Life Sciences Commons^™

Next-Generation Crop Monitoring Technologies: Case Studies About Edge Image Processing For Crop Monitoring And Soil Water Property Modeling Via Above-Ground Sensors, Nipuna Chamara

Dissertations and Doctoral Documents from University of Nebraska-Lincoln, 2023–

Artificial Intelligence (AI) has advanced rapidly in the past two decades. Internet of Things (IoT) technology has advanced rapidly during the last decade. Merging these two technologies has immense potential in several industries, including agriculture.

We have identified several research gaps in utilizing IoT technology in agriculture. One problem was the digital divide between rural, unconnected, or limited connected areas and urban areas for utilizing images for decision-making, which has advanced with the growth of AI. Another area for improvement was the farmers' demotivation to use in-situ soil moisture sensors for irrigation decision-making due to inherited installation difficulties. As Nebraska …

Agriculture 4.0 And Beyond: Evaluating Cyber Threat Intelligence Sources And Techniques In Smart Farming Ecosystems, Hang T. Bui, Hamed Aboutorab, Arash Mahboubi, Yansong Gao, Nazatul H. Sultan, Aufeef Chauhan, Mohammad Z. Parvez, Michael Bewong, Rafiqul Islam, Zahid Islam, Seyit A. Camtepe, Praveen Gauravaram, Dineshkumar Singh, M. A. Babar, Shihao Yan

Research outputs 2022 to 2026

The digitisation of agriculture, integral to Agriculture 4.0, has brought significant benefits while simultaneously escalating cybersecurity risks. With the rapid adoption of smart farming technologies and infrastructure, the agricultural sector has become an attractive target for cyberattacks. This paper presents a systematic literature review that assesses the applicability of existing cyber threat intelligence (CTI) techniques within smart farming infrastructures (SFIs). We develop a comprehensive taxonomy of CTI techniques and sources, specifically tailored to the SFI context, addressing the unique cyber threat challenges in this domain. A crucial finding of our review is the identified need for a virtual Chief Information …

Rescape: Transforming Coral-Reefscape Images For Quantitative Analysis, Zachary Ferris, Eraldo Ribeiro, Tomofumi Nagata, Robert Van Woesik

Ocean Engineering and Marine Sciences Faculty Publications

Ever since the first image of a coral reef was captured in 1885, people worldwide have been accumulating images of coral reefscapes that document the historic conditions of reefs. However, these innumerable reefscape images suffer from perspective distortion, which reduces the apparent size of distant taxa, rendering the images unusable for quantitative analysis of reef conditions. Here we solve this century-long distortion problem by developing a novel computer-vision algorithm, ReScape, which removes the perspective distortion from reefscape images by transforming them into top-down views, making them usable for quantitative analysis of reef conditions. In doing so, we demonstrate the …

A Reliable Diabetic Retinopathy Grading Via Transfer Learning And Ensemble Learning With Quadratic Weighted Kappa Metric, Sai Venkatesh Chilukoti, Liqun Shan, Vijay Srinivas Tida, Anthony S. Maida, Xiali Hei

Computer Science Faculty Publications

The most common eye infection in people with diabetes is diabetic retinopathy (DR). It might cause blurred vision or even total blindness. Therefore, it is essential to promote early detection to prevent or alleviate the impact of DR. However, due to the possibility that symptoms may not be noticeable in the early stages of DR, it is difficult for doctors to identify them. Therefore, numerous predictive models based on machine learning (ML) and deep learning (DL) have been developed to determine all stages of DR. However, existing DR classification models cannot classify every DR stage or use a computationally heavy …

Foodmask: Real-Time Food Instance Counting, Segmentation And Recognition, Huu-Thanh Nguyen, Yu Cao, Chong-Wah Ngo, Wing-Kwong Chan

Research Collection School Of Computing and Information Systems

Food computing has long been studied and deployed to several applications. Understanding a food image at the instance level, including recognition, counting and segmentation, is essential to quantifying nutrition and calorie consumption. Nevertheless, existing techniques are limited to either category-specific instance detection, which does not reflect precisely the instance size at the pixel level, or category-agnostic instance segmentation, which is insufficient for dish recognition. This paper presents a compact and fast multi-task network, namely FoodMask, for clustering-based food instance counting, segmentation and recognition. The network learns a semantic space simultaneously encoding food category distribution and instance height at pixel basis. …

Vibmilk: Non-Intrusive Milk Spoilage Detection Via Smartphone Vibration, Yuezhong Wu, Wei Song, Yanxiang Wang, Dong Ma, Weitao Xu, Mahbub Hassan, Wen Hu

Research Collection School Of Computing and Information Systems

Quantifying the chemical process of milk spoilage is challenging due to the need for bulky, expensive equipment that is not user-friendly for milk producers or customers. This lack of a convenient and accurate milk spoilage detection system can cause two significant issues. First, people who consume spoiled milk may experience serious health problems. Secondly, milk manufacturers typically provide a “best before” date to indicate freshness, but this date only shows the highest quality of the milk, not the last day it can be safely consumed, leading to significant milk waste. A practical and efficient solution to this problem is proposed …

Texcot22, Md Ahmed Al Muzaddid, William J. Beksi

Computer Science and Engineering Datasets

The TexCot22 dataset is a set of cotton crop video sequences for training and testing multi-object tracking methods. Each tracking sequence is 10 to 20 seconds in length. The dataset contains of a total of 30 sequences of which 17 are for training and the remaining 13 are for testing. Among the training sequences, 2 of them consist of roughly 5,000 annotated images, which can be used to train a cotton boll detection model. The video sequences were captured at 4K resolution and at distinct frame rates (e.g., 10, 15, 30). There are typically 2 to 10 cotton bolls per …

Triphlapan: Predicting Hla Molecules Binding Peptides Based On Triple Coding Matrix And Transfer Learning, Meng Wang, Chuqi Lei, Jianxin Wang, Yaohang Li, Min Li

Computer Science Faculty Publications

Human leukocyte antigen (HLA) recognizes foreign threats and triggers immune responses by presenting peptides to T cells. Computationally modeling the binding patterns between peptide and HLA is very important for the development of tumor vaccines. However, it is still a big challenge to accurately predict HLA molecules binding peptides. In this paper, we develop a new model TripHLApan for predicting HLA molecules binding peptides by integrating triple coding matrix, BiGRU + Attention models, and transfer learning strategy. We have found the main interaction site regions between HLA molecules and peptides, as well as the correlation between HLA encoding and binding …

Machine Learning As A Tool For Early Detection: A Focus On Late-Stage Colorectal Cancer Across Socioeconomic Spectrums, Hadiza Galadima, Rexford Anson-Dwamena, Ashley Johnson, Ghalib Bello, Georges Adunlin, James Blando

Community & Environmental Health Faculty Publications

Purpose: To assess the efficacy of various machine learning (ML) algorithms in predicting late-stage colorectal cancer (CRC) diagnoses against the backdrop of socio-economic and regional healthcare disparities. Methods: An innovative theoretical framework was developed to integrate individual- and census tract-level social determinants of health (SDOH) with sociodemographic factors. A comparative analysis of the ML models was conducted using key performance metrics such as AUC-ROC to evaluate their predictive accuracy. Spatio-temporal analysis was used to identify disparities in late-stage CRC diagnosis probabilities. Results: Gradient boosting emerged as the superior model, with the top predictors for late-stage CRC diagnosis being anatomic site, …