Life Sciences Commons^™

Climate Change, Coral Reef Ecosystems, And Management Options For Marine Protected Areas, Brian D. Keller, Daniel F. Gleason, Elizabeth Mcleod, Christa M. Woodley, Satie Airame, Billy D. Causey, Alan M. Friedlander, Rikki Grober-Dunsmore, Johanna E. Johnson, Steven Miller, Robert S. Steneck

Marine & Environmental Sciences Faculty Articles

Marine protected areas (MPAs) provide place-based management of marine ecosystems through various degrees and types of protective actions. Habitats such as coral reefs are especially susceptible to degradation resulting from climate change, as evidenced by mass bleaching events over the past two decades. Marine ecosystems are being altered by direct effects of climate change including ocean warming, ocean acidification, rising sea level, changing circulation patterns, increasing severity of storms, and changing freshwater influxes. As impacts of climate change strengthen they may exacerbate effects of existing stressors and require new or modified management approaches; MPA networks are generally accepted as an …

Spatial Distribution Of Petroleum Hydrocarbons In Sediment Cores From Blind Pass, St. Pete Beach, Florida, Charles M. Featherstone, John Proni, Thomas P. Carsey, Cheryl J. Brown, Madeleine M. Adler, Patricia Blackwelder, Husain Alsayegh, Teresa A. Hood, Christina Piela, Donald S. Mccorquodale Jr.

Marine & Environmental Sciences Faculty Reports

One hundred and one sediment cores were collected to characterize the spatial distribution of petroleum hydrocarbons within and just outside Blind Pass, St. Pete Beach, Florida. Twenty-five percent of the cores exhibited levels of petroleum hydrocarbons above detection limits of the gas chromatograph/flame ionization detector (GC/FID) (0.01 mg/Kg), but at generally low concentrations. Petroleum hydrocarbon speciation studies of these samples (gas chromatography/mass spectroscopy [GC/MS]) indicate above-detection level (1 μg/Kg) petroleum hydrocarbons are similar to the non-volatile petroleum hydrocarbons found in a Bouchard 155 reference sample collected after the 1993 oil spill in the area, but are in a much degraded …

Health Impacts Of Traffic Related Air Pollution, Amit U. Raysoni, Wen-Wahi Li

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Ambient air pollution can be a serious cause of concern for any community. Anthropogenic ambient air pollutants can emanate from industries, traffic, geological sources and domestic heating and cooking. However, studies have shown that traffic related air pollution can have far more detrimental health effects than non-combustion sources. These adverse health effects are most profound in sensitive populations like the elderly and young children. The World Health Organization (WHO) attributes more than 300 million deaths every year to ambient air pollution. The WHO’s Air Quality Guidelines (AQG) and the United States Environment Protection Agency’s (USEPA) National Ambient Air Quality Standards …

Evaluation Of Color Imagery And Direct Referencing For Mapping Submersed Aquatic Vegetation In Chesapeake Bay - Final Report, David J. Wilcox, R J. Orth, Jennifer R. Whiting, Anna K. Kenne, Amy L. Owens, Leah S. Nagy

Reports

The VIMS Annual Submersed Aquatic Vegetation (SAV) Monitoring Program has used black and white aerial photography to map SAV in Chesapeake Bay each year from 1984 to the present, with the exception of 1988. In 2008, VIMS initiated a pilot project to address two potential enhancements identified by a recent external program review: color film and direct referencing technology. Simultaneous color and black and white imagery was captured for three regions. In addition, GPS/inertial mapping unit (IMU) direct referencing data was acquired for two of the regions.

Recruitment, Substrate Quality And Standing Stock Monitoring In Support Of Noaa-Acoa Oyster Restoration Projects In The Great Wicomico, Rappahannock, Piankatank And Lynnhaven River Basins, 2004-2006 : Supplementary Materials, Mark Luckenbach, Paige G. Ross

Reports

Many factors affect the success of oyster restoration efforts. This supplemental report details the VIMS effort under this NOAA-funded program to monitor some of those factors in the Great Wicomico, Rappahannock, Piankatank and Lynnhaven Rivers. Specifically, it details monitoring of (1) oyster settlement at two reefs in each of those tributaries from May to November from 2004 – 2006, along with additional widespread recruitment monitoring in the Lynnhaven River in 2005 & 2006, (2) substrate condition on the same eight reefs during spring, summer and fall of 2004 – 2006, (3) oyster abundance on Shell Bar reef in the Great …

Methods For Karyotyping And For Localization Of Developmentally Relevant Genes On The Chromosomes Of The Purple Sea Urchin Strongylocentrotus Purpuratus, Celeste C. Eno, Stefanie A. Boettger, Charles W. Walker

Biology Faculty Publications

No abstract provided.

Arsenic Transport By Zebrafish Aquaglyceroporins, Mohamad Hamdi, Marco A. Sanchez, Lauren C. Beene, Qianyong Liu, Scott M. Landfear, Barry P. Rosen, Zijuan Liu

HWCOM Faculty Publications

Background

Arsenic is one of the most ubiquitous toxins and endangers the health of tens of millions of humans worldwide. It is a mainly a water-borne contaminant. Inorganic trivalent arsenic (As^III) is one of the major species that exists environmentally. The transport of As^III has been studied in microbes, plants and mammals. Members of the aquaglyceroporin family have been shown to actively conduct As^III and its organic metabolite, monomethylarsenite (MAs^III). However, the transport of As^III and MAs^III in in any fish species has not been characterized.

Results

In this study, five members …

Influence Of Extreme Storm Events On West Florida Shelf Cdom Distributions, Robyn N. Conmy, Paula G. Coble, Jennifer P. Cannizzaro, Cynthia A. Heil

Marine Science Faculty Publications

Colored Dissolved Organic Matter (CDOM) distribution and signatures provide vital information about the amount and composition of organic material in aquatic environments. This information is critical for deciphering the sources and biogeochemical pathways of organic carbon, and thus vital to the understanding of carbon cycling and budgets. Waters of the West Florida Shelf are heavily influenced by many river systems on Florida's Gulf Coast that, to the first order, control CDOM distributions on the shelf. Three storm events during 2004 and 2005 (Hurricane Charley, Hurricane Wilma, and a Winter Storm) profoundly altered the typical distribution of CDOM fluorescence and absorption …

Low-Frequency Exchange Of Mass Between Ocean Basins, Don P. Chambers, Josh K. Willis

Marine Science Faculty Publications

We examine the Gravity Recovery and Climate Experiment (GRACE) data and output from an ocean model to quantify mass fluctuations for the Pacific, Atlantic, and Indian Ocean basins from August 2002 until December 2008. The monthly spatial mean is removed to study interbasin mass exchange. We find a seasonal exchange of mass between the Atlantic and Pacific that is similar to one documented previously, although the amplitude observed by GRACE is about 20% lower than that simulated by an ocean model. There are also significant fluctuations with periods longer than 1 year. We find large interannual exchanges in 2005 and …

Sensitivity Of The Carbon Cycle In The Arctic To Climate Change, A. David Mcguire, Leif G. Anderson, Torben R. Christensen, Scott Dallimore, Laodong Guo, Daniel J. Hayes, Martin Heimann, Robie W. Macdonald, Nigel Roulet

Faculty Publications

The recent warming in the Arctic is affecting a broad spectrum of physical, ecological, and human/cultural systems that may be irreversible on century time scales and have the potential to cause rapid changes in the earth system. The response of the carbon cycle of the Arctic to changes in climate is a major issue of global concern, yet there has not been a comprehensive review of the status of the contemporary carbon cycle of the Arctic and its response to climate change. This review is designed to clarify key uncertainties and vulnerabilities in the response of the carbon cycle of …

A Review Of The Lethal Spiny Lobster Virus Pav1 - Ten Years After Its Discovery, Donald C. Behringer, Mark J. Butler Iv, Jeffrey D. Shields

Biological Sciences Faculty Publications

In 1999, we discovered that juvenile Caribbean spiny lobsters (Panulirus argus) in the Florida Keys were infected with PaV1 (Panulirus argus virus 1), the first naturally occurring pathogenic virus reported from lobsters. The virus profoundly affects their biology and ecology. PaV1 is probably wide-spread in the Caribbean with confirmed infections from the United States (Florida), St Croix, Mexico, and Belize; and anecdotal reports from the Bahamas and Cuba. Mean prevalence in the Florida Keys has been stable since 1999 (5 - 8%), but has risen from 2.7% to 10.9% in Mexico (Puerto Morelos), the only other country where …

Career: Physiological Genetics Of The Dwarf Surf Clam, Mulinia Lateralis, Paul D. Rawson

University of Maine Office of Research Administration: Grant Reports

Heterosis, or hybrid vigor, is a condition where more heterozygous individuals physiologically outperform more homozygous individuals. Although heterosis has often been reported for marine bivalves, as well as other taxa, the physiological and genetic bases of heterosis are still poorly understood. The proposed research will use a combination of quantitative and molecular genetic approaches to examine the physiological and genetic underpinnings of heterosis in the dwarf surf clam, Mulinia lateralis. The specific goals of this work are:

1) to determine the genetic and physiological basis of growth rate variation,
2) to estimate the degree to which the physiological components …

Trophic Structure Of The Northwest Hawaiian Islands And Resident Monk Seals (Monachus Schaundslandi) During The Twentieth Century, Nina M. Thompson, Amy Hirons, Charles W. Potter, Charles Littnan

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Hawaiian monk seal (Monachus schauinslandi) is an endangered species only found within the Hawaiian Archipelago. The majority of the breeding population for this seal is located around six islands in the Northwest Hawaiian Island chain (NWHI). Overall, both juvenile and adult seals have a wide range in δ¹³C and δ¹⁵N from 1912-2006 (δ¹³C: -12.5‰; δ¹⁵N: 12.6‰). Seals in the northern NWHI were enriched in δ¹³C by nearly 2‰ and depleted in δ¹⁵N by nearly 6‰ during the 96 years. Meanwhile, seals within the middle and …

Leucothoidae, Kristine N. White, James Darwin Thomas

Marine & Environmental Sciences Faculty Articles

Four genera and 17 species of leucothoids, the majority of these belonging to the genus Leucothoe, are herein reported from the Great Barrier Reef. Fifteen species are new to science and only Anamixis bazimut has been previously reported from the Great Barrier Reef.

Stormwater Management Database For The City Of Dover, New Hampshire, Raymond E. Grizzle, Krystin M. Ward

PREP Reports & Publications

The overall goal of the project was to make a significant contribution to the Piscataqua Region Estuaries Partnership goal of increasing oyster (Crassostrea virginica) bottom in New Hampshire, and to do so using methods that positively affect multiple species. The focus was on those organisms (mainly macroalgae, invertebrates, and fish) that spend most of their time on oyster reefs—the resident species. A 0.5 hectare (1.25 acres) area was restored in August 2007 by constructing twelve mini-reefs (each ~6 m in diameter) in an area protected from harvest using spat-on-shell (“spat seeding”) from remotely set larvae. There was a consistent trend …

The Lobster Bulletin, Fall 2009, Lobster Institute, University Of Maine

Lobster Bulletin

The Lobster Bulletin newsletter includes research updates, and information on lobsters and the lobster industry. The Lobster Institute at the University of Maine is dedicated to protecting and conserving the lobster resource, and enhancing lobstering as an industry and a way of life.

Headlines in the Fall 2009 issue include:

• Lobster Council of Canada Has Great Potential
• Lobster Institute Events of Interest
• 2010 Canadian/U.S. Lobstermen's Town Meeting
• Research Report: Lobster Health Coalition Makes Progress on Baseline Health Data
• Research Report: LFA 33/34 Lobster Moult Timing & Quality Monitoring Project Update
• Fisheries On-Line Forum Launched

Relationship Of Reef Fish Assemblages And Topographic Complexity On Southeastern Florida Coral Reef Habitats, Brian K. Walker, Lance K. B. Jordan, Richard E. Spieler

Marine & Environmental Sciences Faculty Articles

Reef fish assemblage relationships with in situ and lidar topographic measurements across the seascape were analyzed to evaluate the possibility of using lidar metrics as a proxy for prediction models. In situ topographic complexity (i.e., linear rugosity) was measured from 346 point-count fish surveys spanning the reef seascape. Lidar topographic measurements (i.e., surface rugosity, elevation, and volume) were obtained from a high-resolution lidar bathymetric dataset of each survey's footprint. The survey sites were characterized by an independently derived benthic habitat map. Reef fish abundance and species richness appeared to increase with increasing topographic complexity. Although significant, the relationship was weak. …

Net And Acoustic Examination Of Bathypelagic Nekton On The Mid-Atlantic Ridge, C. I. H. Anderson, J. Horne, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Spatial distributions of organisms play a key role in facilitating trophic interactions, which influence pelagic ecosystem structure and function. This study combines discrete net trawl sampling with continuous acoustic measurements to investigate the distribution of bathypelagic (1000- 3000 m depth) nekton biomass along the Mid-Atlantic Ridge from Iceland to the Azores. Two, previously unknown, acoustic scattering layers (ASLs) were observed using 18 kHz echosounder data. The first extended approximately 200 m from 2000 m depth and was ubiquitous wherever bottom depth allowed. The second, found within the 1500-2000 m depth stratum, only occurred south of the Sub-Polar Front. Backscatter from …

Preliminary Results On Feeding Ecology Of Stomiiforme Fishes Of The Northern Mid-Atlantic, Vanda Carmo, Odd Aksel Bergstad, Tone Falkenhaug, Gui Menezes, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Few previous studies have focused specifically on the role of the mid-ocean ridges in the ecology of pelagic fishes. This study targets on a dominant nekton component of the mid- Atlantic mesopelagic ichthyofauna - the Stomiiformes - and their food resources including zooplankton and other nekton. Its main goal is to characterize the diets of several species of these midwater fish towards understanding the trophic pathways of the deep-pelagic nekton of the northern MAR. The study material was provided by the G. O. Sars 2004 Expedition under the International project MAR-ECO. On the lab fish were dissected and diet items …

The Emerging Role Of Lidar Remote Sensing In Coastal Research And Resource Management Full Access, John C. Brock, Samuel J. Purkis

Marine & Environmental Sciences Faculty Articles

Knowledge of coastal elevation is an essential requirement for resource management and scientific research. Recognizing the vast potential of lidar remote sensing in coastal studies, this Special Issue includes a collection of articles intended to represent the state-of-the-art for lidar investigations of nearshore submerged and emergent ecosystems, coastal morphodynamics, and hazards due to sea-level rise and severe storms. Some current applications for lidar remote sensing described in this Special Issue include bluegreen wavelength lidar used for submarine coastal benthic environments such as coral reef ecosystems, airborne lidar used for shoreline mapping and coastal change detection, and temporal waveform-resolving lidar used …

Interpretation Of Single-Beam Acoustic Backscatter Using Lidar-Derived Topographic Complexity And Benthic Habitat Classifications In A Coral Reef Environment, Greg Foster, Brian K. Walker, Bernhard Riegl

Marine & Environmental Sciences Faculty Articles

Producing thematic coral reef benthic habitat maps from single-beam acoustic backscatter has been hindered by uncertainties in interpreting the acoustic energy parameters E1 (tail of 1st echo) and E2 (complete 2nd echo), typically limiting such maps to sediment classification schemes. In this study, acoustic interpretation was guided by high-resolution lidar (LIght Detection And Ranging) bathymetry. Each acoustic record, acquired from a BioSonics DT-X echosounder and multiplexed 38 and 418 kHz transducers, was paired with a spatially-coincident value of a lidar-derived proxy for topographic complexity, reef-volume (RV), and its membership to one of eight benthic habitat classes, delineated from lidar imagery, …

Nutrient Enrichment And Food Web Composition Affect Ecosystem Metabolism In An Experimental Seagrass Habitat, Amanda C. Spivak, Elizabeth A. Canuel, J. Emment Duffy, J. Paul Richardson

VIMS Articles

Food web composition and resource levels can influence ecosystem properties such as productivity and elemental cycles. In particular, herbivores occupy a central place in food webs as the species richness and composition of this trophic level may simultaneously influence the transmission of resource and predator effects to higher and lower trophic levels, respectively. Yet, these interactions are poorly understood.

Indicadores Funcionales Y Estructurales Para Evaluar El Estado De Conservación De Humedales Costeros En El Sur De Tamaulipas, Alejandro Fierro-Cabo

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

El manejo adecuado de las zonas costeras requiere de herramientas que permitan detectar procesos degradantes en los ecosistemas estratégicos prestadores de servicios ambientales. Los indicadores ecológicos responden adecuadamente a esta necesidad en humedales costeros. Se estudiaron ocho humedales de origen y características distintas, con afectaciones contrastantes conocidas. Se seleccionaron los indicadores que mejor discriminaron los sitios y se utilizaron para evaluar la evolución del estado de conservación de los mismos. La correspondencia ecológica entre indicadores funcionales y estructurales no se confirmó en todos los casos, por lo que es necesario utilizar ambos tipos para obtener un mejor diagnóstico. En dicha …

A Method Of Successive Corrections Of The Control Subspace In The Reduced-Order Variational Data Assimilation, Max Yaremchuk, Dmitri A. Nechaev, Gleb Panteleev

Faculty Publications

A version of the reduced control space four-dimensional variational method (R4DVAR) of data assimilation into numerical models is proposed. In contrast to the conventional 4DVAR schemes, the method does not require development of the tangent linear and adjoint codes for implementation. The proposed R4DVAR technique is based on minimization of the cost function in a sequence of low-dimensional subspaces of the control space. Performance of the method is demonstrated in a series of twin-data assimilation experiments into a nonlinear quasigeostrophic model utilized as a strong constraint. When the adjoint code is stable, R4DVAR's convergence rate is comparable to that of …

Detecting Marine Hazardous Substances And Organisms: Sensors For Pollutants, Toxins, And Pathogens, O. Zielinski, J. A. Busch, A. D. Cembella, Kendra L. Daly, J. Engelbrektsson, A. K. Hannides, H. Schmidt

Marine Science Faculty Publications

Marine environments are influenced by a wide diversity of anthropogenic and natural substances and organisms that may have adverse effects on human health and ecosystems. Real-time measurements of pollutants, toxins, and pathogens across a range of spatial scales are required to adequately monitor these hazards, manage the consequences, and to understand the processes governing their magnitude and distribution. Significant technological advancements have been made in recent years for the detection and analysis of such marine hazards. In particular, sensors deployed on a variety of mobile and fixed-point observing platforms provide a valuable means to assess hazards. In this review, we …

Reticulate Evolution And Marine Organisms: The Final Frontier?, Michael L. Arnold, Nicole D. Fogarty

Marine & Environmental Sciences Faculty Articles

The role that reticulate evolution (i.e., via lateral transfer, viral recombination and/or introgressive hybridization) has played in the origin and adaptation of individual taxa and even entire clades continues to be tested for all domains of life. Though falsified for some groups, the hypothesis of divergence in the face of gene flow is becoming accepted as a major facilitator of evolutionary change for many microorganisms, plants and animals. Yet, the effect of reticulate evolutionary change in certain assemblages has been doubted, either due to an actual dearth of genetic exchange among the lineages belonging to these clades or …

Movements And Habitat Utilization Of Two Longbill Spearfish Tetrapturus Pfluegeri In The Eastern Tropical South Atlantic Ocean, David W. Kerstetter, Eric S. Orbesen, S. Robert Snodgrass, Eric Prince

Marine & Environmental Sciences Faculty Articles

The longbill spearfish Tetrapturus pfleugeri Robins and de Sylva, 1963, is a small istiophorid billfish found in the Atlantic Ocean and adjacent seas that occurs as an infrequent by-catch in recreational and commercial pelagic fisheries. Although some data exist on diet and reproduction based on dead specimens, little is known of the species’ habitat preferences or individual movement patterns. In 2004, two longbill spearfish were tagged with pop-up satellite archival tags (PSATs) near Ascencion Island in the South Atlantic for 11 d and 45 d. Individual movement tracks derived from light-based geolocation estimates suggested little relationship with sea surface temperature …

Mean Dynamic Topography Of The Ocean Derived From Satellite And Drifting Buoy Data Using Three Different Techniques, Nikolai Maximenko, Peter Niiler, Marie-Helene Rio, Oleg Melnichenko, Luca Centurioni, Boris Galperin, Don. P. Chambers, Victor Zlotnicki

Marine Science Faculty Publications

Presented here are three mean dynamic topography maps derived with different methodologies. The first method combines sea level observed by the high-accuracy satellite radar altimetry with the geoid model of the Gravity Recovery and Climate Experiment (GRACE), which has recently measured the earth’s gravity with unprecedented spatial resolution and accuracy. The second one synthesizes near-surface velocities from a network of ocean drifters, hydrographic profiles, and ocean winds sorted according to the horizontal scales. In the third method, these global datasets are used in the context of the ocean surface momentum balance. The second and third methods are used to improve …

Water Quality Conditions And Restoration Of Submerged Aquatic Vegetation (Sav) In The Tidal Freshwater James River, 2008, Ken Moore, Betty Berry Neikirk, Erin C. Shields, David Parrish

Reports

In 2008, wild celery (Vallisneria americana), water stargrass (Heteranthera dubia) and hydrilla (Hydrilla verticilata) shoots were transplanted into shallow water sites in the Hopewell region of the tidal James River and sampled for survivorship and growth throughout the SA V growing season. Water quality sampling was conducted at bi-weekly intervals throughout the year for water column nutrients, chlorophyll a, suspended solids, water transparency and other chemical and physical constituents important for SA V growth. Continuous water quality sampling was also conducted along the James River from the mouth of the Chickahominy River to the upstream limits of tidal water at …

Remote Sensing And Mapping Of Tamarisk Along The Colorado River, Usa: A Comparative Use Of Summer-Acquired Hyperion, Thematic Mapper And Quickbird Data, Gregory A. Carter, Kelly L. Lucas, Gabriel A. Blossom, Cheryl L. Lassitter, Dan M. Holiday, David S. Mooneyhan, Danielle R. Fastring, Tracy R. Holcombe, Jerry A. Griffith

Faculty Publications

Tamarisk (Tamarix spp., saltcedar) is a well-known invasive phreatophyte introduced from Asia to North America in the 1800s. This report compares the efficacy of Landsat 5 Thematic Mapper (TM5), QuickBird (QB) and EO-1 Hyperion data in discriminating tamarisk populations near De Beque, Colorado, USA. As a result of highly correlated reflectance among the spectral bands provided by each sensor, relatively standard image analysis methods were employed. Multispectral data at high spatial resolution (QB, 2.5 m Ground Spatial Distance or GSD) proved more effective in tamarisk delineation than either multispectral (TM5) or hyperspectral (Hyperion) data at moderate spatial resolution (30 m …