Life Sciences Commons^™

Flight Of The Freshwater Fish, Michael H. Wilson

Capstones

Michael H. Wilson

Capstone Abstract

December 27, 2016

Flight of the Freshwater Fish

The Hudson River provides for millions of people as a path for commercial and private transportation, a source of food and energy, and perhaps most importantly for many living in the tri-state area as a destination for recreation and relaxation. The most overlooked feature of the river is how the wildlife shows clear signs of a changing climate and rapid environmental response to the impacts of global warming on the river.

Entire populations of fish species in the lower Hudson have been forced to leave the river …

Sea Level Change In The Gulf Islands National Park Reserve, Southern British Columbia: Implications For The Interpretation Of Nearshore Archaeological Features, Glenda J. Wyatt

Salish Sea Ecosystem Conference

Sea level along the B.C. coastline has changed dramatically over the past 10,000 years due to isostatic rebound following deglaciation from the Fra ser Glaciation (Clague & James, 2002). In the future, sea levels globally are also predicted to rise according to the Intergovernmental Panel on Climate Change (IPCC) (2014), due to climate change. Lemmen et al. (2008), suggest that in the near future some B.C. coastal communities will have to deal with changes in shorelines due to rising sea levels, and hence erosional patterns, modifications to ecosystems and habitats, and potentially an altered marine food supply. This thesis examines …

Pacific Great Blue Heron Population Monitoring On Vancouver Island And The Surrounding Gulf Islands, Trudy A. Chatwin, Travis Heckford

Salish Sea Ecosystem Conference

The Pacific or Great Blue Heron fannini subspecies winters and breeds on Vancouver Island in locations within 5 km of the marine shoreline. Its visibility and close connection to the Salish Sea make it an important flagship species. Due to population concerns and threats associated with urban development, the Province of BC has coordinated monitoring of Great Blue Heron colonies on Vancouver Island and the adjacent Gulf Islands from 1997 through 2015. Starting in 2005, I trained volunteer stewards and technicians to use a standardized methodology to locate and assess heron colonies, count active nests, determine nest success and follow …

Development Of A Risk Assessment Framework To Predict Invasive Species Establishment For Multiple Taxonomic Groups And Vectors Of Introduction, Alisha D. Davidson, Abigail J. Fusaro, Rochelle A. Sturtevant, Edward S. Rutherford, Donna R. Kashian

Biological Sciences Faculty Research Publications

A thorough assessment of aquatic nonindigenous species’ risk facilitates successful monitoring and prevention activities. However, species- and vector-specific information is often limited and difficult to synthesize across a single risk framework. To address this need, we developed an assessment framework capable of estimating the potential for introduction, establishment, and impact by aquatic nonindigenous species from diverse spatial origins and taxonomic classification, in novel environments. Our model builds on previous approaches, while taking on a new perspective for evaluation across species, vectors and stages to overcome the limitations imposed by single species and single vector assessments. We applied this globally-relevant framework …

Identifying Groundwater - Dependent Wetlands Of The Broome Sandstone Aquifer In The La Grange Groundwater Area, Nicholas Wright, Richard J. George Dr, Robert Paul, Paul Raper

Resource management technical reports

This report identifies wetlands that are likely to be dependent on the Broome Sandstone aquifer within the La Grange groundwater allocation area. The Broome Sandstone aquifer is the dominant groundwater resource in the area. With potential agricultural growth of this area, it is necessary to understand, monitor and manage the aquifer and its dependent wetlands. This report describes how we created a watertable surface that was used to identify wetlands and to determine which of the previously mapped wetlands are likely to be sourced from the Broome Sandstone aquifer. A watertable surface was created from 148 points taken from bore …

Climate Change Impacts On Freshwater Wetland Hydrology And Vegetation Cover Cycling Along A Regional Aridity Gradient, Philip A. Fay, Glenn R. Guntenspergen, Jennifer H. Olker, W. Carter Johnson

Natural Resource Management Faculty Publications

Global mean temperature may increase up to 6°C by the end of this century and together with precipitation change may steepen regional aridity gradients. The hydrology, productivity, and ecosystem services from freshwater wetlands depend on their future water balance. We simulated the hydrology and vegetation dynamics of wetland complexes in the North American Prairie Pothole Region with the WETLANDSCAPE model. Simulations for 63 precipitation × temperature combinations spanning 6°C warming and −20% to +20% annual precipitation change at 19 locations along a mid-continental aridity gradient showed that aridity explained up to 99% of the variation in wetland stage and hydroperiod …

Presence Of The Cyanotoxin Microcystin In Arctic Lakes Of Southwestern Greenland, Jessica Trout-Haney, Zachary Wood, Kathryn Cottingham

Dartmouth Scholarship

Cyanobacteria and their toxins have received significant attention in eutrophic temperate and tropical systems where conspicuous blooms of certain planktonic taxa release toxins into fresh water, threatening its potability and safe use for recreation. Although toxigenic cyanobacteria are not confined to high nutrient environments, bloom-forming species, or planktonic taxa, these other situations are studied les often studied. For example, toxin production in picoplankton and benthic cyanobacteria—the predominant photoautotrophs found in polar lakes—is poorly understood. We quantified the occurrence of microcystin (MC, a hepatotoxic cyanotoxin) across 18 Arctic lakes in southwestern Greenland. All of the focal lakes contained detectable levels of …

Prospective Doctoral Statement For The University Of Southern California's School Of Cinematic Arts Media Arts + Practice Program, Gabriel Leiner

Gabriel Leiner

After visiting L.A. again and seeing the beautiful fountains on the University of Southern California's campus I am filled with all kinds of ideas about the future and brimming with energy. To all those at the University of Southern California's Cinematic Arts Department, thanks for reading my ideas over the past couple years and helping me to evolve and become a better person and a better writer. Starting a position as a doctoral student in the Media Arts + Practice Program in 2016 is an exciting opportunity. I've got a really positive outlook about Kiss The Water.

Biogeochemistry Of A Saline, Alkaline, Terminal Lake Ecosystem In Transition; Walker Lake, Nevada, Katherine Lynn Willever

UNLV Theses, Dissertations, Professional Papers, and Capstones

Walker Lake is a saline, alkaline, terminal lake ecosystem located in west-central Nevada. For over one hundred years, anthropogenic streamflow diversions within the Walker River Basin have ultimately led to little or no water reaching Walker Lake, the basin’s terminus for water flow. These diversions have resulted in a >46 meter decrease in the lake surface altitude and increases in salinity and dissolved salt constituents that have caused the elimination of native fish species. This study examines how the lack of freshwater inflow has altered the physical, chemical, and microbiological structure of Walker Lake during the lake’s ongoing desiccation.

Between …

Stream Microbial Communities As Potential Indicators Of River And Landscape Disturbance In North-Central Arkansas, Wilson Howard Johnson

Graduate Theses and Dissertations

In the past decade, 29 shale basins have been actively developed across 20 states for extraction of natural gas (NG) via horizontal drilling/hydraulic fracturing (=fracking). This includes ~5000 wells within the Fayetteville shale of north-central Arkansas. Development often impacts both river- and landscapes, and management requires catchment-level evaluations over time, with organismal presence/absence as indicators. For this study next-generation sequencing was used to identify/characterize microbial communities within biofilm of eight Arkansas River tributaries, so as to gauge potential catchment influences. Streams spanned a gradient of landscape features and hydrological flows, with four serving as ‘potentially impacted catchment zones’ (PICZ) and …

Flood Events Can Reduce Key Fatty Acid Content Of Early-Stage Benthic Algal Assemblages In An Urban Stream, Sarah Whorley, John Wehr

Articles & Book Chapters

Effects of urbanization on stream chemistry and biota have been widely examined. However, few studies quantify the effect of urban stream characteristics on the biochemical properties of basal food resources, such as benthic algae, which can affect aquatic consumers and food webs. A common feature of urban streams is the high frequency of short floods, which may disrupt aquatic communities and their biotic controls. These disturbances can create algal assemblages low in biomass and which remain in early successional stages. This study examined the effects of frequent flood events and macroinvertebrate grazing on biomass, elemental stoichiometry, and essential fatty acid …

The Selective Survival Of Escherichia Coli In Freshwater Beach Sand, Natalie Ann Rumball

Theses and Dissertations

The quantification of Escherichia coli or E. coli is the most common method used to detect recent fecal pollution in recreational water, as this species is known for its high abundance in fecal matter and assumed host-associated nature. However, it has been determined that some strains are capable of long-term survival and potential propagation in non-host environments, such as the beach sand. These long-term environmental survivors are host-independent and are not associated with the same health risks as those E. coli from recent fecal pollution. However, they have been shown to impact how water quality is perceived as they are …

Cockatoo Sands In The Victoria Highway And Carlton Hill Areas, East Kimberley: Hydrogeology, Aquifer Properties And Groundwater Chemistry, D L. Bennett, John Andrew Simons, Richard J. George Dr, Paul Raper

Resource management technical reports

Cockatoo Sands are recognised as potentially suitable for irrigated agriculture because they are generally well drained and not subject to waterlogging or inundation. These characteristics allow them to be cultivated and prepared for planting various crops during the wet and dry seasons of northern Australia. Expanding agricultural production onto the Cockatoo Sands around Kununurra will increase opportunities for agriculture by increasing the overall scale of agriculture, allowing year-round agricultural enterprise, new crops and new market opportunities.

DAFWA has assessed the soil characteristics and agriculturally suitable areas of Cockatoo Sands in the Victoria Highway and Carlton Hill areas near Kununurra. Potential …

Dietary Effects On The Stoichiometry Of Growth, Regulation, And Wastes Of Ozark Stream Insect Detritivores, Halvor Matthew Halvorson

Graduate Theses and Dissertations

A widespread stressor, anthropogenic nitrogen (N) and phosphorus (P) pollution can increase resource nutrient content and alter animal community composition in freshwater ecosystems. In this dissertation, I used ecological stoichiometry theory to examine effects of diet nutrient content and leaf litter type on growth, regulation, and wastes of aquatic invertebrate detritivores. I tested effects of leaf litter diet carbon:phosphorus (C:P) on growth and stoichiometric regulation of the detritivorous caddisfly Pycnopsyche lepida and used results to determine a threshold elemental ratio of oak litter C:P=1620 that confers peak growth of this species. This empirical, growth-based approach provided a more accurate estimate …

The Role Of Hydrologic Regimes In Driving Morphologic Divergence And The Trait Compositions Of Fish Assemblages, Lindsey A. Bruckerhoff

Graduate Theses and Dissertations

The hydrologic regime is an important determinant of the ecological integrity of a stream. Hydrologic regimes are defined by the magnitude, timing, frequency, rate of change, and duration of high and low flow events and capture long term patterns of variability and predictability of water movement in a stream. Flow regimes influence many aspects of the biophysical environment in lotic systems; therefore organisms have adapted to natural flow patterns. We investigated how fish have adapted to flow regimes at both a population and community level. In the first study presented in this thesis, we hypothesized fish exhibit phenotypic divergence to …

Juvenile Survival And Adult Return As A Function Of Freshwater Rearing Life History For Coho Salmon In The Klamath River Basin, Molly Gorman

Cal Poly Humboldt theses and projects

The Scott and Shasta rivers, Klamath River tributaries, experience spatial disparity in habitat quality in spring and summer as a result of historical and current land-use. Juvenile Coho Salmon (Oncorhynchus kisutch) born in the upper tributary reaches often rear in natal streams before migrating to sea. However, those born in the lower reaches often encounter unsuitable habitat and emigrate during their first spring to seek non-natal rearing habitats. It is assumed that these early outmigrants are population losses. This study evaluated first-summer survival, and contribution to the adult population, of non-natal rearing juveniles in the Klamath River Basin. …

Assessment Of Nutrient, Metal, And Organic Contaminant Concentrations In Eelgrass (Zostera Marina L.) In Puget Sound, Wa (Usa), Jeff Gaeckle

Salish Sea Ecosystem Conference

Eelgrass (Zostera marina L.), the dominant seagrass in the Pacific Northwest region, is an ecologically important component of the marine nearshore throughout greater Puget Sound, WA. Eelgrass and other seagrasses are known to provide extensive ecosystem services worldwide, but are under threat from a suite of anthropogenic stressors, notably nutrient and sediment loading associated with coastal development and population growth. Loading sources span from atmospheric deposition to thousands of outfalls that range from small manmade or natural drainages to the largest permitted facilities in the country. Research has demonstrated seagrasses uptake nutrients, metals and organic contaminants with varied physiological …

Armoring On Puget Sound: Progress Towards A Better Baseline, Hugh Shipman, Jennifer Burke, Randy E. Carman, Kurt L. Fresh

Salish Sea Ecosystem Conference

The construction of seawalls and similar structures along Puget Sound’s shoreline impacts geomorphic processes and ecological functions. The extent of shoreline armor has been adopted by the Puget Sound Partnership as a vital sign indicator, is used by local, state, and federal groups as a measure of ecosystem function, and has been employed as a tool for prioritizing restoration actions.

As a result, we recognized the importance of accurately characterizing the extent, character, and distribution of shoreline armor. The objectives of our project were to review existing data sources, assess methodologies, identify gaps in data quality or coverage, and to …

The Conflict Resolution Case Study In Urban Life: Bull Run Watershed Case, Chang-Yu Hong

Geography Faculty Publications and Presentations

The City of Portland and the United States Department of Agriculture (USDA) Forest Service are working together, along with citizens, to formulate a comprehensive new policy to guide joint management of the Bull Run watershed at Mt. Hood National Forest. This process has brought about four decades of conflict, resulting from differences between the federal view of multiple use and the local view of exclusive use for producing high quality water. The new policy is being formulated by the City of Portland and the Forest Service through negotiation of a comprehensive Memorandum of Understanding that structures the parties’ roles, responsibilities, …

Patterns Of Abundance And Community Dynamics In Atlantic Coastal Sharks, Cassidy Peterson

Dissertations, Theses, and Masters Projects

No abstract provided.

Environmentally Sound Energy For The Future, Genevra E L Harker-Klimes

Salish Sea Ecosystem Conference

One of the growing industries in coastal and ocean waters is marine renewable energy. To date, there have been very few deployments in US waters, but the Pacific Northwest National Laboratory’s Marine Sciences Laboratory is conducting research into the environmental impacts of such developments in order to enable the industry to grow. At one time, there were nine tidal projects being investigated within Puget Sound, and none of these has been taken forward. There were several reasons why these projects did not progress but one of the key factors was the cost of the environmental studies. Consequently, there is a …

From The Ivory Tower Through The Black Box: Engaging Effectively With Government To Turn Ideas Into Action, Gabriel Mastico

Salish Sea Ecosystem Conference

When researchers, communities, and/or environmental organizations propose new approaches to address ecological challenges, responsibility for implementing them often falls (in part) to practitioners working within government. Government employees face considerable challenges in synthesizing the available knowledge to support a recommendation for decision-makers to adopt a new approach. This presentation draws on an insider’s experience to help conservation researchers and practitioners understand the key challenges and opportunities that government employees face in navigating their organizations’ decision-making processes. It also suggests best practices to help proponents of new approaches frame conservation finance ideas in ways that resonate with local governments and their …

Mapping On The Edge: Shoreline Mapping For Regulation And Voluntary Stewardship, Kate E. Emmings

Salish Sea Ecosystem Conference

Nothing generates conversations between landowners and local government like a map! Shoreline mapping is a crucial decision making tool for local governments and regulators. It provides information about appropriate location of shoreline infrastructure, such as docks, and informs landowners about the location of important natural transition areas between the land and the sea. Maps can also provide information that limits the activities of private landowners and as such can cause community conflict if they are inaccurate or unclear. Because mapping can be used to inform regulation, local governments often have different needs than scientists and NGOs, but there is no …

Studies On Hydroxyl Radical Formation And Correlated Photoflocculation Process Using Degraded Wood Leachate As A Cdom Source, Luni Sun, Kenneth Mopper

Chemistry & Biochemistry Faculty Publications

In this study, we examined hydroxyl radical (•OH) formation with respect to photoreactivity of colored dissolved organic matter (CDOM), the Fenton reaction, and photoflocculation using leachate from decaying wood. The relationship between •OH photoproduction rate and leachate optical properties (UV-visible absorption and fluorescence excitation-emission matrices (EEMS)) was studied during irradiation using a UV solar simulator. The results showed that the •OH photochemical formation rate is strongly related to humic-like fluorescence as characterized by parallel factor analysis (PARAFAC), and that these fluorescence components are more photolabile than most of the other CDOM components. Fourier transform infrared spectroscopy (FT-IR) indicated the photodegradation …

Assessing Habitat Compensation In The Lower Fraser River And Estuary, Megan A. Lievesley, Dan Stewart, Brad Mason, Rob Knight

Salish Sea Ecosystem Conference

Over the last century, wetland ecosystems along the Lower Fraser River (LFR) have been heavily impacted by foreshore development and industry. Wetlands along the LFR provide important ecosystem services and habitat for wildlife such as rearing grounds for fish and staging grounds for migratory birds. For 30 years, habitat compensation has been the accepted method for offsetting habitat degradation; however, due to a lack of follow-up research and consistent baseline data it is yet to be determined if compensation projects truly replicate habitat lost. This project, funded by the National Wetland Conservation Fund, aims to (1) review, assess, and determine …

Holding The Line, To Let Shorelines Move Naturally, Kyle Loring

Salish Sea Ecosystem Conference

This poster will identify mechanisms for limiting the impacts of residential development on the natural functions of marine shorelines.

First, it will share the results from two recent legal cases that successfully prevented the unnecessary bulkheading of a documented surf smelt spawning beach on San Juan Island. Friends of the San Juans appealed two local permit approvals to the Shoreline Hearings Board. The local permits authorized two-tiered armoring that extended nearly 20 total feet in height and would have removed most of the vegetation that shaded the beaches and supplied insects for juvenile Chinook salmon in an area identified as …

Telling Stories: Designing Effective Data Visualization And Climate Change Communication Tools, Ilon E. Logan, Carol Macilroy

Salish Sea Ecosystem Conference

As a scientific community, our understanding of the potential effects of a changing climate has increased dramatically over the past decade. We are integrating multiple models with increasing sophistication and projecting impacts at the local scale. But the results of our scientific data and analysis are only as good as their presentation to the public and other decision-makers. Telling the stories of our work using technology and thoughtful, accurate, and visually compelling graphics is paramount in today’s information-rich environment. MacIlroy Consulting, Inc. and Environmental Science Associates (ESA) collaborated to develop data visualization and communication tools for the Skagit Climate Science …

Developing Locally-Driven (Shoreline) Monitoring Programs In The Salish Sea (And Beyond), David Sale

Salish Sea Ecosystem Conference

During the development of the Bainbridge Island Shoreline Monitoring Program (SMP), a volunteer group of scientists and engineers (Bainbridge Island Environmental Technical Advisory (ETAC)), provided the City of Bainbridge Island (COBI) City Council and staff with advice and recommendations on relevant shoreline science and the SMP. One of the recommendations was for COBI to adopt and initiate a locally–driven and -managed monitoring program to address both the effectiveness of the SMP over time, and uncertainties in knowledge of specific Bainbridge Island shoreline drivers and processes. The program would be designed to integrate past and current studies by COBI and other …

Pacific Region Contaminants Atlas, Rob Knight, Chris Garrett, Peter Ross, Brad Mason

Salish Sea Ecosystem Conference

The Pacific Region Contaminants Atlas (PRCA) is an online resource created to explore environmental contaminants topics in British Columbia, Canada. The industrialized and urbanized Georgia Basin, situated in the southwestern corner of British Columbia, is one of the key areas of concern and is the current focus of this Atlas.

Information sharing is crucial to effective decision-making by stakeholders. This web atlas provides access to scientific and technical information to support such decision-making and presents information on successes, future needs, and continuing concerns with respect to contaminants in the Georgia Basin.

In addition, the Atlas includes a Kids’ Page, an …

Protecting Puget Sound From Csos By Retrofitting Urban Neighborhoods With Green Stormwater Infrastructure, Kathryn Gwilym Pe, John Phillips, Steve Burke Pe, Peg Staeheli Fasla

Salish Sea Ecosystem Conference

In 2009 King County Wastewater Treatment Division (KCWTD) selected green stormwater infrastructure (GSI) as the preferred alternative for controlling combined sewer overflows (CSO) for the 1100-acre Barton combined sewer system (CSS) basin in Seattle. In 2008 KCWTD reported that the basin had an average of four overflows per year that discharge a total of four million gallons into Puget Sound. In order to reduce the overflows to no more than one CSO event per year for Washington State’s Department of Ecology compliance, KCWTD retrofitted 15 residential streets with bioretention cells in order to intercept, treat and reduce the amount of …