Life Sciences Commons^™

Lamprey Watershed Education And Outreach, Lamprey River Watershed Association, Dawn Genes, Lamprey River Watershed Association. Lamprey River Nominating Committee

PREP Reports & Publications

The Lamprey River Nomination Committee sought the assistance of the Piscataqua Region Estuaries Partnership (PREP) to complete an extensive and detailed information package to nominate the Lamprey River and its major tributaries to the NH Rivers Management and Protection Program. The nomination package was due at DES on June 1, 2010, was reviewed and accepted by the State Rivers Management Committee in September and forwarded to the Commissioner of DES. The nomination is now working through the NH legislature with hearings anticipated during the spring 2011 session. If passed, the bill should be signed by Governor Lynch in July of …

A Study To Minimize Or Eliminate Hardbottom And Reef Impacts From Anchoring Activities In Designated Anchorages At The Ports Of Miami And Palm Beach, Brian K. Walker

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Symposium Support: Integrative Biology Of Animal Regeneration - Seattle, Wa January 2010, Sara M. Lindsay, Alexandra Bely

University of Maine Office of Research Administration: Grant Reports

Certain animals can regrow (regenerate) lost body parts, whereas others cannot. This is a fascinating and important area of biology, but why only some animals have this ability is still poorly understood. The purpose of this conference symposium is to bring together researchers working on regeneration from a variety of research perspectives in order to foster integrative approaches to studying this question. Ten researchers working from different perspectives in regeneration biology, ranging from molecular and cell biology to ecology, will present current research findings and participants will discuss the state of the field and needed areas for future research. Additional …

Deglacial Abrupt Climate Change In The Atlantic Warm Pool: A Gulf Of Mexico Perspective, Carlie Williams, Benjamin P. Flower, David W. Hastings, Thomas P. Guilderson, Kelly A. Quinn, Ethan A. Goddard

Marine Science Faculty Publications

During the last deglaciation, Greenland ice core and North Atlantic sediment records exhibit multiple abrupt climate events including the Younger Dryas cold episode (12.9-11.7 ka). However, evidence for the presence of the Younger Dryas in the Gulf of Mexico (GOM) and the relationship between GOM sea surface temperature (SST) and high-latitude climate change is less clear. We present new Mg/Ca-SST records from two varieties of the planktonic foraminifer Globigerinoides ruber (white and pink) to assess northern GOM SST history from approximately 18.4-10.8 ka. Thirty-five accelerator mass spectrometry (AMS) C-14 dates from Orca Basin core MD02-2550 provide excellent age control and …

Watershed Survey And Pilot Lcc Project, Norman Turgeon, Three Ponds Protective Association

PREP Reports & Publications

This describes two projects accomplished in 2010 by the Three Ponds Protective Association (TPPA) and several partners to identify and reduce soil erosion due to storm water runoff into the Milton Three Ponds

Fertilizer And Stormwater Runoff Outreach Program In Newcastle, Nh, David Anderson

PREP Reports & Publications

The New Hampshire Coastal Protection Partnership (NH Coast) implemented a year long pilot public education and outreach program in the Town of New Castle aimed at reducing nitrogen pollution from lawn fertilizers and promoting rain gardens as a solution to storm water runoff and nonpoint source pollution. A total of 77 landowners representing 138 acres of land pledged to either not use lawn fertilizers or use only low phosphorus, slow release nitrogen brands. The program also resulted in the installation of New Castle’s first demonstration rain garden.

Distributions Of Sharks Across A Continental Shelf In The Northern Gulf Of Mexico, J. Marcus Drymon, Sean P. Powers, John Dindo, Brian Dzwonkowski, Terry A. Henwood

University Faculty and Staff Publications

Declines in shark populations have sparked researchers and fishery managers to investigate more prudent approaches to the conservation of these fish. As managers strive to improve data collection for stock assessment, fisheries-independent surveys have expanded to include data-deficient areas such as coastal regions. To that end, a catch series from a nearshore survey off Alabama was combined with data from a concurrent offshore survey with identical methodology to examine the depth use of sharks across the continental shelf (2–366 m). The combined data set contained 22 species of sharks collected from 1995 to 2008: 21 species in the offshore data …

Analysis Of Nitrogen Loading Reductions For Wastewater Treatment Facilities And Non-Point Sources In The Great Bay Estuary Watershed, Philip Trowbridge, Thomas S. Burack, Michael J. Walls, Harry T. Stewart

PREP Reports & Publications

In 2009, the New Hampshire Department of Environmental Services (DES) published a proposal for numeric nutrient criteria for the Great Bay Estuary. The report found that total nitrogen concentrations in most of the estuary needed to be less than 0.3 mg N/L to prevent loss of eelgrass habitat and less than 0.45 mg N/L to prevent occurrences of low dissolved oxygen. Based on these criteria and an analysis of a compilation of data from at least seven different sources, DES concluded that 11 of the 18 subestuaries in the Great Bay Estuary were impaired for nitrogen. Under the Clean Water …

Water Quality Conditions And Restoration Of Submerged Aquatic Vegetation (Sav) In The Tidal Freshwater James River 2009, Ken Moore, Betty Neikirk, Erin C. Shields, David Parrish

Reports

In 2009, wild celery (Vallisneria americana) and water stargrass (Heteranthera dubia) shoots were transplanted into shallow water sites in the Hopewell region of the tidal James River and sampled for survivorship and growth throughout the SAV growing season. Water quality sampling was conducted at bi-weekly to monthly intervals throughout the year for water column nutrients, chlorophyll a, suspended solids, water transparency and other chemical and physical constituents important for SA V growth. Objectives of this restoration and water quality study were to: 1) expand the SA V transplanted plots within the study areas previously transplanted; 2) conduct water quality sampling …

Ocean Mass From Grace And Glacial Isostatic Adjustment, D. Chambers, John Wahr, Mark E. Tamisea, R Steven Nerem

Marine Science Faculty Publications

We examine geoid rates and ocean mass corrections from two published global glacial isostatic adjustment (GIA) models, both of which have been used in previous studies to estimate ocean mass trends from Gravity Recovery and Climate Experiment (GRACE) satellite gravity data. These two models are different implementations of the same ice loading history and use similar mantle viscosity profiles. The model results are compared with each other and with geoid rates determined from GRACE during August 2002 to November 2009. When averaged over the global ocean, the two models have rates that differ by nearly 1 mm yr⁻¹ of …

Caribbean Corals In Crisis: Record Thermal Stress, Bleaching, And Mortality In 2005, Erinn M. Muller, Mark C. Eakin, Jessica A. Morgan, Scott F. Heron, Tyler B. Smith, Gang Liu, Lorenzo Alvarez-Filip, Bart J. Baca, Erich Bartles, Carolina Bastidas

Ocean Engineering and Marine Sciences Faculty Publications

The rising temperature of the world's oceans has become a major threat to coral reefs globally as the severity and frequency of mass coral bleaching and mortality events increase. In 2005, high ocean temperatures in the tropical Atlantic and Caribbean resulted in the most severe bleaching event ever recorded in the basin. Methodology/Principal Findings: Satellite-based tools provided warnings for coral reef managers and scientists, guiding both the iming and location of researchers' field observations as anomalously warm conditions developed and spread across the greater Caribbean region from June to October 2005. Field surveys of bleaching and mortality exceeded prior efforts …

Distribution Of Zooplankton Densities Associated With The Florida Current And Subsurface, Amy Hirons, Jonathan Shenker, Alexander Soloviev

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

No abstract provided.

Development And Evaluation Of Methods For Surveying Fish Populations In Nearshore Waters, Philip Smith, Ian Burrett, David Bailey, Francis Neat, David Donnan, Katherine Dunlop, James Thorburn, Rosanna Milligan, Steve Bastiman, Jane Dodd

Marine & Environmental Sciences Faculty Reports

1. Nearshore areas provide critical habitat for a range of fish species targeted by commercial and recreational fisheries, both of which make an important contribution to local economies in rural areas. However, established trawl survey methods are not suited to many nearshore areas, owing to shallow depths, obstructions on the sea bed or vulnerable habitats, so there is a lack of information on fish abundance in these areas.
2. The aim of the present project was to develop and test survey methods applicable to Scottish inshore waters, focussing on baited underwater cameras, fish traps, systematic rod-and-line surveys and observations of fish bycatch …

Hearing Loss In Stranded Odontocete Dolphins And Whales, David Mann, Mandy Hill-Cook, Charles Manire, Danielle Greenhow, Eric Montie, Jessica Powell, Randall Wells, Gordon Bauer, Petra Cunningham-Smith, Robert Lingenfelser, Robert Digiovanni, Abigale Stone, Micah Brodsky, Robert Stevens, George Kieffer, Paul Hoetjes

Biology Faculty Publications and Presentations

The causes of dolphin and whale stranding can often be difficult to determine. Because toothed whales rely on echolocation for orientation and feeding, hearing deficits could lead to stranding. We report on the results of auditory evoked potential measurements from eight species of odontocete cetaceans that were found stranded or severely entangled in fishing gear during the period 2004 through 2009. Approximately 57% of the bottlenose dolphins and 36% of the rough-toothed dolphins had significant hearing deficits with a reduction in sensitivity equivalent to severe (70-90 dB) or profound (>90 dB) hearing loss in humans. The only stranded short-finned …

Representation Of Bed Stresses Within A Model Of Chesapeake Bay, Courtney K. Harris, J. Paul Rinehimer, Sung-Chan Kim

Reports

This project focused on numerical modeling of the Estuarine Turbidity Maximum (ETM) with the goal of improving the representation of the bottom boundary layer and turbulent mixing within the Chesapeake Bay Program’s model [see Cerco and Noel, 2004]. The effort has been part of the EPA’s sediment modeling initiative for the Chesapeake Bay, in coordination with the U.S. Army Corps of Engineers (USACE), Engineering Research and Development Center (ERDC). Research activities focused on the Upper Chesapeake Bay and major tributaries in Maryland (such as the Potomac River); and assisted management of the U.S. EPA TMDL (Total Maximum Daily Load) project …

Development Of Hydrodynamic And Water Quality Models For The Lynnhaven River System, Mac Sisson, Harry V. Wang, Yuepeng Li, Jian Shen, Albert Y. Kuo, Wenping Gong, Mark Brush, Ken Moore

Reports

No abstract provided.

Numerical Modeling Scenario Runs To Assess Tss And Chlorophyll Reductions Caused By Ecosystem Restoration, Lynnhaven River, Mac Sisson, Yuepeng Li, Harry V. Wang, Albert Kuo

Reports

No abstract provided.

The Development Of A Management Tool To Assess Bacterial Impacts In Rudee Inlet, Virginia Beach, Mac Sisson, Jian Shen, W. G. Reay, Eduardo J. Miles, Albert Y. Kuo, Harry V. Wang

Reports

No abstract provided.

Caribbean Corals In Crisis: Record Thermal Stress, Bleaching, And Mortality In 2005, C. Mark Eakin, Jessica A. Morgan, Scott F. Heron, Tyler B. Smith, Gang Liu, Lorenzo Alvarez-Filip, Bart J. Baca, Erich Bartels, Carolina Bastidas, Claude Bouchon, Marilyn Brandt, Andrew W. Bruckner, Lucy Bunkley-Williams, Andrew Cameron, Billy D. Causey, Mark Chiappone, Tyler R. L. Christensen, M. James C. Crabbe, Owen Day, Elena De La Guardia, Guillermo Diaz-Pulido, Daniel Diresta, Diego L. Gil-Agudelo, David S. Gilliam, Robert N. Ginsburg, Shannon Gore, Hector M. Guzman, James C. Hendee, Edwin A. Hernandez-Delgado, Ellen Husain, Christopher F. G. Jeffrey, Ross J. Jones, Eric Jordan-Dahlgren, Les S. Kaufman, David I. Kline, Philip A. Kramer, Judith C. Lang, Diego Lirman, Jennie Mallela, Carrie Manfrino, Jean-Philippe Marechal, Ken Marks, Jennifer Mihaly, W. Jeff Miller, Erich M. Mueller, Erinn M. Muller, Carlos A. Orozco Toro, Hazel A. Oxenford, Daniel Ponce-Taylor, Norman Quinn, Kim B. Ritchie, Sebastian Rodriguez, Alberto Rodriguez Ramirez, Sandra Romano, Jameal F. Samhouri, Juan A. Sanchez, George P. Schmahl, Burton V. Shank, William J. Skirving, Sascha C. C. Steiner, Estrella Villamizar, Sheila M. Walsh, Cory Walter, Ernesto Weil, Ernest H. Williams, Kimberly Woody Roberson, Yusri Yusuf

Marine & Environmental Sciences Faculty Articles

Background: The rising temperature of the world’s oceans has become a major threat to coral reefs globally as the severity and frequency of mass coral bleaching and mortality events increase. In 2005, high ocean temperatures in the tropical Atlantic and Caribbean resulted in the most severe bleaching event ever recorded in the basin.

Methodology/Principal Findings: Satellite-based tools provided warnings for coral reef managers and scientists, guiding both the timing and location of researchers’ field observations as anomalously warm conditions developed and spread across the greater Caribbean region from June to October 2005. Field surveys of bleaching and mortality exceeded prior …

A Fish Out Of Water: Gill And Skin Remodeling Promotes Osmo- And Ionoregulation In The Mangrove Killifish Kryptolebias Marmoratus, Danielle M. Leblanc, Chris M. Wood, Douglas S. Fudge, Patricia A. Wright

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The euryhaline, amphibious mangrove killifish Kryptolebias marmoratus is known to survive weeks out of water in moist environments. We tested the hypothesis that the skin is a site of osmo- and ionoregulation in K. marmoratus. We predicted that under terrestrial conditions, gill and skin remodeling would result in an enhanced role for skin and a diminished role for the gills in osmo- and ionoregulation. Fish were exposed to water—either freshwater (FW, 1‰) or hypersaline water (saltwater [SW], 45‰)—or air over a moist surface of FW or SW for 9 d and then recovered in water. When fish were emersed …

Fish Communities On The World's Warmest Reefs: What Can They Tell Us About The Effects Of Climate Change In The Future?, David A. Feary, John A. Burt, Andrew G. Bauman, Paolo Usseglio, Peter F. Sale, Georgenes Cavalcante

Marine & Environmental Sciences Faculty Articles

To examine the role of climatic extremes in structuring reef fish communities in the Arabian region, reef fish communities were visually surveyed at four sites within the southern Persian Gulf (also known as the Arabian Gulf and The Gulf), where sea-surface temperatures are extreme (range: 12–35° C annually), and these were compared with communities at four latitudinally similar sites in the biogeographically connected Gulf of Oman, where conditions are more moderate (range: 22–31° C annually). Although sites were relatively similar in the cover and composition of coral communities, substantial differences in the structure and composition of associated fish assemblages were …

Molecular Mechanisms Of Persistence Of Mutualistic Bacteria Photorhabdus In The Entomopathogenic Nematode Host, Ruisheng An, Parwinder Grewal

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Symbioses between microbes and animals are ubiquitous, yet little is known about the intricate mechanisms maintaining such associations. In an emerging mutualistic model system, insect-pathogenic bacteria Photorhabdus and their insect-parasitic nematode partner Heterorhabditis, we found that the bacteria undergo major transcriptional reshaping in the nematode intestine. Besides general starvation mechanisms, the bacteria induce cellular acidification to slow down growth, switch to pentose phosphate pathway to overcome oxidative stress and nutrition limitation, and shed motility but develop biofilm to persist in the nematode intestine until being released into the insect hemolymph. These findings demonstrate how the symbiotic bacteria reduce their …

Environmental Symbiont Acquisition May Not Be The Solution To Warming Seas For Reef-Building Corals, Daniel A. Brazeau, Mary Alice Coffroth, Daniel M. Poland, Eleni L. Petrou, Jennie C. Holmberg

Pharmaceutical Sciences Faculty Publications

Background: Coral reefs worldwide are in decline. Much of the mortality can be attributed to coral bleaching (loss of the coral’s intracellular photosynthetic algal symbiont) associated with global warming. How corals will respond to increasing oceanic temperatures has been an area of extensive study and debate. Recovery after a bleaching event is dependent on regaining symbionts, but the source of repopulating symbionts is poorly understood. Possibilities include recovery from the proliferation of endogenous symbionts or recovery by uptake of exogenous stress-tolerant symbionts.

Methodology/Principal Findings: To test one of these possibilities, the ability of corals to acquire exogenous symbionts, bleached colonies …

The Influence Of Wave Exposure On Coral Community Development On Man-Made Breakwater Reefs, With A Comparison To A Natural Reef, John A. Burt, David A. Feary, Paolo Usseglio, Andrew G. Bauman, Peter F. Sale

Marine & Environmental Sciences Faculty Articles

Breakwaters dominate shorelines in many coastal urban areas, providing substantial hard-bottom habitat upon which diverse and abundant reef communities develop. In recognition of their potential ecological and economic importance, there is increasing interest in understanding how design features can influence community development. We investigated the influence of wave exposure on breakwater coral communities in Dubai, United Arab Emirates. Coral community composition, cover, size structure, recruitment, mortality, and growth rates were compared quarterly between two windward and two leeward breakwater sites for 1 yr to explore the influence of wave exposure on coral community development. Comparisons also were made with a …

The Peril Of The Plankton, Dawn Vaughn, Jonathan D. Allen

Arts & Sciences Articles

The pelagic environment is characterized by unevenly distributed resources and risks. Such unpredictability presents adaptive challenges to diverse planktonic organisms including the larvae of benthic marine invertebrates. Estimates of mortality during planktonic development are highly variable, ranging from 0% to 100% per day. Predation is considered a significant source of this mortality, but what explains the variability in estimates of the mortality of marine invertebrate larvae? While differential exposure of larval prey to predators may explain these widely variable estimates, adaptations that reduce vulnerability of marine larvae to predators may also be important. Although there are excellent reviews of predation …

Conserving The Pawtuckaway River Focus Area And Kennard Hill Focus Area : Final Report, Brian Hart

PREP Reports & Publications

The Piscataqua Region Estuaries Partnership provided $8,000 to support the Southeast Land Trust of New Hampshire’s land conservation work within the Pawtuckaway River and Kennard Hill Focus Areas, two areas identified by the Land Conservation Plan for New Hampshire’s Coastal Watershed. Through this grant, the Southeast Land Trust has: permanently conserved two parcels totaling 90.55 acres within the Pawtuckaway River Focus Area; entered into four agreements to acquire and conserve 221.4 acres within the Pawtuckaway River Focus Area and 190 acres within the Kennard Hill Focus Area; and facilitated, through the Wetlands Reserve Program, the protection of 60 acres within …

Eelgrass Distribution In The Great Bay Estuary For 2009 : Final Report, Frederick T. Short

PREP Reports & Publications

Eelgrass in the Great Bay Estuary in 2009 was once again present only in Great Bay itself and in Portsmouth Harbor. For the second year in a row, there was no eelgrass in Little Bay or in the Piscataqua River. In 2009, there was a continued loss of eelgrass biomass in Great Bay; there has been a 66.4% loss of biomass in Great Bay since 1996 and distribution is 30% less than in 1996. Although eelgrass distribution in Great Bay itself increased between 2008 and 2009, primarily due to continued expansion from natural seeding of bare areas, the Bay’s eelgrass …

Results Of The Gulfwatch 2010 Samples : Memorandum, Matthew A. Wood

PREP Reports & Publications

The purpose of this memorandum is to document the sample collection activities for Gulfwatch 2010. .

Effects Of Bubbles And Sea Spray On Air–Sea Exchange In Hurricane Conditions, Alexander Soloviev, Roger Lukas

Marine & Environmental Sciences Faculty Articles

The lower limit on the drag coefficient under hurricane force winds is determined by the break-up of the air–sea interface due to Kelvin–Helmholtz instability and formation of the two-phase transition layer consisting of sea spray and air bubbles. As a consequence, a regime of marginal stability develops. In this regime, the air–sea drag coefficient is determined by the turbulence characteristics of the two-phase transition layer. The upper limit on the drag coefficient is determined by the Charnock-type wave resistance. Most of the observational estimates of the drag coefficient obtained in hurricane conditions and in laboratory experiments appear to lie between …

Time Series Of Bio-Optical Properties In A Subtropical Gyre: Implications For The Evaluation Of Interannual Trends Of Biogeochemical Properties, Zhongping Lee, Shaoling Shang, Chuanmin Hu, Marlon Lewis, Robert Arnone, Yonghong Li, Bertrand Lubac

Marine Science Faculty Publications

With a validated Quasi‐Analytical Algorithm, an 11 year (1998–2008) monthly time series of the primary optical properties of waters in the center of the South Pacific gyre was developed from Sea‐viewing Wide Field‐of‐view Sensor (SeaWiFS) and Moderate Resolution Imaging Spectroradiometer (MODIS). Also derived are chlorophyll a (Chl a) concentrations with the operational empirical algorithms for SeaWiFS and MODIS. The optical properties include the absorption coefficient (at 443 nm) of phytoplankton (a_ph) and that of the combination of detritus and gelbstoff (a_dg). From these time series, we further derived their annual background (summer low) …