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Full-Text Articles in Life Sciences

Coastal Wetland Response To Sea-Level Rise In A Fluvial Estuarine System, Karim Alizad, Scott C. Hagen, James T. Morris, Stephen C. Medeiros, Matthew V. Bilskie, John F. Weishampel Nov 2016

Coastal Wetland Response To Sea-Level Rise In A Fluvial Estuarine System, Karim Alizad, Scott C. Hagen, James T. Morris, Stephen C. Medeiros, Matthew V. Bilskie, John F. Weishampel

Faculty Publications

Coastal wetlands are likely to lose productivity under increasing rates of sea-level rise (SLR). This study assessed a fluvial estuarine salt marsh system using the Hydro-MEM model under four SLR scenarios. The Hydro-MEM model was developed to apply the dynamics of SLR as well as capture the effects associated with the rate of SLR in the simulation. Additionally, the model uses constants derived from a 2-year bioassay in the Apalachicola marsh system. In order to increase accuracy, the lidar-based marsh platform topography was adjusted using Real Time Kinematic survey data. A river inflow boundary condition was also imposed to simulate …


Coastal Wetland Response To Sea-Level Rise In A Fluvial Estuarine System, Karim Alizad, Scott C. Hagen, James T. Morris, Stephen C. Medeiros, Matthew V. Bilskie, John F. Weishampel Oct 2016

Coastal Wetland Response To Sea-Level Rise In A Fluvial Estuarine System, Karim Alizad, Scott C. Hagen, James T. Morris, Stephen C. Medeiros, Matthew V. Bilskie, John F. Weishampel

Faculty Publications

Coastal wetlands are likely to lose productivity under increasing rates of sea-level rise (SLR). This study assessed a fluvial estuarine salt marsh system using the Hydro-MEM model under four SLR scenarios. The Hydro-MEM model was developed to apply the dynamics of SLR as well as capture the effects associated with the rate of SLR in the simulation. Additionally, the model uses constants derived from a 2-year bioassay in the Apalachicola marsh system. In order to increase accuracy, the lidar-based marsh platform topography was adjusted using Real Time Kinematic survey data. A river inflow boundary condition was also imposed to simulate …


Assessing The Effects Of The Mud Snail, Ilyanassa Obsoleta, On The Benthic Microalgal Community In A Pristine Saltmarsh, Miranda Gore Jun 2016

Assessing The Effects Of The Mud Snail, Ilyanassa Obsoleta, On The Benthic Microalgal Community In A Pristine Saltmarsh, Miranda Gore

Theses and Dissertations

Saltmarshes are among the most productive ecosystems globally. At North Inlet estuary, South Carolina, about one third of the primary production comes from benthic microalgae. During the tidal cycle, mobile microalgae vertically migrate through the upper 3 mm of sediment. At low tide, algae are vulnerable to a variety of grazers, including the mud snail, Ilyanassa obsoleta, which is abundant in tidal creeks. Many species of intertidal snails have been shown to significantly alter the community structure and density of microalgae within the sediment. The purpose of this study was to determine how I. obsoleta affects the benthic microalgae community …


Bioavailability Of Dissolved Organic Matter In The North Inlet Estuary, Andrew Mason Gaines Banks May 2016

Bioavailability Of Dissolved Organic Matter In The North Inlet Estuary, Andrew Mason Gaines Banks

Senior Theses

Dissolved organic matter (DOM) is an important source of carbon and energy for microbial food webs in estuaries. The export of DOM from estuaries to the coastal ocean influences shelf productivity and biogeochemical cycles. Chromophoric dissolved organic matter (CDOM) is an important component of the DOM pool that absorbs light, and is photoreactive. There are various optical properties of CDOM that can be used to indicate the sources of DOM, such as whether or not it is derived from terrestrial or marine environments. In this study, the sources and bioavailability of DOM were characterized in the North Inlet estuary near …


Dynamic Simulation And Numerical Analysis Of Hurricane Storm Surge Under Sea Level Rise With Geomorphologic Changes Along The Northern Gulf Of Mexico, Matthew V. Bilskie, S. C. Hagen, Karim Alizad, S. C. Medeiros, D. L. Passeri, H. F. Needham, A. Cox May 2016

Dynamic Simulation And Numerical Analysis Of Hurricane Storm Surge Under Sea Level Rise With Geomorphologic Changes Along The Northern Gulf Of Mexico, Matthew V. Bilskie, S. C. Hagen, Karim Alizad, S. C. Medeiros, D. L. Passeri, H. F. Needham, A. Cox

Faculty Publications

This work outlines a dynamic modeling framework to examine the effects of global climate change, and sea level rise (SLR) in particular, on tropical cyclone-driven storm surge inundation. The methodology, applied across the northern Gulf of Mexico, adapts a present day large-domain, high resolution, tide, wind-wave, and hurricane storm surge model to characterize the potential outlook of the coastal landscape under four SLR scenarios for the year 2100. The modifications include shoreline and barrier island morphology, marsh migration, and land use land cover change. Hydrodynamics of 10 historic hurricanes were simulated through each of the five model configurations (present day …


The Response Of Runoff And Sediment Loading In The Apalachicola River, Florida To Climate And Land Use Land Cover Change, Paige A. Hovenga, Dingbao Wang, Stephen C. Medeiros, Scott C. Hagen, Karim Alizad Apr 2016

The Response Of Runoff And Sediment Loading In The Apalachicola River, Florida To Climate And Land Use Land Cover Change, Paige A. Hovenga, Dingbao Wang, Stephen C. Medeiros, Scott C. Hagen, Karim Alizad

Faculty Publications

The response of runoff and sediment loading in the Apalachicola River under projected climate change scenarios and land use land cover (LULC) change is evaluated. A hydrologic model using the Soil and Water Assessment Tool was developed for the Apalachicola region to simulate daily runoff and sediment load under present (circa 2000) and future conditions (2100) to understand how parameters respond over a seasonal time frame to changes in climate, LULC, and coupled climate/LULC. The Long Ashton Research Station-Weather Generator was used to downscale temperature and precipitation from three general circulation models, each under Intergovernmental Panel on Climate Change (IPCC) …


Tidal Hydrodynamics Under Future Sea Level Rise And Coastal Morphology In The Northern Gulf Of Mexico, Davina L. Passeri, Scott C. Hagen, Nathaniel G. Plant, Matthew V. Bilskie, Stephen C. Medeiros, Karim Alizad Apr 2016

Tidal Hydrodynamics Under Future Sea Level Rise And Coastal Morphology In The Northern Gulf Of Mexico, Davina L. Passeri, Scott C. Hagen, Nathaniel G. Plant, Matthew V. Bilskie, Stephen C. Medeiros, Karim Alizad

Faculty Publications

This study examines the integrated influence of sea level rise (SLR) and future morphology on tidal hydrodynamics along the Northern Gulf of Mexico (NGOM) coast including seven embayments and three ecologically and economically significant estuaries. A large-domain hydrodynamic model was used to simulate astronomic tides for present and future conditions (circa 2050 and 2100). Future conditions were simulated by imposing four SLR scenarios to alter hydrodynamic boundary conditions and updating shoreline position and dune heights using a probabilistic model that is coupled to SLR. Under the highest SLR scenario, tidal amplitudes within the bays increased as much as 67% (10.0 …


Development And Application Of Foraminiferal Carbonate System Proxies To Quantify Ocean Acidification In The California Current, Emily B. Osborne Jan 2016

Development And Application Of Foraminiferal Carbonate System Proxies To Quantify Ocean Acidification In The California Current, Emily B. Osborne

Theses and Dissertations

The oceanic uptake of anthropogenic carbon has mitigated climate change, but has also resulted in a global average 0.1 decline in surface ocean pH over 20th century known as ocean acidification. The parallel reduction in carbonate ion concentration ([CO32-]) and the saturation state of seawater (Ω) has caused many major calcium carbonate-secreting organisms such as planktonic foraminifera to exhibit impaired calcification. We develop proxy calibrations and down core records that use calcification and geochemical characteristics of planktonic foraminifera as proxies for the marine carbonate system. This study focuses specifically on the surface ocean chemistry of the California Current Ecosystem (CCE), …


Utilization Of Satellite-Derived Salinity To Study Indian Ocean Climate Variability, Joseph Matthew D’Addezio Jan 2016

Utilization Of Satellite-Derived Salinity To Study Indian Ocean Climate Variability, Joseph Matthew D’Addezio

Theses and Dissertations

For several decades, researchers have explored Indian Ocean climate variability primarily using numerical models because of a lack of observations. Remote sensing technology has helped overcome this scarcity of observational data, but satellite-derived salinity has only been recently made available by the ESA’s Soil Moisture and Ocean Salinity (SMOS, operating since November 2009-present) and NASA’s Aquarius SAC-D (operated during June 2011-June 2015) satellites. Along with the Lagrangian in situ Argo floats array, these new datasets may be used to validate widely used numerical models, such as the HYbrid Coordinate Ocean Model (HYCOM), and also potentially observe new salinity phenomena that …


Applicability Of Lidar Technology In Saltmarshes: Landscape-Scale Predictive Models To Local-Scale Biomass Estimation, James Dean Edwards Jr. Jan 2016

Applicability Of Lidar Technology In Saltmarshes: Landscape-Scale Predictive Models To Local-Scale Biomass Estimation, James Dean Edwards Jr.

Theses and Dissertations

The management of saltmarshes requires detailed knowledge of the underlying processes driving their distribution in both time and space to make appropriate management decisions. With most of the world’s population living in the coastal zone and rising sea levels, one of our most important natural resources in the coastal zone faces increasing threat of collapse. This study uses the current state of Light Detection and Ranging (LiDAR) technology to model and predict saltmarsh distribution at a landscape-scale and provide evidence that a terrestrial laser scanner (TLS) can be used to estimate saltmarsh biomass for inclusion into existing models.

Land cover …


Mislabeling Of Commercial Atlantic Cod (Gadus Morhua) Products In Spain, Joshua Helgoe Jan 2016

Mislabeling Of Commercial Atlantic Cod (Gadus Morhua) Products In Spain, Joshua Helgoe

Theses and Dissertations

The mislabeling of commercial fish products is a pervasive, worldwide problem. Most consumers of seafood are unaware this issue directly affects them and can even have negative impacts on their health. Mislabeling occurs when a product’s label is inconsistent with its content. Although mislabeling can be unintentional, deliberate mislabeling is a more common trend to increase profits and/or bypass fishing regulations - a form of economic fraud. Unfortunately, oversight, enforcement, and research are vastly insufficient in relation to the global scale of the problem. In order to add to the small knowledge base on European mislabeling rates, determine if overfished …


Biodegradation Of Highly Weathered Deepwater Horizon Oil, Joel T. Bostic Jan 2016

Biodegradation Of Highly Weathered Deepwater Horizon Oil, Joel T. Bostic

Theses and Dissertations

Oil from the Deepwater Horizon (DwH) spill continues to be found on beaches five years post-spill. Understanding the role of microbes in removing DwH oil from sandy beaches is necessary to elucidate the fate of DwH oil in the coastal zone. Oiled sand patties and non-oiled sand were collected from affected beaches five years post- DwH. Biomarkers in oiled sand indicated that sand patties originated from the DwH spill, however the oil was heavily weathered and dominated by oxygenated hydrocarbons. Microbial communities, as measured by phospholipid fatty acids (PLFA), were present on oiled sand patties and distinct from microbes on …


Decadal Salinity Changes In The Oceanic Subtropical Gyres And Connection To Changes In The Global Water Cycle, Bryce Andrew Melzer Jan 2016

Decadal Salinity Changes In The Oceanic Subtropical Gyres And Connection To Changes In The Global Water Cycle, Bryce Andrew Melzer

Theses and Dissertations

There is evidence that the global water cycle has been undergoing an intensification over several decades as a response to increasing atmospheric temperatures, particularly in regions with skewed evaporation – precipitation (E-P) patterns such as the oceanic subtropical gyres. However, observational data (rain gauges, etc.) can be quite sparse over such areas due to the inaccessibility of open ocean regions. This study utilizes in situ data, reanalysis, and model outputs to infer interannual to decadal scale trends in surface freshwater forcing within remote, evaporation-dominated subtropical regions of the ocean as they pertain to the past and present state of the …