Life Sciences Commons^™

Drone Images Afford More Detections Of Marine Wildlife Than Real-Time Observers During Simultaneous Large-Scale Surveys, Amanda J. Hodgson, Nat Kelly, David Peel

Research outputs 2022 to 2026

There are many advantages to transitioning from conducting marine wildlife surveys via human observers onboard light-aircraft, to capturing aerial imagery using drones. However, it is important to maintain the validity of long-term data series whilst transitioning from observer to imagery surveys. We need to understand how the detection rates of target species in images compare to those collected from observers in piloted aircraft, and the factors influencing detection rates from each platform. We conducted trial ScanEagle drone surveys of dugongs in Shark Bay, Western Australia, covering the full extent of the drone’s range (∼100 km), concurrently with observer surveys, with …

Avian Abundance And Diversity On Knoxville Wildlife Area In California Following The County Fire Of 2018, Katherine S. Miller, Stacy Martinelli, Levi E. Souza

National Quail Symposium Proceedings

Wildfires can have negative impacts on wildlife during and immediately after a burn event, yet these fires are also necessary for plant succession and biodiversity. Knoxville Wildlife Area (KWA) in Napa County, California, USA is a diverse environment that contains oak woodlands, chaparral, grasslands, and riparian corridors. In July 2018, the County Fire burned 36,353 ha in the Northern California Interior Coast Ranges, including 2,429 ha on KWA. California Department of Fish and Wildlife employees used this opportunity to monitor avian abundance and diversity as the burned area revegetates. From 10 June through 14 June 2019, we began a pilot …

A Nematode Community-Based Integrated Productivity Efficiency (Ipe) Model That Identifies Sustainable Soil Health Outcomes: A Case Of Compost Application In Carrot Production, A. Habteweld, A. Kravchencko, Parwinder Grewal, H. Melakeberhan

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Percent soil organic matter (SOM), pH and crop yield are among the biophysicochemical process-driven soil health indicators (SHIs). However, identifying sustainable soil health conditions using these SHIs is limited due to the lack of Integrated Productivity Efficiency (IPE) models. We define IPE as a concept that identifies best-to-worst-case soil health outcomes by assessing the effect of agronomic practices on weighted abundance of functional guilds (WAFG) of beneficial soil organisms and SHIs simultaneously. Expressing WAFG of all beneficial nematodes (x-axis) and SHIs (y-axis) as a percent of untreated control and regression of x and y reveals four quadrants describing worst-to-best-case outcomes …

First Estimates Of Greenland Shark (Somniosus Microcephalus) Abundances In Arctic Waters, Taryn Szalay

Scientific Communication News

No abstract provided.

Impact Of The Degree Of Urbanization On Bird Abundance And Diversity, Gabrielle Doyle, Sheila Garcia, Sophie Kidd, Tra'dayja Smith

Fall Showcase for Research and Creative Inquiry

Bird diversity and abundance in Farmville, Virginia. Sampling twice a day, four days a week.

Amphibian And Reptile Community Responses To Forest And Riparian Disturbance, Jacquelyn Christine Guzy

Graduate Theses and Dissertations

Riparian zones are transitional, semi-terrestrial areas regularly influenced by freshwater. These areas serve as dispersal corridors for many animal and plant species and ultimately function as important reservoirs of biodiversity in altered landscapes. While much of the riparian habitat in the United States has been affected by anthropogenic activities, management actions may mitigate potentially negative influences of these activities. For example, Streamside Management Zones (i.e., riparian buffers; SMZs) are commonly implemented within managed forests to protect water quality, but may also provide habitat for riparian-associated wildlife. Yet, little research has rigorously addressed the value of SMZs for wildlife, particularly cryptic …

Integrating Multiple Genetic Detection Methods To Estimate Population Density Of Social And Territorial Carnivores, Sean M. Murphy, Ben C. Augustine, Jennifer R. Adams, Lisette P. Waits, John J. Cox

Forestry and Natural Resources Faculty Publications

Spatial capture–recapture models can produce unbiased estimates of population density, but sparse detection data often plague studies of social and territorial carnivores. Integrating multiple types of detection data can improve estimation of the spatial scale parameter (σ), activity center locations, and density. Noninvasive genetic sampling is effective for detecting carnivores, but social structure and territoriality could cause differential detectability among population cohorts for different detection methods. Using three observation models, we evaluated the integration of genetic detection data from noninvasive hair and scat sampling of the social and territorial coyote (Canis latrans). Although precision of estimated density was …

Impacts Of Strategic Grazing And Fire On Soil Seed Bank Heterogeneity In Mixed-Grass Prairie, Kassidy Weathers, Lan Xu, Patricia Johnson

Natural Resource Management Faculty Publications

Native plant communities in the Northern Great Plains evolved under periodic fire and substantial grazing pressure from native herbivores, two main drivers maintaining the heterogeneity of grassland ecosystems. However, contemporary management practices focus on maximizing livestock production through fire suppression and uniform grazing strategies, resulting in decreased vegetation heterogeneity, species richness, wildlife habitat, and biodiversity. Objectives of this study were to evaluate and compare the effectiveness of patch-burn grazing (PBG) and winter-patch grazing (WPG) managements on soil seed bank heterogeneity in terms of species 1) richness, 2) composition, 3) abundance, and 4) diversity. Two soil cores (10-cm dia × 10-cm …

Spatially Explicit Population Estimates Of The Florida Black Bear, Jacob Michael Humm

Masters Theses

The Florida black bear (Ursus americanus floridanus) is currently comprised of 7 isolated subpopulations: Apalachicola, Eglin, Osceola, Ocala/St. Johns, Chassahowitzka, Highlands/Glades, and Big Cypress. The last statewide assessment of Florida black bear population dynamics was conducted by Simek et al. (2005) using traditional capture-markrecapture methods. The subspecies was removed from Florida’s List of State Threatened Species in 2012 contingent upon the formulation of a management plan that would maintain viable subpopulations of black bears in suitable habitat. Accurate population estimates for each of the remaining black bear subpopulations in Florida were needed to achieve the management goals of …

A Bayesian Method For Assessing Multi-Scale Species-Habitat Relationships, Erica F. Stuber, Lutz F. Gruber, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Context Scientists face several theoretical and methodological challenges in appropriately describing fundamental wildlife-habitat relationships in models. The spatial scales of habitat relationships are often unknown, and are expected to follow a multi-scale hierarchy. Typical frequentist or information theoretic approaches often suffer under collinearity in multiscale studies, fail to converge when models are complex or represent an intractable computational burden when candidate model sets are large.

Objectives Our objective was to implement an automated, Bayesian method for inference on the spatial scales of habitat variables that best predict animal abundance.

Methods We introduce Bayesian latent indicator scale selection (BLISS), a Bayesian …

Effects Of Environmental Factors On The Abundance Of Blacklegged Ticks, Jasmine L. Miller, Roger A. Lebrun, Howard S. Ginsberg

Senior Honors Projects

The nymphal stage of the blacklegged tick, Ixodes scapularis, is the major vector of Lyme disease, the most common vector-borne disease in North America. Tick abundance has generally been estimated using either flag/drag samples or samples from hosts. However, the biases of these sampling methods have not been adequately studied. We compared samples using both methods from sites in Massachusetts and Wisconsin. Tick abundance was compared with variables related to weather (temperature, relative humidity, and tick adverse moisture events), vegetation (canopy cover, tree density, shrub density, ground vegetation, and leaf litter cover), and host abundance (mice, small mammals, medium …

Interactions Between Short-Beaked Common Dolphin (Delphinus Delphis) And The Winter Pelagic Pair-Trawl Fishery Ff Southwest England (Uk), Marijke N. De Boer, James T. Saulino, Mardik F. Leopold, Peter J.H. Reijnders, Mark P. Simmonds

Mark P. Simmonds, OBE

During offshore and onshore studies (2004 to 2009), the interactions between pair-trawls and short-beaked common dolphins (Delphinus delphis) were studied to better understand the impact of bycatch. A ‘hotspot’ area where pair-trawls overlapped with high dolphin abundance was identified. We made comparisons between boat-based data collected in absence and presence of pair-trawlers. The relative abundance and group-size of dolphins was significantly higher in the presence of pair-trawlers. Dolphins were observed associating with towing and hauling procedures. Significantly, more carcasses occurred in areas with hauling-activity than those without. Body-temperatures obtained from carcasses found near operating pair-trawlers indicated that bycatch mostly occurred …

Habitat Use And Abundance Patterns Of Sandhill Cranes In The Central Platte River Valley, Nebraska, 2003–2010, Todd Joseph Buckley

School of Natural Resources: Dissertations, Theses, and Student Research

The Central Platte River Valley (CPRV) in Nebraska is an important spring stopover area for the midcontinent population of sandhill cranes. Alterations to crop rotation and loss habitat in the CPRV pose a risk to the population. Personnel drove designated routes in the CPRV from 2003–2010 to record the presence of cranes in agricultural fields and estimate abundance. I developed and evaluated models to predict habitat use and flock sizes. Alfalfa was predicted to receive the highest use followed by corn, soybeans, winter wheat, grassland, and shrubland. Use of all habitats and flock size increased as field area increased. Flock …

Evaluating The Effectiveness Of Grassbed Treatments As Habitat For Juvenile Black Bass In A Drawdown Reservoir, D. R. Ratcliff, Wayne A. Wurtsbaugh, J. Zustak

Watershed Sciences Faculty Publications

Many reservoirs in arid regions experience highly variable water levels caused by seasonal inflow fluctuations and designated outflow requirements. At Shasta Lake, California, managers plant cereal-grain grassbeds on exposed drawdown shorelines to increase juvenile fish habitat, localize productivity, and increase invertebrate fish prey. To determine the efficacy of these plantings, the abundance of juvenile black basses Micropterus spp. (20–55 mm standard length) and the amount of periphyton and macroinvertebrate prey were compared among three treatment types: (1) planted grassbeds of cereal barley Hordeum vulgare; (2) artificial rope grassbeds, which eliminated physical deterioration and nutrient release; and (3) nonplanted control sites …

Zur Populationsökologie Und Raumnutzung Der Steppenwühlmaus Microtus Brandti (Radde, 1861) In Der Fortpflanzungsperiode, Ulrich Zöphel, N. Dawaa

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

During the growing season between 1988 and 1990 the population biology of Brandt’s vole (Microtus brandti) was observed in a population near Ulaanbaatar. Mark-recapture techniques (1,438 markings, 19,606 recaptures in total) and complementary methods were used. The density maximum was observed in July with 98 (1988); 169 (1989) and 94 (1990) individuals/ha and the population fluctuated by a factor of 7.4.

At the beginning of reproductive period the males disperse over a minimum distance of one female home range whereas the females do not migrate after winter. The typical mating system is promiscuity. Youngsters have been recorded from …

Linear And Nonlinear Effects Of Habitat Structure On Composition And Abundance In The Macroinvertebrate Community Of A Large River, Timothy W. Stewart, Tammy L. Shumaker, Thomas A. Radzio

Timothy W. Stewart

We used an experiment and regression analyses to quantify effects of spatial variation in habitat structure abundance on a riverine macroinvertebrate community under winter conditions. Concrete slabs (0.21 m2; n 5 24) with different numbers of stones (mean individual stone surface area 5 6.44 cm2) attached to upper faces were placed in the James River and retrieved after 28 d. Macroinvertebrate abundance and taxonomic richness on slabs were significantly positively related to stone abundance. Total macroinvertebrate abundance and abundance of oligochaetes (Nais spp.), Asiatic clams (Corbicula fluminea), caddisflies (Leptoceridae), riffle beetles (Elmidae) and stoneflies (Strophopteryx sp.) were linearly related to …

Mesozooplankton Distribution And Abundance In The Pagan River: A Nutrient Enriched Subestuary Of The James River, Virginia, Lillian N. Davis, Harold G. Marshall

Biological Sciences Faculty Publications

The mesozooplankton in the Pagan River was dominated by calanoid copepods, with abundance peaks occurring during late winter-early spring and from late summer into early fall. This included spring, summer, and fall abundance maxima. The total mean abundance of the mesozooplankton was 3,008/m³.

Hydroacoustic Assessment Of Abundance And Diel Distribution Of Sockeye Salmon And Kokanee In The Sawtooth Valley Lakes, Idaho, D. Beauchamp, Chris Luecke, Wayne A. Wurtsbaugh, H. G. Gross, Phaedra E. Budy, S. Spaulding, R. Dilenger, C. P. Gubala

Watershed Sciences Faculty Publications

We used dual-beam hydroacoustics and echo integration techniques, combined with midwater trawling and gillnetting, to assess the abundance and distribution of the endangered Snake River juvenile sockeye salmon and resident kokanee (both Oncorhynchus nerka) in Sawtooth Valley lakes of Idaho during September 1991 and 1992. Abundance of O. nerka varied among the four lakes containing this species (12,500–257,000) and varied between years in Redfish Lake (86,400 in 1994 and 241,000 in 1992) and Alturas Lake (230,000 in 1991 and 257,000 in 1992). In Alturas Lake, where piscivore densities were high and zooplankton densities were low, small acoustic targets (≤18 cm …

Effects Of Moonlight And Daylight On Hydroacoustic Estimates Of Pelagic Fish Abundance, Chris Luecke, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

To determine how moonlight and daylight affect hydroacoustic estimates of fish abundance, we used a dual-beam transducer and echo integration to survey pelagic fish (primarily Bonneville ciscoes Prosopium gemmifer) in Bear Lake, Utah and Idaho. During the new moon, the fish were dispersed (not schooling) below the thermocline, chiefly at the depths of 10–20 m. At full moon, they were dispersed but much closer to the bottom, where they were difficult to detect. Acoustic estimates offish density and biomass during full moons were approximately 50% of values derived during new moons. A diel survey during a new moon indicated that …

The Influence Of Redd Distribution And Microhabitat Availability On The Distribution And Abundance Of Young-Of-The-Year Trout In The Green River, Utah, Michael J. Buntjer

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Redd distribution, redd density, and physical habitat were used to explain the distribution and abundance of young-of-the-year (YOY) brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss) in the Green River, Utah. The importance of variables at both a microhabitat and macrohabitat scale were assessed using stepwise regression analysis. Availability of cover (rock and vegetation) and proximity to spawning sites were the most important variables used to explain the distribution and abundance of YOY brown trout and rainbow trout. In addition, YOY brown trout and rainbow trout occupied specific microhabitats and showed patterns of use for …