Life Sciences Commons^™

Systematics And Diversification Patterns Of Morphologically And Ecologically Diverse Lineages Of Agaricomycetes: Clavariaceae And Cantharellales, Joshua Mark Birkebak

Doctoral Dissertations

The recent advent of molecular tools and methods to understand the diversity of living organisms allows for exploration of former untestable theories concerning the diversity of fungi. Here we assess the morphologically based classification of the family Clavariaceae in light of molecular phylogenetic reconstruction and propose a revised classification base on natural assemblages. We used stable isotope ratios to uncover a biotrophic nutritional mode for much of the family, which had not been well understood historically. We also investigate several enigmatic lineages of agaricoid or cantharelloid fruiting body producing fungi within a clade of otherwise clavarioid fruiting bodies. We provide …

Linking Physiology And Biogeography: Disentangling The Constraints On The Distributions Of Ant Species, Lacy Danikas Chick

Doctoral Dissertations

Understanding the factors that limit the distribution of species is at the core of ecological and biogeographical research, and is critical if we are to predict the responses of key ecosystem components to ongoing climatic changes. My doctoral research seeks to provide an understanding of how thermal physiology influences species’ distributions and better define the mechanisms underlying geographic variation in biodiversity. By using natural temperature gradients (both elevational and latitudinal) and coupling controlled laboratory experiments with field observations and null modeling approaches, I was able to document the role of inter-specific variation in thermal physiology and, more interesting, inter-population variation …

Determination Of Dispersal Patterns And Characterization Of Important Habitats For Lake Sturgeon Restoration In The Upper Tennessee River System, Christina Grace Saidak

Masters Theses

Lake Sturgeon, Acipenser fulvescens, are one of the slowest to reach sexual maturity and longest-lived freshwater fish species in North America. These fish are a species of special concern by the U.S. Fish and Wildlife Service, a vulnerable species by the American Fisheries Society (Jelks et al. 2008), and a threatened species in Tennessee (Chiasson et al. 1997; Williams et al. 1989). They have been reintroduced into the Upper Tennessee River system since 2000.

Since December 2013, 49 Lake Sturgeon have been implanted with ultrasonic acoustic transmitters, and 26 fixed-station receivers installed throughout the Upper Tennessee River System to …

Environmental Controls On The Diversity And Distribution Of Endosymbionts Associated With Phacoides Pectinatus (Bivalvia: Lucinidae) From Shallow Mangrove And Seagrass Sediments, St. Lucie County, Florida, Thomas Walters Doty

Masters Theses

Lucinid bivalves are capable of colonizing traditionally inhospitable shallow marine sediments due to metabolic functions of bacterial endosymbionts located within their gills. Because lucinids can often be the dominant sediment infauna, defining their roles in sediment and pore fluid geochemical cycling is necessary to address concerns related to changes in coastal biological diversity and to understanding the sensitivity of threatened coastal ecosystems over time. However, there has been limited research done to understand the diversity and distribution of many lucinid chemosymbiotic systems. Therefore, the goals of this thesis were to evaluate the distribution of Phacoides pectinatus and its endosymbiont communities …

Efficacy Of Visual Surveys For White-Nose Syndrome At Bat Hibernacula, Amanda Frances Janicki

Masters Theses

White-Nose Syndrome (WNS) is an epizootic disease in hibernating bats caused by the fungus Pseudogymnoascus destructans. Surveillance for P. destructans at bat hibernacula consists primarily of visual surveys of bats, collection of potentially infected bats, and submission of these bats for laboratory testing. Cryptic infections (bats that are infected but display no visual signs of fungus) could lead to the mischaracterization of the infection status of a site and the inadvertent spread of P. destructans. We determined the efficacy of visual detection of P. destructans by examining visual signs and molecular detection of P. …

Effects Of Forest Management Practices On Raccoon Ecology In A Longleaf Pine Ecosystem, Ronald Brian Kirby

Masters Theses

Raccoons (Procyon lotor) are ecological generalists common throughout a variety of habitats across their range. Although considered an economically important furbearer species in many regions, they are considered potentially important nest predators of certain species. Because raccoons may have a significant ecological impact on the landscape, it remains important to understand their ecology in a variety of ecosystems. We studied raccoon ecology in a longleaf pine ecosystem in southwestern Georgia, where little information for the species exists. Specifically, we assessed 269 daytime resting sites (i.e., refugia) associated with 31 radio-collared adult raccoons (18M, 13F) during 2014-2015 using an …

A New Adaptive Landscape: Urbanization As A Strong Evolutionary Force, Lauren Christie Breza

Masters Theses

Urbanization is rapidly increasing as human population growth steadily grows, but there is little consensus of the ecological consequence of this population shift and almost no information of the evolutionary consequences for local biodiversity. Nearly two-thirds of the world’s population will live in city centers by 2050 with profound impacts on landscapes that can act as important agents of selection. This study aims to identify 1) the net effect of urbanization on species richness, 2) how phylogenetic diversity varies between urban and rural sites, and 3) the strength of urbanization as a selection pressure. First, a meta-analysis was conducted in …

Rare Occurrences Of Free-Living Bacteria Belonging To Sedimenticola From Subtidal Seagrass Beds Associated With The Lucinid Clam, Stewartia Floridana, Aaron M. Goemann

Masters Theses

Lucinid clams and their sulfur-oxidizing endosymbionts comprise two compartments of a three-stage, biogeochemical relationship among the clams, seagrasses, and microbial communities in marine sediments. A population of the lucinid clam, Stewartia floridana, was sampled from a subtidal seagrass bed at Bokeelia Island Seaport in Florida to test the hypotheses: (1) S. floridana, like other lucinids, are more abundant in seagrass beds than bare sediments; (2) S. floridana gill microbiomes are dominated by one bacterial operational taxonomic unit (OTU) at a sequence similarity threshold level of 97% (a common cutoff for species level taxonomy) from 16S rRNA genes; …

Conservation Planning In A Changing World, Austin Walker Milt

Doctoral Dissertations

As a science and practice dedicated to preventing, stopping, and reversing negative effects on nature, conservation is constantly faced with new challenges. Combine this fact with the rise of large, freely available datasets and computational power, and the result is a need to advance the methods and conceptual approach to conservation planning. In my dissertation I present novel methods and address research questions that aim to keep conservation science and practice relevant and effective in a changing world. This picture of continual change is illustrated in Chapter 1, in which I explore how the ongoing collection of observations of rare …

Evidence Of Late Quaternary Fires From Charcoal And Siliceous Aggregates In Lake Sediments In The Eastern U.S.A., Joanne P. Ballard

Doctoral Dissertations

The late-glacial transition to the Holocene, 15,000–11,600 cal yr BP, is an enigmatic period of dynamic global changes and a major extinction event in North America. Fire is an agent of disturbance that transforms the environment physically and chemically, and affects plant community composition. To improve understanding of the linkages between fire, vegetation, and climate over the late glacial and Holocene in the eastern U.S., I analyzed lake-sediment cores for charcoal and indicators of wood ash, and compared results to existing pollen records. A new microscopic charcoal record from Anderson Pond, Tennessee revealed high fire activity from 23,000–15,000 cal yr …

Evolution And Phylogeny Of The Parasitoid Subfamily Phasiinae (Diptera: Tachinidae), Jeremy Daniel Blaschke

Doctoral Dissertations

The first molecular phylogenetic analysis of the agriculturally important parasitoid subfamily Phasiinae (Diptera: Tachinidae) is presented, estimated from 128 worldwide taxa (80 genera) and approximately 7.6 kilobases of nuclear data. Special emphasis is placed on taxa with controversial taxonomic placement. The resultant phylogenetic tree is used to reconstruct ancestral character states, trace the evolution of significant adaptive traits within the Tachinidae, and test hypotheses about the classification of Phasiinae. Subfamily placements of the taxa Eutherini, Epigrimyiini, Litophasia, Strongygastrini, and Parerigonini are confidently resolved, the former three within Dexiinae and the latter two within Phasiinae. Due to sparse molecular evidence, …

Exploring How Clean Water Act Enforcement Influences Stream Macroinvertebrate Communities, Shelby Renee Burks Ward

Masters Theses

Enforcement is a key feature of the Clean Water Act. The Clean Water Act’s National Pollutant Discharge Elimination System (NPDES) permit program regulates effluent into streams that may impact aquatic life. Yet, authorities do not always enforce permits when violations occur. My research examines macroinvetebrate survey data near NPDES permitted facilities in Kentucky and Tennessee to determine the influence of enforcement actions on aquatic biodiversity. Pre-existing data from the Environmental Protection Agency and state agencies was used to make quantitative and spatial comparisons.

My first study used multiple regression to explore whether enforcement and freshwater community indicators changed together. North …

Mechanisms For Social Influence, Jeremy David Auerbach

Masters Theses

Throughout the thesis, I study mathematical models that can help explain the dependency of social phenomena in animals and humans on individual traits. The first chapter investigates consensus building in human groups through communication of individual preferences for a course of action. Individuals share and modify these preferences through speaker listener interactions. Personality traits, reputations, and social networks structures effect these modifications and eventually the group will reach a consensus. If there is variation in personality traits, the time to reach consensus is delayed. Reputation models are introduced and explored, finding that those who can best estimate the average initial …

Survival And Growth Rate Of Translocated Freshwater Mussels Lampsilis Fasciola And Medionidus Conradicus, Laura L. Pullum

Masters Theses

Freshwater mussels (Family Unionidae and Margaritiferidae) are a widely threatened group of bivalve molluscs, particularly in the Southeastern United States. Translocation of freshwater mussels is an increasingly common conservation method. However, there are relatively few studies that quantitatively investigate the factors influencing translocation success or failure. In October 2013, hundreds of Medionidus conradicus and Lampsilis fasciola were translocated to the Pigeon and Nolichucky Rivers in Tennessee, with an interim partial survey (June 2014) and a full survey (October 2014). In this study, I analyze this field-collected data to determine the mechanism(s) that currently influence the outcomes of Tennessee mussel translocation. …

Bats And Disease: Behavioral And Community Responses Of Southern Bat Populations During The White-Nose Syndrome Epizootic, Riley Fehr Bernard

Doctoral Dissertations

This dissertation investigates regional differences in the behavior and activity of bats in eastern North America during the white-nose syndrome epizootic, specifically in the understudied region of the Southeastern United States. An introductory section provides a brief review of the history of white-nose syndrome, an emerging infectious disease in bats, and its introduction into North America. Chapter one provides the first documented evidence of bat activity outside of hibernacula throughout winter. The research presented in chapter two attempts to explain the variation in load and prevalence of P. destructans among species, sites and between years. Finally, chapter three examines the …

Influence Of Habitat Manipulations On Northern Bobwhite Resource Selection On A Reclaimed Surface Mine, Jarred Milford Brooke

Masters Theses

Northern bobwhite populations have declined range-wide over the past 40 years. The intensification of agriculture, conversion of pastures to nonnative cool-season grasses, advanced succession, and urbanization have resulted in the deterioration and elimination of bobwhite habitat. Recent conservation efforts have called for a landscape-level approach to the conservation of northern bobwhite populations. However, identifying large areas to manage bobwhite populations is problematic. Reclaimed mine lands offer an opportunity to manage large contiguous tracts of early successional vegetation to conserve northern bobwhite populations. We studied northern bobwhite resource selection throughout the year from August 2009 to March 2014. We investigated the …

Habitat Use And Response To Wetland Management Practices Of Non-Breeding Dabbling Ducks In Western Tennessee, Matthew Doddridge Mcclanahan

Masters Theses

Western Tennessee is an important area for non-breeding waterfowl in the Mississippi Flyway, including over 40% of the Mississippi Flyway population of American black ducks (Anas rubripes, hereafter black ducks), a species in decline. Information is lacking on waterfowl community ecology in the region, and managers must identify key habitats and consider functional use and potential predictors of resource use by non-breeding communities. Impacts of wetland management practices, such as moist-soil disking and subsequent planting of desirable grasses (i.e., Japanese millet [Echinochloa frumentacea], hereafter millet), must also be tested relative to impacts on waterfowl use and …

Incorporating Redispersal Into Myrmecochory: Addressing The Uniqueness Of Microsites Near Ant Nests In An Eastern North American Forest, Kent Connell

Chancellor’s Honors Program Projects

No abstract provided.

Forest Or Phylogeny?: Untangling Phylogenetic Signal From Selection Pressure Using Barronopsis Texans, Alexandra I. Chatman

Chancellor’s Honors Program Projects

No abstract provided.