Life Sciences Commons^™

High Marker Density Gwas Provides Novel Insights Into The Genomic Architecture Of Terpene Oil Yield In Eucalyptus, David Kainer, Amanda Padovan, Joerg Degenhardt, Sandra Krause, Produyut Mondal, William Foley, Carsten Külheim

College of Forest Resources and Environmental Science Publications

Terpenoid based essential oils are economically important commodities, yet beyond their biosynthetic pathways, little is known about the genetic architecture of terpene oil yield from plants. Transport, storage, evaporative loss, transcriptional regulation and precursor competition may be important contributors to this complex trait.

Here, we associate 2.39 M single nucleotide polymorphisms derived from shallow whole genome sequencing of 468 Eucalyptus polybractea individuals with 12 traits related to the overall terpene yield, eight direct measures of terpene concentration and four biomass‐related traits.

Our results show that in addition to terpene biosynthesis, development of secretory cavities where terpenes are both synthesised and …

Mapping Mountain Peatlands And Wet Meadows Using Multi-Date, Multi-Sensor Remote Sensing In The Cordillera Blanca, Peru, Rodney Chimner, Laura Bourgeau-Chavez, Sarah L. Grelik, John A. Hribljan, Ana Maria Planas Clarke, Molly Polk, Erik Lilleskov, Beatriz Fuentealba

College of Forest Resources and Environmental Science Publications

Wetlands (called bofedales in the Andes of Peru) are abundant and important components of many mountain ecosystems across the globe. They provide many benefits including water storage, high quality habitat, pasture, nutrient sinks and transformations, and carbon storage. The remote and rugged setting of mountain wetlands creates challenges for mapping, typically leading to misclassification and underestimates of wetland extent. We used multi-date, multi-sensor radar and optical imagery (Landsat TM/PALSAR/RADARSAT-1/SRTM DEM-TPI) combined with ground truthing for mapping wetlands in Huascarán National Park, Peru. We mapped bofedales into major wetland types: 1) cushion plant peatlands, 2) cushion plant wet meadows, and 3) …

A Novel Approach To Understanding Bird Communities Using Informed Diversity Estimates At Local And Regional Scales In Northern California And Southern Oregon, Jared D. Wolfe, John D. Alexander, Jamie L. Stephens, C. John Ralph

College of Forest Resources and Environmental Science Publications

Assessment and preservation of biodiversity has been a central theme of conservation biology since the discipline's inception. However, when diversity estimates are based purely on measures of presence–absence, or even abundance, they do not directly assess in what way focal habitats support the life history needs of individual species making up biological communities. Here, we move beyond naïve measures of occurrence and introduce the concept of “informed diversity” indices which scale estimates of avian species richness and community assemblage by two critical phases of their life cycle: breeding and molt. We tested the validity of the “informed diversity” concept using …

Linking Tree Growth Rate, Damage Repair, And Susceptibility To A Genus-Specific Pest Infestation, Kayla Boyes, Kathryn G. Hietala-Henschell, Alexander P. Barton, Andrew J. Storer, Jordan M. Marshall

College of Forest Resources and Environmental Science Publications

Pest preference and subsequent susceptibility of a host individual is likely related to previous growth patterns in that host. Emerald ash borer (Agrilus planipennis Fairmaire) is a pestiferous beetle introduced to North America from Asia. While all species of ash are susceptible to attack, some individual trees appear to survive infestation. We selected ash trees in southeastern Michigan, collected cores and categorized trees as high tolerance to emerald ash borer attack (high overall health, low crown dieback), low tolerance (low overall health, high crown dieback) and intermediate tolerance (in-between the other categories). We artificially wounded trees and measured wound …

On The Shoulders Of Giants: Continuing The Legacy Of Large-Scale Ecosystem Manipulation Experiments In Puerto Rico, Tana E. Wood, Grizelle González, Whendee L. Silver, Sasha C. Reed, Molly A. Cavaleri

College of Forest Resources and Environmental Science Publications

There is a long history of experimental research in the Luquillo Experimental Forest in Puerto Rico. These experiments have addressed questions about biotic thresholds, assessed why communities vary along natural gradients, and have explored forest responses to a range of both anthropogenic and non-anthropogenic disturbances. Combined, these studies cover many of the major disturbances that affect tropical forests around the world and span a wide range of topics, including the effects of forest thinning, ionizing radiation, hurricane disturbance, nitrogen deposition, drought, and global warming. These invaluable studies have greatly enhanced our understanding of tropical forest function under different disturbance regimes …

Adaptation Strategies And Approaches For Forested Watersheds, P. Danielle Shannon, Christopher Swanston, Maria Janowiak, Stephen D. Handler, Kristen M. Schmitt, Leslie A. Brandt, Patricia Butler-Leopold

College of Forest Resources and Environmental Science Publications

Intentional climate adaptation planning for ecosystems has become a necessary part of the job for natural resource managers and natural resource professionals in this era of non-stationarity. One of the major challenges in adapting ecosystems to climate change is in the translation of broad adaptation concepts to specific, tangible actions. Addressing management goals and values while considering the long-term risks associated with local climate change can make forested watershed management plans more robust to uncertainty and changing conditions. We provide a menu of tiered adaptation strategies, which we developed with a focus on forests of the Midwest and Northeastern U.S., …

Iron (Oxyhydr)Oxides Serve As Phosphate Traps In Tundra And Boreal Peat Soils, Elizabeth M. Herndon, Lauren Kinsman-Costello, Kiersten A. Duroe, Jonathan Mills, Evan Kane, Stephen D. Sebestyen, Aaron A. Thompson, Stan D. Wullschleger

College of Forest Resources and Environmental Science Publications

Arctic and boreal ecosystems are experiencing pronounced warming that is accelerating decomposition of soil organic matter and releasing greenhouse gases to the atmosphere. Future carbon storage in these ecosystems depends on the balance between microbial decomposition and primary production, both of which can be regulated by nutrients such as phosphorus. Phosphorus cycling in tundra and boreal regions is often assumed to occur through biological pathways with little interaction with soil minerals; that is, phosphate released from organic molecules is rapidly assimilated by plants or microorganisms. In contrast to this prevailing conceptual model, we use sequential extractions and spectroscopic techniques to …

Experimental Evidence For Selection Against Hybrids Between Two Interfertile Red Oak Species, Oliver Gailing, Ruhua Zhang

College of Forest Resources and Environmental Science Publications

Reproductive isolation between related oak species within one taxonomic section is incomplete. Even though pre- and post-zygotic isolation mechanisms have been described for interfertile oak species, natural hybridization is common in contact zones between related oaks. The apparent restriction of inter-specific hybrids between ecologically divergent species to intermediate environments in contact zones suggests postzygotic isolation via environmental selection against hybrids in parental environments. Overrepresentation of hybrids in seeds as compared to adult trees provides additional indirect evidence for selection against hybrids. Here, we used genetic assignment analyses in progeny obtained from a sympatric stand of Quercus rubra and Quercus ellipsoidalis, …

Within-Canopy Experimental Leaf Warming Induces Photosynthetic Decline Instead Of Acclimation In Two Northern Hardwood Species, Kelsey R. Carter, Molly A. Cavaleri

College of Forest Resources and Environmental Science Publications

Northern hardwood forests are experiencing higher temperatures and more extreme heat waves, potentially altering plant physiological processes. We implemented in-situ leaf-level warming along a vertical gradient within a mature forest canopy to investigate photosynthetic acclimation potential of two northern hardwood species, Acer saccharum and Tilia americana. After 7 days of +3°C warming, photosynthetic acclimation was assessed by measuring differences between heated and control photosynthetic rates (A_opt) at leaf optimum temperatures (T_opt). We also measured the effects of warming and height on maximum rates of Rubisco carboxylation, stomatal conductance, transpiration, and leaf traits: leaf …

Gene Network Analysis Of Poplar Root Transcriptome In Response To Drought Stress Identifies A Ptajaz3ptarap2.6-Centered Hierarchical Network, Madhumita Dash, Yordan S. Yordanov, Tatyana Georgieva, Hairong Wei, Victor Busov

College of Forest Resources and Environmental Science Publications

Using time-series transcriptomic data from poplar roots undergoing polyethylene glycol (PEG)-induced drought stress, we built a genetic network model of the involved putative molecular responses. We found that the network resembled a hierarchical structure. The highest hierarchical level in this structure is occupied by 9 genes, which we called superhubs because they were primarily connected to 18 hub genes, which are then connected to 2,934 terminal genes. We were only able to regenerate transgenic plants overexpressing two of the superhubs, suggesting that the majority of the superhubs might interfere with the regeneration process and did not allow recovery of transgenic …

Nondestructive Assessment Of Wood Members In A Viewing Tower In Potawatomi State Park, Door County, Wisconsin, Us, Robert Ross, Xiping Wang, C. Adam Senalik

College of Forest Resources and Environmental Science Publications

The State of Wisconsin’s Department of Natural Resources is responsible for operating one of the largest state park systems in the United States. Potawatomi State Park, located on the Door County peninsula, consists of about 1,200 acres of flat to gently rolling upland terrain bordered by steep slopes and rugged limestone cliffs along Lake Michigan’s shoreline. A 75-ft observation tower sits atop a 150-ft bluff overlooking Lake Michigan. The USDA Forest Service, Forest Products Laboratory, was asked to conduct an assessment of the main support timbers of the tower. This report summarizes the results obtained from the inspection and assessment. …

The Hydrologic Role Of Urban Green Space In Mitigating Flooding (Luohe, China), Tian Bai, Audrey L. Mayer, William D. Shuster, Guohang Tian

College of Forest Resources and Environmental Science Publications

Even if urban catchments are adequately drained by sewer infrastructures, flooding hotspots develop where ongoing development and poor coordination among utilities conspire with land use and land cover, drainage, and rainfall. We combined spatially explicit land use/land cover data from Luohe City (central China) with soil hydrology (as measured, green space hydraulic conductivity), topography, and observed chronic flooding to analyze the relationships between spatial patterns in pervious surface and flooding. When compared to spatial–structural metrics of land use/cover where flooding was commonly observed, we found that some areas expected to remain dry (given soil and elevation characteristics) still experienced localized …

Mid-Atlantic Forest Ecosystem Vulnerability Assessment And Synthesis: A Report From The Mid-Atlantic Climate Change Response Framework Project, Patricia Leopold, Louis Iverson, Frank R. Thompson Iii, Leslie A. Brandt, Stephen D. Handler, Danielle Shannon, Matt Kelly, Et. Al.

College of Forest Resources and Environmental Science Publications

Forest ecosystems will be affected directly and indirectly by a changing climate over the 21st century. This assessment evaluates the vulnerability of 11 forest ecosystems in the Mid-Atlantic region (Pennsylvania, New Jersey, Delaware, eastern Maryland, and southern New York) under a range of future climates. We synthesized and summarized information on the contemporary landscape, provided information on past climate trends, and described a range of projected future climates. This information was used to parameterize and run multiple forest impact models, which provided a range of potential tree responses to climate. Finally, we brought these results before two multidisciplinary panels of …

Critical Review Of The Millennium Project In Nepal, Ashma Vaidya, Audrey L. Mayer

College of Forest Resources and Environmental Science Publications

“Our Common Future” harmonized development policies around a new sustainable development (SD) paradigm, and experts also emphasize the importance of a democratic and equitable approach to define and achieve sustainable development. However, SD targets and indicators are often defined by a suite of experts or a few stakeholder groups, far removed from on-the-ground conditions. The most common expert-led development framework, the United Nations’ Millennium Development Goals (MDGs), promoted one set of targets and indicators for all developing countries. While progress towards these targets was routinely reported at the national scale, these targets may not reflect context-specific sustainable development. We evaluated …

Failure To Communicate: Inefficiencies In Voluntary Incentive Programs For Private Forest Owners In Michigan, Mark. D. Rouleau, Jennifer F. Lind-Riehl, Miranda N. Smith, Audrey L. Mayer

College of Forest Resources and Environmental Science Publications

Coordinating forest management across thousands of nonindustrial private forest (NIPF) owners is a difficult yet necessary task for state land management agencies. Voluntary Incentive Programs (VIPs) can coordinate the decentralized activities of these owners in return for services or financial incentives. However, many VIPs typically have low enrollment. Our study investigates the implementation of VIPs to increase forest management coordination among NIPFs in Michigan. We present findings from 20 semi-structured interviews with leaders of state and local land management organizations, and government officials at state natural resource agencies, and contrast their answers with those recorded from 37 interviews of NIPF …

Using An Obcd Approach And Landsat Tm Data To Detect Harvesting On Nonindustrial Private Property In Upper Michigan, Riccardo Tortini, Audrey L. Mayer, Pieralberto Maianti

College of Forest Resources and Environmental Science Publications

Forest dynamics influence climate, biodiversity, and livelihoods at multiple scales, yet current resource policy addressing these dynamics is ineffective without reliable land use land cover change data. The collective impact of harvest decisions by many small forest owners can be substantial at the landscape scale, yet monitoring harvests and regrowth in these forests is challenging. Remote sensing is an obvious route to detect and monitor small-scale land use dynamics over large areas. Using an annual series of Landsat-5 Thematic Mapper (TM) images and a GIS shapefile of property boundaries, we identified units where harvests occurred from 2005 to 2011 using …

Information And Entropy Theory For The Sustainability Of Coupled Human And Natural Systems, Audrey L. Mayer, Richard P. Donovan, Christopher W. Pawlowski

College of Forest Resources and Environmental Science Publications

For coupled human and natural systems (CHANS), sustainability can be defined operationally as a feasible, desirable set of flows (material, currency, information, energy, individuals, etc.) that can be maintained despite internal changes and changes in the environment. Sustainable development can be defined as the process by which CHANS can be moved toward sustainability. Specific indicators that give insight into the structure and behavior of feedbacks in CHANS are of particular interest because they would aid in the sustainable management of these systems through an understanding of the structures that govern system behavior. However, the use of specific feedbacks as monitoring …

Forestsim Model Of Impacts Of Smallholder Dynamics: Forested Landscapes Of The Upper Peninsula Of Michigan, Audrey L. Mayer, Mark Rouleau

College of Forest Resources and Environmental Science Publications

Many forested landscapes in the United States contain a large number of small private landowners (smallholders). The individual decisions of these smallholders can collectively have a large impact on the structure, composition, and connectivity of forests. While models have been developed to try to understand this large-scale collective impact, few models have incorporated extensive information from individual decision-making. Here we introduce an agent-based model, infused with sociological data from smallholders, overlaid on a GIS layer to represent individual smallholders, and used to simulate the impact of thousands of harvesting decisions. Our preliminary results suggest that certain smallholder characteristics (such as …

Peer Influence Of Non-Industrial Private Forest Owners In The Western Upper Peninsula Of Michigan, Jillian R. Schubert, Audrey L. Mayer

College of Forest Resources and Environmental Science Publications

Understanding how non-industrial private forest (NIPF) owners gain and share information regarding the management of their property is very important to policy makers, yet our knowledge regarding how and to what degree this information flows over privately owned landscapes is limited. The work described here seeks to address this shortfall. Widely administered surveys with close-ended questions may not adequately capture this information flow within NIPF owner communities. This study used open-ended questions in interviews of clusters of NIPF owners to determine whether and to what extent owners influence each other directly (through conversations or referrals to sources of advice) or …

Use Of Remote Sensing To Support Forest And Wetlands Policies In The Usa, Audrey L. Mayer, Ricardo D. Lopez

College of Forest Resources and Environmental Science Publications

The use of remote sensing for environmental policy development is now quite common and well-documented, as images from remote sensing platforms are often used to focus attention on emerging environmental issues and spur debate on potential policy solutions. However, its use in policy implementation and evaluation has not been examined in much detail. Here we examine the use of remote sensing to support the implementation and enforcement of policies regarding the conservation of forests and wetlands in the USA. Specifically, we focus on the “Roadless Rule” and “Travel Management Rules” as enforced by the US Department of Agriculture Forest Service …