ecosystem. This partitioning is difficult, but we will take advantage of new …

Functional Diversity Of Subsurface Deposit Feeders, Peter A. Jumars, Sara M. Lindsay

University of Maine Office of Research Administration: Grant Reports

The major goals of the project are to gain a comprehensive understanding of polychaete chemosensory behaviors below the sediment-water interface and to understand how burrowing displaces sediment grains.

A method and apparatus for investigating subsurface properties of sediment, soil, snow, food stuff and other soft materials incorporates a probe head, preferably in the form of a coil spring that functions as a screw thread, which moves into the soil, snow, sediment, food stuff or other soft material, isolates a column of the material and applies tension to that column while measuring the applied force with a force sensor.

Cnh: Collaborative Research: Direct And Indirect Coupling Of Fisheries Through Economic, Regulatory, Environmental, And Ecological Linkages, Andrew J. Pershing, Yong Chen, Jeffrey Runge

University of Maine Office of Research Administration: Grant Reports

The productivity and resilience of fisheries are subject to a multitude of dynamic and interrelated influences that arise from complex coupling of fish populations with the natural and human systems of which they are a part. With few exceptions, fisheries currently are managed independently, ignoring important natural and human linkages among them. The biological productivity, sustainability, and consequently human benefits of complex fishery systems may be substantially increased if these linkages are better understood and if this understanding is applied to management. The American lobster (Homarus americanus), Atlantic herring (Clupea harengus) and Northeast multispecies groundfish fisheries in the Gulf of …

Collaborative Research: Globec Pan-Regional Synthesis: End-To-End Energy Budgets In Us-Globec Regions, Andrew C. Thomas

University of Maine Office of Research Administration: Grant Reports

The research addresses the overarching question: are marine food webs leading to fisheries controlled from the top-down, the bottom up, or a combination of the two? To address this question we will (1) compare end-to-end energy budgets of the 4 US-GLOBEC study regions in the context of top-down v. bottom-up forcing, (2) assess the skills of the regional models in capturing basic material fluxes, (3) extract diagnostics from the regional models that will be used to evaluate the effects of climate change and fishing pressure across GLOBEC regions and (4) develop quantitative methods to compare the diagnostics. The major successes …

Eager: Collaborative Research: Developing Transformation Technologies For Porphyra, Susan H. Brawley

University of Maine Office of Research Administration: Grant Reports

The genome of the marine red alga Porphyra umbilicalis is being sequenced by the Joint Genome Institute. The sequence information will help scientists address many fundamental questions, because Porphyra spp. belong to an ancient eukaryotic lineage, are important human foods ("nori"), have complex life histories, and---even compared to other intertidal organisms--- possess an unusually stress-tolerant metabolism. Computer-based analyses of the new genomic data will be sufficient to address some research questions, but most studies (e.g., the basis of Porphyra's tolerance to extreme drying or high light) will require experimental approaches based upon bioinformatics analyses. This project will develop the essential …

Collaborative Research: Life Histories Of Species In The Genus Calanus In The North Atlantic And North Pacific Oceans And Responses To Climate Forcing, Jeffrey Runge, Andrew J. Pershing

University of Maine Office of Research Administration: Grant Reports

Species in the genus Calanus are predominant in the mesozooplankton of the North Atlantic and North Pacific Oceans. Their key role in marine food web interactions has been recognized in GLOBEC programs, both in the U.S. and internationally. Considerable knowledge of life history characteristics, including growth, reproduction, mortality, diapause behavior and demography has been acquired from both laboratory experiments and measurements at sea. This project reviews and synthesizes this knowledge and uses it to develop an Individual Based Life Cycle model for sibling species in two sympatric species pairs, C.marshallae and C. pacificus in the North Pacific Ocean and C. …

Dissertation Research: Eco-Evolutionary Effects Of An Aquatic Consumer: Linking Phenotypic Diversity To Community And Ecosystem Responses, Kevin S. Simon, Quenton Tuckett, Michael T. Kinnison

University of Maine Office of Research Administration: Grant Reports

This research addresses the interaction between ecological and evolutionary processes by examining the recent evolution of a common invasive fish species, the white perch, in lakes and the consequences of this evolution for community and ecosystem dynamics. White perch have successfully invaded lakes spanning a productivity gradient, which provides diverse selective pressures that may result in altered fish morphology, physiology and ecological role. Adaptation by these fish may, in turn, feed back to affect lake productivity and community structure through several ecological and chemical pathways. This project tests the hypothesis that this rapid evolutionary divergence within a single species has …

Improvements To Sampling From The Research Vessel Ira C, Mary Jane Perry

University of Maine Office of Research Administration: Grant Reports

The University of Maine's Darling Marine Center is awarded a grant to equip the 42-ft Ira C., the Center's largest vessel, with a well instrumented CTD, including optical sensors and a small array of sampling bottles plus a winch with conducting cable so that CTD work from the Ira C. no longer needs to depend on users bringing their own CTD and lowering by hand. This proposal is to expand the environments and variables within effective reach of the University of Maine's marine laboratory, the Ira C. Darling Marine Center (the Center) in midcoast Maine. The Center is within a …

U.S. Globec: Nwa Georges Bank - Processes Controlling Abundance Of Dominant Copepod Species On Georges Bank: Local Dynamics And Large-Scale Forcing, Jeffrey A. Runge

University of Maine Office of Research Administration: Grant Reports

A fundamental goal of Biological Oceanography is to understand how underlying biological-physical interactions determine abundance of marine organisms. For animal populations, it is well known that factors controlling survival during early life stages (i.e., recruitment) are strong determinants of adult population size, but understanding these processes has been difficult due to model and data limitations. Recent advances in numerical modeling, together with new 3D data sets, provide a unique opportunity to study the biological-physical processes controlling zooplankton population size. This project uses an existing state-of-the-art biological/physical numerical model (FVCOM) together with the recently processed large 3D data set from the …

Collaborative Proposal: Cascadia Slope Circulation Study, Mary Jane Perry

University of Maine Office of Research Administration: Grant Reports

Intellectual Merits:
This project will continue to observe and understand the physics and biology of the highly productive northeast Pacific boundary current region over the continental slope off Washington and Oregon - the Cascadia slope - with an autonomous, sustained presence. For over a year, Seagliders, long-range autonomous underwater vehicles, have been deployed to survey the temperature, salinity, dissolved, oxygen, chlorophyll fluorescence, and optical backscatter structure of the slope off. Washington. Seagliders have collected data on sections from the continental shelf edge offshore 220 km at fortnightly intervals, reporting back data after each dive, on deployments typically lasting 4-5 months. …

Collaborative Research: The Response Of Lakes To Disturbance And Climate Change: Calibrating Sedimentary Records To Test The Landscape Position Concept, Jasmine E. Saros

University of Maine Office of Research Administration: Grant Reports

Landscape disturbance and climate change affect lakes in proportion to their contact with ground water, sometimes resulting in different responses in neighboring lakes. This project develops methods for reconstructing past water chemistry and food webs of lakes. The biological and chemical deposits in surface sediment samples will be compared with the water in 62 modern lakes. The resulting relationships will be tested by comparing sediment cores with 24 years of observations from the North Temperate Lakes Long Term Ecological Research (NTL-LTER) site. The methods will then be used to reconstruct 150 years of history for several lakes, adding perspective to …

Collaborative Research: Abandoned Elephant Seal Colonies In Antarctica: Integration Of Genetic, Isotopic, And Geologic Approaches Toward Understanding Holocene Environmental Change, Brenda L. Hall

University of Maine Office of Research Administration: Grant Reports

During previous NSF-sponsored research, the PI's discovered that southern elephant seal colonies once existed along the Victoria Land coast (VLC) of Antarctica, a region where they are no longer observed. Molted seal skin and hair occur along 300 km of coastline, more than 1000 km from any extant colony. The last record of a seal at a former colony site is at ~A.D. 1600. Because abandonment occurred prior to subantarctic sealing, disappearance of the VLC colony probably was due to environmental factors, possibly cooling and encroachment of land-fast, perennial sea ice that made access to haul-out sites difficult. The record …

U.S.-Korea Cooperative Research: Carbon Monoxide As A Substrate For Microbial Maintenance, Gary M. King

University of Maine Office of Research Administration: Grant Reports

Bacteria play an important role in the global budget of carbon monoxide (CO). Largely unknown bacterial populations in soils and the water column of aquatic systems oxidize hundreds of teragrams per year, or about 10%-20% of the estimated annual flux to the atmosphere. In spite of their biogeochemical significance, relatively little is known about the identity of CO-oxidizing populations active in situ, their phylogenic and physiological diversity or the importance of CO as substrate for their basic metabolic needs. of CO oxidizers. It is clear that CO at high concentrations (> 1000 ppm) can serve as a sole source of …

Collaborative Proposal: Form And Function Of Phytoplankton In Unsteady, Low Reynolds-Number Flows, Peter Jumars, Lee Karp-Boss

University of Maine Office of Research Administration: Grant Reports

Small-scale flow dynamics at low Reynolds numbers (Re) are important to phytoplankton cells in delivery of nutrients, sensory detection by and physical encounter with herbivores, accumulation of bacterial populations in the "phycosphere" or region immediately surrounding phytoplankton cells and coagulation of cells themselves as a mechanism terminating blooms. In nature most phytoplankton experience unsteady flows, i.e., velocities near the cells that vary with time due to the intermittency of turbulence and to discontinuous, spatially distributed pumping by herbivores. This unsteadiness has not previously been taken into account in models or measurements with plankton. Moreover, there have been decade- and century- …

Ner: Exploratory Research On Developing A Nanoscale Sensing Device For Measuring The Supply Of Iron To Eukaryotic Phytoplankton In Natural Seawater, Mark L. Wells

University of Maine Office of Research Administration: Grant Reports

The long delay in recognizing the potentially key role of Fe in coastal marine systems has been in large part because of the complexity of microbial:Fe interactions in seawater. There still is no analytical method for determining biologically available Fe for either prokaryotic or eukaryotic phytoplankton. However, there is evidence that Fe availability to eukaryotic phytoplankton can be regulated by additions of the fungal siderophore desferrioxamine B (DFB) to coastal waters. The DFB-Fe complex not only is unavailable for uptake at significant rates, but also outcompetes the natural organic ligand classes in seawater for Fe. Measurement of DFB-Fe concentrations in …

Linking Bioturbation And Sensory Biology: Chemoreception Mechanisms In Deposit-Feeding Polychaetes, Sara M. Lindsay, Paul Rawson

University of Maine Office of Research Administration: Grant Reports

Soft-sediment benthic habitats are ubiquitous in the marine environment and typically feature macrofaunal assemblages that include large numbers of deposit-feeding invertebrates such as polychaetes, bivalves, gastropods, crustaceans, holothurians, and hemichordates. Via their feeding, modulated in part by chemoreception, these organisms have profound effects on the ecology, biology, geology, and chemistry of their habitats. Very little is known, however, concerning the physiology and molecular biology of chemoreception in deposit feeders.

This research is a comprehensive investigation of the sensory mechanisms coordinating chemoreception in deposit feeding spionid polychaetes. It directly addresses this lack of information and will therefore have a significant impact …

Collaborative Research: Globec-01: Tidal Front Mixing And Exchange On Georges Bank: Controls On The Production Of Phytoplankton, Zooplankton, And Larval Fishes, David W. Townsend, Robert Houghton

University of Maine Office of Research Administration: Grant Reports

Georges Bank supports a rich fishery because: (1) large portions of the bank are shallow enough that light-limitation of phytoplankton is usually not important; (2) deep waters rich in inorganic nutrients are available for mixing onto the bank; and (3) the Bank's clockwise circulation can retain the planktonic stages of important fish species. The tidally mixed front (TMF) is central to the productivity of Georges Bank through the processes of nutrient injection in the north and retention of larvae on the south flank. These two regions are connected by a circulation pathway along the front in which nutrients lead to …

Hydrodynamic Regulation Of Reproduction In Fucoid Algae: A Regional Model And Consequences For Population Structure, Susan H. Brawley

University of Maine Office of Research Administration: Grant Reports

Fucoid algae dominate most rocky shores across the north Atlantic and contribute substantially to structuring of the coastal ecosystem. Reproduction in fucoid algae is sensitive to hydrodynamic conditions, resulting in high fertilization success because gamete release occurs only under calm conditions. These findings have important implications for asynchrony in gamete release between populations and the scale of population isolation. This study will 1) test a nascent model describing when successful fucoid reproduction can occur, 2) determine whether hybridization between Fucus vesiculosus and other fucoid algae occurs when gamete release is delayed by turbulent conditions, and 3) analyze whether genetic differentiation …

Collaborative Research: Functional And Genomic Analysis Of Polysymbiosis In The Wood-Boring Bivalve Lyrodus Pedicellatus, Daniel L. Distel

University of Maine Office of Research Administration: Grant Reports

Each day massive quantities of wood and woody plant materials enter the oceans, providing resources upon which a large variety of marine organisms depend. However, the biological communities supported by marine wood are only poorly understood. Globally, the most important consumers of marine wood are wood-boring bivalves of the family Teredinidae (shipworms, primarily found above 150 m) and Pholadidae (subfamily Xylophagainae, primarily found in the deep sea, 150-8000 m). These clams depend on intracellular endosymbiotic bacteria (endocytobionts) to help them consume a substrate (lignocellulose) that cannot be utilized by most other animals. Two functions have been proposed for symbionts of …

Collaborative Research: Toward Environmental Genomics: Can We Estimate Bacterial Diversity In The Ocean?, Daniel L. Distel

University of Maine Office of Research Administration: Grant Reports

Environmental genomics, wherein the total genomic diversity of a natural community may be sampled and analyzed in an ecological context, remains an elusive goal. This is due, at least in part, to (I) a lack of reliable estimates of total community diversity and (II) a lack of information regarding the exact phylogenetic, genomic and ecological units measured by commonly used diversity estimators. Although ribosomal RNA approaches have provided the first steps towards diversity estimation, and are widely used as a proxy for unique bacterial types in natural populations, the genomic unit a ribotype measures remains largely unexplored. It is generally …

Collaborative Research: Origins Of Cods On Georges Bank: Contributions Of Early Developmental Stages For The Scotian Shelf, David W. Townsend, Irv Kornfield, Linda Kling

University of Maine Office of Research Administration: Grant Reports

Recent work in the Georges Bank-Gulf of Maine area has documented significant, and apparently episodic, fluxes of Scotian Shelf Water (SSW) from the Nova Scotian continental shelf to Georges Bank. SSW is a relatively cold and fresh water mass with a significant component from the St. Lawrence River, and is commonly identifiable with temperature-salinity analyses of hydrographic data and in satellite images of sea surface temperature. One such flux episode was observed last March (1997) in satellite imagery and from shipboard hydrographic sampling on Georges Bank. Qualitative at-sea analyses of ichthyoplankton sampled on the March cruise revealed a remarkably tight …

Proteins Of Oxygen-Binding And Energy Metabolism In Muscles Of Antarctic Fishes: Evolutionary Adjustments To Life At Cold Temperature, Bruce Sidell, Michael E. Vayda

University of Maine Office of Research Administration: Grant Reports

The suborder Notothenoidei is the dominant fish group of the Southern Ocean surrounding Antarctica, both in terms of number of species and biomass. For about fourteen million years, these highly successful fish evolved under stable thermal conditions that result in body temperatures of about zero degrees centigrade throughout their life histories. Evolution this cold environment has led to unusual physiological and biochemical characteristics. In some cases, the characteristics contribute to overcoming constraints of cold temperature on biological processes. In other instances, mutations that probably would have been lethal in warmer, less oxygen-rich environments than the Southern Ocean have been retained …

Food Substrates And Digestive Capabilitites Of Marine Deposit Feeders, Lawrence M. Mayer

University of Maine Office of Research Administration: Grant Reports

Deposit feeders play several important roles in determining whether organic material is demineralized or buried. These animals function to make surfaces available for microbial growth and move particles both horizontally and vertically within the seabed at a pace that far exceeds sedimentation. The central problem in understanding deposit feeders is to identify the materials that they utilize and to determine the sources of those materials. The interdisciplinary approach of this project is to combine a chemical reactor theory of digestion with measurements of the processing of enzymatically available amino acids, focusing on rates of hydrolysis in, and absorption from, the …

Emersion Stress In Intertidal Seaweeds: Role Of Active Oxygen, Ian R. Davison

University of Maine Office of Research Administration: Grant Reports

The study will examine stress-tolerance in two major groups of perennial intertidal macroalgae, the red and brown seaweeds. The research will test the hypothesis that active oxygen is involved in emersion stress of intertidal seaweeds. Damage due to active oxygen will be determined in stress-tolerant and stress- susceptible species exposed to emersion stress by measuring the peroxidation of membrane lipids. Plants will be grown in laboratory culture under conditions that increase their ability to withstand emersion stress. If the research hypothesis is correct, increases in stress tolerance should be associated with increased levels of antioxidants and/or protective enzymes. The proposed …

School Of Marine Sciences / Darling Marine Center, Kevin J. Eckelbarger

University of Maine Office of Research Administration: Grant Reports

Over the last six years, the University of Maine has made an unprecedented investment in its marine laboratory, the Darling Marine Center to benefit both University faculty and visiting researchers and their students. Facility improvements include many new laboratory and offices spaces, more research instrumentation, and basic support facilities such as a dining hall and new classrooms. The inauguration of a Visiting Investigation Program in 1991, the expansion of educational offerings, and the growth of a large undergraduate internship program, have resulted in a population explosion that shows no sign of abating. To set priorities for improvements, the University has …