Open Access. Powered by Scholars. Published by Universities.®

Life Sciences Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 30 of 31

Full-Text Articles in Life Sciences

What Can We Learn From Confusing Olivella Columellaris And O. Semistriata, Two Key Species In Panamic Sandy Beach Ecosystems?, Alison Troost, Samantha Rupert, Ariel Cyrus, Frank Paladino, Benjamin Dattilo, Winfried Peters Jul 2014

What Can We Learn From Confusing Olivella Columellaris And O. Semistriata, Two Key Species In Panamic Sandy Beach Ecosystems?, Alison Troost, Samantha Rupert, Ariel Cyrus, Frank Paladino, Benjamin Dattilo, Winfried Peters

Benjamin F. Dattilo

Olivella columellaris (Sowerby 1825) and O. semistriata (Gray 1839) are suspension feeding, swash surfing snails on tropical sandy beaches of the east Pacific. While they often are the numerically dominant macrofaunal element in their habitats, their biology is poorly understood; the two species actually have been confused in all of the few publications that address their ecology. Frequent misidentifications in publications and collections contributed also to an overestimation of the geographic overlap of the two species. To provide a sound taxonomic basis for further functional, ecological, and evolutionary investigations, we evaluated the validity of diagnostic traits in wild populations and …


Patterns Of Life History And Habitat Use Of An Important Recreational Fishery Species, Spotfin Croaker, And Their Potential Fishery Implications, Jonathan Williams, Jeremy Claisse, Daniel Pondella, Lea Medeiros, Charles Valle, Michael Shane Nov 2012

Patterns Of Life History And Habitat Use Of An Important Recreational Fishery Species, Spotfin Croaker, And Their Potential Fishery Implications, Jonathan Williams, Jeremy Claisse, Daniel Pondella, Lea Medeiros, Charles Valle, Michael Shane

Daniel Pondella

Spotfin croakers Roncador stearnsii, a prized recreational catch, were collected throughout the Southern California Bight, primarily as bycatch from a long-term, scientific gill-net collection effort. The maximum otolith-based age in the present study was 24 years—14 years greater than in a previous scale-based aging study. Multiple models were used to estimate mean length at age, including models that utilize larvae as well as juveniles and adults, and the model selection results suggest sexual dimorphism in growth patterns. The juvenile and adult catch per unit effort reflected a clear pattern of habitat selectivity, with fish strongly preferring soft-bottom habitats. Catches …


El Niño Periods Increase Growth Of Juvenile White Seabass (Atractoscion Nobilis) In The Southern California Bight, Jonathan Williams, Larry Allen, Mark Steele, Daniel Pondella Nov 2012

El Niño Periods Increase Growth Of Juvenile White Seabass (Atractoscion Nobilis) In The Southern California Bight, Jonathan Williams, Larry Allen, Mark Steele, Daniel Pondella

Daniel Pondella

Studies of the impact of El Niño periods on marine species have usually focused on negative, highly visible eVects, e.g., decreasing growth rates or increasing mortality due to a decline in primary productivity in typically nutrient rich upwelling zones; but positive effects related to elevated water temperature are also known. This study examined how the growth rate of juvenile white seabass, Atractoscion nobilis, responded to changes in ocean temperature in an El Niño period (1997–1998) in the northern portion of the Southern California Bight, USA. Growth rates of juvenile white seabass during their first 4 years of life were …


Life History, Ecology, And Long-Term Demographics Of Queenfish, Eric Miller, Jonathan Williams, Daniel Pondella, Kevin Herbinson Nov 2012

Life History, Ecology, And Long-Term Demographics Of Queenfish, Eric Miller, Jonathan Williams, Daniel Pondella, Kevin Herbinson

Daniel Pondella

Queenfish Seriphus politus were collected at coastal power plants from San Clemente to Ventura, California. Power functions best described relations between otolith length, width, or weight and either standard length (SL) or total body weight. The length–weight relationship was described by the following equation: weight 1⁄4 10􏰀5 3 SL3.09. Individuals were aged to 12 years by using sagittal otolith sections. Females grew at a significantly faster rate than males. Both sexes reached 50% maturity by 100 mm SL, or shortly after age 1. The total annual instantaneous mortality coefficient was estimated at 0.42. Catalina Harbor (on the windward side of …


New Record Of Pacific Sierra (Scomberomorus Sierra) With Notes On Previous California Records, Jonathan P. Williams, Daniel J. Pondella Ii, Brent M. Haggin, Larry G. Allen Nov 2012

New Record Of Pacific Sierra (Scomberomorus Sierra) With Notes On Previous California Records, Jonathan P. Williams, Daniel J. Pondella Ii, Brent M. Haggin, Larry G. Allen

Daniel Pondella

On 22 October 2006, a Pacific sierra (Scomberomorus sierra) was caught by gillnet near Mother’s Beach, Marina del Rey, Los Angeles County, California (33º58’50"N, 118º27’25"W) during sampling for juvenile white seabass (Atractoscion nobilis). This catch represents the northernmost record of Pacific sierra, and one of several specimens known from California.


Environews #1, Richard B. Philp Nov 2012

Environews #1, Richard B. Philp

Richard B. Philp

Environews #1 is, hopefuly, the first of a series dealing with current issues of environmental concern. This issue discusses the possible role of climate change in the massive floods that followed hurricane sandy, depletion of the world's fish stocks, the possible role, bothe positive and negative, of aquaculture, and the trend to seek oil in increasingly environmentally dangerous venues.


Ecomorphology Of Plesiosaur Flipper Geometry, F. O’Keefe Sep 2012

Ecomorphology Of Plesiosaur Flipper Geometry, F. O’Keefe

F. Robin O’Keefe

The Plesiosauria is an extinct group of marine reptiles once common in mesozoic seas. Previous work on plesiosaur hunting styles has suggested that short-necked, large-headed animals were pursuit predators, whereas long-necked, small-headed animals were ambush predators. This study presents new data on the aspect ratios (ARs) of plesiosaur flippers, and interprets these data via comparison with AR in birds, bats and aircraft. Performance trade-offs implicit in AR variation are well-understood in the context of aircraft design, and these trade-offs have direct ecomorphological analogues in birds and bats. Knowledge of these trade-offs allows interpretation of variation in plesiosaur AR. By analogy, …


A Cluster-Based Approach For Biological Hypothesis Testing And Its Application, Ahmed Mustafa Jun 2012

A Cluster-Based Approach For Biological Hypothesis Testing And Its Application, Ahmed Mustafa

Ahmed Mustafa Dr.

No abstract provided.


What Can We Learn From Confusing Olivella Columellaris And O. Semistriata, Two Key Species In Panamic Sandy Beach Ecosystems?, Alison Troost, Samantha Rupert, Ariel Cyrus, Frank Paladino, Benjamin Dattilo, Winfried Peters Jun 2012

What Can We Learn From Confusing Olivella Columellaris And O. Semistriata, Two Key Species In Panamic Sandy Beach Ecosystems?, Alison Troost, Samantha Rupert, Ariel Cyrus, Frank Paladino, Benjamin Dattilo, Winfried Peters

Winfried S. Peters

Olivella columellaris (Sowerby 1825) and O. semistriata (Gray 1839) are suspension feeding, swash surfing snails on tropical sandy beaches of the east Pacific. While they often are the numerically dominant macrofaunal element in their habitats, their biology is poorly understood; the two species actually have been confused in all of the few publications that address their ecology. Frequent misidentifications in publications and collections contributed also to an overestimation of the geographic overlap of the two species. To provide a sound taxonomic basis for further functional, ecological, and evolutionary investigations, we evaluated the validity of diagnostic traits in wild populations and …


Report On Sanitary Shoreline Survey Within The Tanbi Wetlands National Park And Other Shellfish Harvesting Communities, The Gambia May 2012

Report On Sanitary Shoreline Survey Within The Tanbi Wetlands National Park And Other Shellfish Harvesting Communities, The Gambia

Michael A Rice

Emphasis is placed on the sanitary control of shellfish because of the direct relationship between pollution of shellfish growing areas and the transmission of diseases to humans. Shellfish borne infectious diseases are generally transmitted via a fecal - oral route. To accurately assess waters for shellfish harvesting, an evaluation of the pollution sources that are likely to affect the area is required by the NSSP. The shoreline survey is conducted of the shellfish growing area shoreline and estuary to locate pollution sources that could have an effect on the water quality of the area. The shoreline survey team visited 15 …


Enumeration Of Sandy Sediment Bacteria: Search For Optimal Protocol, Slava Epstein, Jeffrey Rossel May 2012

Enumeration Of Sandy Sediment Bacteria: Search For Optimal Protocol, Slava Epstein, Jeffrey Rossel

Slava Epstein

We examined and compared a variety of existing protocols for enumeration of bacteria from marine sandy sediments. The focus was on how to dislodge bacteria from sediment particles; a commercial blender, an ultrasonic cleaner, and an ultrasonic cell disrupter were tested. The ultrasonic cell disrupter was found to be the most efficient device for bacterial dislodgment. With a 5 mm microtip vibrating at 109 μm amplitude and 20 kHz, the optimal sonication time of small (≤ 0.5 cm³) samples was 180 s. Having identified the optimal dislodgment treatment, we went through other steps of sediment bacteria enumeration (use of surfactants, …


Enumeration Of Sandy Sediment Bacteria: Are The Counts Quantitative Or Relative?, Slava S. Epstein, D. Alexander, K. Cosman, A. Dompé, S. Gallagher, J. Jarsobski, E. Laning, R. Martinez, G. Panasik, C. Peluso, R. Runde, E. Timmer May 2012

Enumeration Of Sandy Sediment Bacteria: Are The Counts Quantitative Or Relative?, Slava S. Epstein, D. Alexander, K. Cosman, A. Dompé, S. Gallagher, J. Jarsobski, E. Laning, R. Martinez, G. Panasik, C. Peluso, R. Runde, E. Timmer

Slava Epstein

Several tests were carried out to enable evaluation of the precision with which sandy sediment bacteria could be enumerated. This represented the first attempt to place direct epifluorescence counts of benthic bacteria on a quantitative, rather than relative, ground. The tests combined in situ radioisotope ([³H], [¹⁴C]) labeling of sediment bacteria, bacterial dislodgment by ultrasonic treatment, and bacterial enumeration via fluorescent staining. The results provided direct and indirect evidence that the employed protocol for bacterial enumeration accounted for 88 to 98% of all bacteria present in sediments. The identified approach thus allowed for a rather complete quantification of sediment bacteria. …


New Cultivation Strategies Bring More Microbial Plankton Species Into The Laboratory, Stephen J. Giovannoni, Rachel A. Foster, Michael S. Rappé, Slava S. Epstein May 2012

New Cultivation Strategies Bring More Microbial Plankton Species Into The Laboratory, Stephen J. Giovannoni, Rachel A. Foster, Michael S. Rappé, Slava S. Epstein

Slava Epstein

No abstract provided.


Essay, Benjamin Negrete, Megan Nepshinsky, Alexa Kretsch Apr 2012

Essay, Benjamin Negrete, Megan Nepshinsky, Alexa Kretsch

Benjamin Negrete Jr.

No abstract provided.


Big Blue And You Abstract, Benjamin Negrete, Megan Nepshinsky, Alexa Kretsch Apr 2012

Big Blue And You Abstract, Benjamin Negrete, Megan Nepshinsky, Alexa Kretsch

Benjamin Negrete Jr.

No abstract provided.


Comparing Volunteer And Professionally Collected Monitoring Data From The Rocky Subtidal Reefs Of Southern California, Usa, David Gillett, Daniel Pondella, Jan Freiwald, Kenneth Schiff, Jennifer Caselle, Craig Shuman, Stephen Weisberg Apr 2012

Comparing Volunteer And Professionally Collected Monitoring Data From The Rocky Subtidal Reefs Of Southern California, Usa, David Gillett, Daniel Pondella, Jan Freiwald, Kenneth Schiff, Jennifer Caselle, Craig Shuman, Stephen Weisberg

Daniel Pondella

Volunteer-based citizen monitoring has increasingly become part of the natural resources monitoring framework, but it is often unclear whether the data quality from these programs is sufficient for integration with traditional efforts conducted by professional scientists. At present, the biological and physical characteristics of California’s rocky reef kelp forests are concurrently monitored by two such groups, using similar methodologies—underwater visual census (UVC) of fish, benthic invertebrates, and reef habitat, though the volunteer group limits their sampling to transects close to the reef surface and they use a more constrained list of species for enumeration and measurement. Here, we compared the …


The Behavioural And Sensory Ecology Of Agaronia Propatula (Caenogastropoda, Olividae), A Swash-Surfing Predator On Sandy Beaches Of The Panamic Faunal Province, Ariel Cyrus, Samantha Rupert, Amy Silva, Monika Graf, Jeremy Rappaport, Frank Paladino, Winfried Peters Mar 2012

The Behavioural And Sensory Ecology Of Agaronia Propatula (Caenogastropoda, Olividae), A Swash-Surfing Predator On Sandy Beaches Of The Panamic Faunal Province, Ariel Cyrus, Samantha Rupert, Amy Silva, Monika Graf, Jeremy Rappaport, Frank Paladino, Winfried Peters

Winfried S. Peters

The genus Agaronia includes dominant predators in the eulittoral zone of dissipative sandy beaches of the tropical Eastern Pacific, which show specific adaptations to this environment such as swash-surfing locomotion. We studied A. propatula in its natural habitat in El Salvador and Costa Rica, and performed field experiments to obtain insights into its ecology, behaviour and sensory physiology. Agaronia propatula is not attracted by carrion and preys mostly on the ubiquitous beach snail Olivella semistriata. This, however, reflects community composition rather than prey specialization; A. propatula is an investigative hunter and will, quite literally, attack everything that moves (with …


Environmental Issues For The Twenty-First Century And Their Impact On Human Health, Richard Philp Feb 2012

Environmental Issues For The Twenty-First Century And Their Impact On Human Health, Richard Philp

Richard B. Philp

This e-book documents environmental hazards from disasters such as the Gulf oil spill, from pollution resulting from resource exploitation, from contamination of the marine environment and from climate change including the role of human source greenhouse gases. Pollution from the electronic industry is a recent and serious threat to human and environmental health. The final chapter offers some means of preventing or reversing these hazards. Now available on Amazon


An Empirical Algorithm For Light Absorption By Ocean Water Based On Color, Zhongping Lee, Kendall L. Carder, R. G. Steward, T. G. Peacock, C. O. Davis, J. S. Patch Feb 2012

An Empirical Algorithm For Light Absorption By Ocean Water Based On Color, Zhongping Lee, Kendall L. Carder, R. G. Steward, T. G. Peacock, C. O. Davis, J. S. Patch

ZhongPing Lee

Empirical algorithms for the total absorption coefficient and absorption coefficient by pigments for surface waters at 440 nm were developed by applying a quadratic formula that combines two spectral ratios of remote-sensing reflectance. For total absorption coefficients ranging from 0.02 to 2.0 m(-1), a goodness of fit was achieved between the measured and modeled data with a root-mean-square difference between the measured and modeled values for log10 scale (RMSDlog10) of 0.062 (15.3% for linear scale, number of samples N = 63), while RMSDlog10 is 0.111 (29.1% for linear scale, N = 126) for pigment absorption (ranging from 0.01 to 1.0 …


Moderate Resolution Imaging Spectroradiometer (Modis) Observations Of Cyanobacteria Blooms In Taihu Lake, China, Chuanmin Hu, Zhongping Lee, Ronghua Ma, Kun Yu, Daqiu Li, Shaoling Shang Feb 2012

Moderate Resolution Imaging Spectroradiometer (Modis) Observations Of Cyanobacteria Blooms In Taihu Lake, China, Chuanmin Hu, Zhongping Lee, Ronghua Ma, Kun Yu, Daqiu Li, Shaoling Shang

ZhongPing Lee

A novel approach was used with data from the Moderate Resolution Imaging Spectroradiometer (MODIS) to characterize the intense blooms of cyanobacteria (primarily Microcystis aeruginosa) in Taihu Lake, China's third largest freshwater lake. The approach involves first deriving a floating algae index (FAI) based on the medium-resolution (250 and 500 m) MODIS reflectance data at 645, 859, and 1240 nm after correction of the ozone/gaseous absorption and Rayleigh scattering effects and then objectively determining the FAI threshold value (-0.004) to separate the bloom and nonbloom waters. by definition, the term "bloom" or "floating algae" refers to bloom where cyanobacteria form floating …


Properties Of The Water Column And Bottom Derived From Airborne Visible Infrared Imaging Spectrometer (Aviris) Data, Zhongping Lee, Kendall L. Carder, Robert F. Chen, Thomas G. Peacock Feb 2012

Properties Of The Water Column And Bottom Derived From Airborne Visible Infrared Imaging Spectrometer (Aviris) Data, Zhongping Lee, Kendall L. Carder, Robert F. Chen, Thomas G. Peacock

ZhongPing Lee

Using Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data as an example, we show in this study that the properties of the water column and bottom of a large, shallow area can be adequately retrieved using a model-driven optimization technique. The simultaneously derived properties include bottom depth, bottom albedo, and water absorption and backscattering coefficients, which in turn could be used to derive concentrations of chlorophyll, dissolved organic matter, and suspended sediments in the water column. The derived bottom depths were compared with a bathymetry chart and a boat survey and were found to agree very well. Also, the derived bottom …


Time Series Of Bio-Optical Properties In A Subtropical Gyre: Implications For The Evaluation Of Interannual Trends Of Biogeochemical Properties, Zhongping Lee, Shaoling Shang, Chuanmin Hu, Marlon Lewis, Robert Arnone, Yonghong Li, Bertrand Lubac Feb 2012

Time Series Of Bio-Optical Properties In A Subtropical Gyre: Implications For The Evaluation Of Interannual Trends Of Biogeochemical Properties, Zhongping Lee, Shaoling Shang, Chuanmin Hu, Marlon Lewis, Robert Arnone, Yonghong Li, Bertrand Lubac

ZhongPing Lee

With a validated Quasi-Analytical Algorithm, an 11 year (1998-2008) monthly time series of the primary optical properties of waters in the center of the South Pacific gyre was developed from Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and Moderate Resolution Imaging Spectroradiometer (MODIS). Also derived are chlorophyll a (Chl a) concentrations with the operational empirical algorithms for SeaWiFS and MODIS. The optical properties include the absorption coefficient (at 443 nm) of phytoplankton (aph) and that of the combination of detritus and gelbstoff (adg). From these time series, we further derived their annual background (summer low) and seasonal intensity (the difference between winter …


Using Gis Mapping Of The Extent Of Nearshore Rocky Reefs To Estimate The Abundance And Reproductive Output Of Important Fishery Species, Jeremy T. Claisse, Daniel J. Pondella Ii, Jonathan P. Williams, James Sadd Jan 2012

Using Gis Mapping Of The Extent Of Nearshore Rocky Reefs To Estimate The Abundance And Reproductive Output Of Important Fishery Species, Jeremy T. Claisse, Daniel J. Pondella Ii, Jonathan P. Williams, James Sadd

Daniel Pondella

Kelp Bass (Paralabrax clathratus) and California Sheephead (Semicossyphus pulcher) are economically and ecologically valuable rocky reef fishes in southern California, making them likely indicator species for evaluating resource management actions. Multiple spatial datasets, aerial and satellite photography, underwater observations and expert judgment were used to produce a comprehensive map of nearshore natural rocky reef habitat for the Santa Monica Bay region (California, USA). It was then used to examine the relative contribution of individual reefs to a regional estimate of abundance and reproductive potential of the focal species. For the reefs surveyed for fishes (i.e. 18 …


Effects Of Capsaicin Supplemented Feed On The Growth And Immune Response Of Coho Salmon, Oncorhynchus Kisutch., Ahmed Mustafa, Paul Mccain, Devin Carr Dec 2011

Effects Of Capsaicin Supplemented Feed On The Growth And Immune Response Of Coho Salmon, Oncorhynchus Kisutch., Ahmed Mustafa, Paul Mccain, Devin Carr

Ahmed Mustafa Dr.

No abstract provided.


Effects Of Vitamin C On Expression Of Stress Genes In Tilapia, Oreochromis Niloticus., Ahmed Mustafa, Sharif Hayat, Jessica Eash Dec 2011

Effects Of Vitamin C On Expression Of Stress Genes In Tilapia, Oreochromis Niloticus., Ahmed Mustafa, Sharif Hayat, Jessica Eash

Ahmed Mustafa Dr.

No abstract provided.


Survey Of Antibiotic Resistant Bacteria In Fish Gut Collected From Selected Sites., Ahmed Mustafa, Hasina Karki, Arlis Lamaster, Bob Gillespie, Shree Dhawale Dec 2011

Survey Of Antibiotic Resistant Bacteria In Fish Gut Collected From Selected Sites., Ahmed Mustafa, Hasina Karki, Arlis Lamaster, Bob Gillespie, Shree Dhawale

Ahmed Mustafa Dr.

No abstract provided.


Effects Of Capsaicin Supplemented Feed On The Growth And Immune Response Of Tilapia, Oreochromis Niloticus, Ahmed Mustafa, Paul Mccain, Devin Carr Dec 2011

Effects Of Capsaicin Supplemented Feed On The Growth And Immune Response Of Tilapia, Oreochromis Niloticus, Ahmed Mustafa, Paul Mccain, Devin Carr

Ahmed Mustafa Dr.

No abstract provided.


Sharks Of The Devonian, Andrew Blitman Dec 2011

Sharks Of The Devonian, Andrew Blitman

Andrew Blitman

No abstract provided.


Reeling You In: Billfish In Popular Culture, Andrew Blitman Dec 2011

Reeling You In: Billfish In Popular Culture, Andrew Blitman

Andrew Blitman

No abstract provided.


Psychology (Addiction: Biology, Psychology And Society), Ahmed Mustafa, Sharon Morgillo, Shree Dhawale Dec 2011

Psychology (Addiction: Biology, Psychology And Society), Ahmed Mustafa, Sharon Morgillo, Shree Dhawale

Ahmed Mustafa Dr.

No abstract provided.