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Mining And Analysis Of Chloroplast Simple Sequence Repeats (Ssrs) From Eight Species Of Aquilaria, Muhammad Syahmi Hishamuddin, Ahmad Syazwan Samsuddin, Rozi Mohamed Jan 2022

Mining And Analysis Of Chloroplast Simple Sequence Repeats (Ssrs) From Eight Species Of Aquilaria, Muhammad Syahmi Hishamuddin, Ahmad Syazwan Samsuddin, Rozi Mohamed

Turkish Journal of Botany

Aquilaria is a tropical forest tree, producer of the famed and expensive agarwood. Aggressive collection of agarwood put strain on the natural stands of Aquilaria species, sparking efforts to domesticate the tree and cultivate agarwood in plantations. However, tree domestication progress is hampered by the scarcity of genomic resources that is crucial for breeding programs. In this study, the complete chloroplast (cp) genome sequences from eight Aquilaria species were analyzed in silico. For identification of the simple sequence repeats (SSRs), MISA PERL script which had a repeat length of 12 for mononucleotides (mono-), 6 for dinucleotides (di-), 4 for trinucleotides …


Morpho-Physiological Diversity Of Barley (Hordeum Vulgare L.) Germplasm For Heat Tolerance, Muhammad Ashraf, Fahad Al-Qurainy, Muhammad Sajid Aqeel Ahmad, Muhammad Yasir Iqbal, Adnan Mehmood, Alia Riffat, Ambreen Khadija Alvi Jan 2022

Morpho-Physiological Diversity Of Barley (Hordeum Vulgare L.) Germplasm For Heat Tolerance, Muhammad Ashraf, Fahad Al-Qurainy, Muhammad Sajid Aqeel Ahmad, Muhammad Yasir Iqbal, Adnan Mehmood, Alia Riffat, Ambreen Khadija Alvi

Turkish Journal of Botany

The aim of the present study was to examine the diversity for heat tolerance in a set of 105 accessions using some key morphophysiological attributes. The data was standardized by calculating percent change over control, and used for phonetic analysis and construction of dendograms based on distance matrix (all primary data is given as supplementary material listed in statistical analysis section of Materials and Methods). These distance matrices were then used for the unweighted pair group method with arithmetic mean (UPGMA) cluster analysis using the sequential agglomerative hierarchical nonoverlapping (SAHN) method. The cluster analysis indicated some potential attributes that could …


Karyomorphology, Ploidy Analysis, And Flow Cytometric Genome Size Estimation Of Medicago Monantha Populations, Homa Zarabizadeh, Ghasem Karimzadeh, Sajad Rashidi Monfared, Saeed Tarkesh Esfahani Jan 2022

Karyomorphology, Ploidy Analysis, And Flow Cytometric Genome Size Estimation Of Medicago Monantha Populations, Homa Zarabizadeh, Ghasem Karimzadeh, Sajad Rashidi Monfared, Saeed Tarkesh Esfahani

Turkish Journal of Botany

Karayomorphological analysis and monoploid genome size (2Cx DNA) of 12 Iranian Medicago monantha populations are reported. Flow cytometric analysis were conducted on freshly collected seeds, using Solanum lycopersicum cv. Stupicke (2C DNA = 1.96 pg), as the internal reference standard. All populations were diploid with variable degrees of mixoploidy and two different chromosome numbers within each population. Totally, six chromosome numbers of 22, 28, 30, 32, 36, and 40 were identified. Twotyped chromosomes ("m", "sm") with a mean length of 1.65 µm (0.98-2.99 ?m) formed seven different karyotype formulas. Karyotypes were mostly symmetrical, implying the evolutionary effect of natural and …


Arundinella Stenostachya (Arundinella, Poaceae), A Reevaluated New Species From Se Asia, Liqiong Jiang, Zhenwen Liu, Ende Liu, Atchara Teerawatananon, Yuehua Wang, Hua Peng Jan 2022

Arundinella Stenostachya (Arundinella, Poaceae), A Reevaluated New Species From Se Asia, Liqiong Jiang, Zhenwen Liu, Ende Liu, Atchara Teerawatananon, Yuehua Wang, Hua Peng

Turkish Journal of Botany

Arundinella stenostachya, a new species, is described and illustrated. It is morphologically similar to A. decempedalis and A. bengalensis, but differs from the former species by the length of panicle branches, type of trichome on nodes and pedicels length, and from the latter in height and diameter of culms, the length and width of leaf blades, pedicels length, and the length of panicles and branches. The new species has been mistakenly identified as A. decempedalis and A. bengalensis. Molecular analyses based on ITS sequences also support A. stenostachya as a distinct species.


Dna Barcoding Analysis And Phylogenetic Relationships Of Indian Wild Coffee Species, Manoj Mishra, Pavankumar Jingade, Arun Kumar C Huded Jan 2022

Dna Barcoding Analysis And Phylogenetic Relationships Of Indian Wild Coffee Species, Manoj Mishra, Pavankumar Jingade, Arun Kumar C Huded

Turkish Journal of Botany

Wild coffee species are the reservoirs of genetic diversity and could play a critical role in the genetic improvement of coffee. However, the conservation and genetic assessment of wild coffee species has been largely neglected. In the present study, DNA barcoding approaches were employed to assess the phylogenetic relationships between five indigenous wild coffee species from India and compared with two cultivated, and four wild coffee species of African origin. The efficacy of three barcoding loci namely matK,rbcL, and trnL-trnF was investigated using PCR amplification and sequence characterization. The intergenic spacer trnL-trnF is the highly polymorphic loci followed by matK …


Mapping Quantitative Trait Loci And Developing First Molecular Marker For Race 5 Of Podosphera Xanthii Resistance In Melon (Cucumis Melo L.), Abdullah Ünlü, İlknur Polat, Aytül Yildirim, Ahmet Naci̇ Onus Jan 2022

Mapping Quantitative Trait Loci And Developing First Molecular Marker For Race 5 Of Podosphera Xanthii Resistance In Melon (Cucumis Melo L.), Abdullah Ünlü, İlknur Polat, Aytül Yildirim, Ahmet Naci̇ Onus

Turkish Journal of Botany

Powdery mildew of melon caused by the Podosphaera xanthii factor is a disease that causes serious yield losses economically in all areas where melon is grown from Asia to Europe and America. The use of resistant varieties for the control of the disease is the most environmentally friendly method. However, traditional methods of melon breeding have made a noteworthy input to resistance varieties improvement, but they have been slow and incompetent in targeting complex powdery mildew disease resistance traits. To overcome these problems and to facilitate breeding programs, molecular markers closely linked to the Pm-R5 gene are needed for marker-assisted …


Chromosome Numbers And Genome Size Data On Species Of The Genus Petrorhagia(Caryophyllaceae) From Turkey, Kamuran Aktaş, Jaume Pellicer, Teresa Garnatje Jan 2022

Chromosome Numbers And Genome Size Data On Species Of The Genus Petrorhagia(Caryophyllaceae) From Turkey, Kamuran Aktaş, Jaume Pellicer, Teresa Garnatje

Turkish Journal of Botany

Genome size, i.e. the total amount of DNA in an unreplicated somatic nucleus is considered an important character in the biology of organisms, and it is especially relevant for land plants given the extraordinary diversity reported. Despite the continuous growth of data and the efforts aimed at increasing our understanding of plant genome size diversity, more data are needed to have an evenly representation across lineages. With this premise in mind, in this work, we investigated genome size, complemented with chromosome data in eight species of the genus Petrorhagia (Caryophyllaceae) from Turkey. Chromosome counts made indicate that the species studied …


Tripleurospermum Eskilensis (Asteraceae): A New Halophytic Species From Centralanatolia, Turkey, Mehtap Tekşen, Seher Karaman Erkul, Hayri̇ Duman, Mevlüde Alev Ateş, Mehmet Sağiroğlu Jan 2022

Tripleurospermum Eskilensis (Asteraceae): A New Halophytic Species From Centralanatolia, Turkey, Mehtap Tekşen, Seher Karaman Erkul, Hayri̇ Duman, Mevlüde Alev Ateş, Mehmet Sağiroğlu

Turkish Journal of Botany

In the present study, a new species of the genus, Tripleurospermum eskilensis (Asteraceae), is described from Central Anatolia, Turkey. The new species has been collected from Eskil region in a restricted area (Aksaray Province). It grows in salty steppe, and is closely related to T. decipiens in terms of morphological characteristics. It has also been morphologically compared with discoid and disciform capitulated species in Turkey. This study includes its detailed description, diagnostic characters, original photographs, geographical distribution, habitat and ecology, conservation status, and identification key. The comparison of Tripleurospermum eskilensis with closely related species was conducted in terms of morphological …


Iron Toxicity-Induced Dna Damage, Dna Methylation Changes, And Ltr Retrotransposon Polymorphisms In Zea Mays, Esra Arslan Yüksel, Murat Aydin, Mahmut Si̇nan Taşpinar, Güleray Ağar Jan 2022

Iron Toxicity-Induced Dna Damage, Dna Methylation Changes, And Ltr Retrotransposon Polymorphisms In Zea Mays, Esra Arslan Yüksel, Murat Aydin, Mahmut Si̇nan Taşpinar, Güleray Ağar

Turkish Journal of Botany

The impact of Fe2+ (iron)toxicity on genomic instability, DNA methylation status, and Long Terminal Repeat Retrotransposons (LTR RTs) polymorphisms on Zea mays is unknown. We investigated the toxicity of Fe2+ using Random Amplified Polymorphic DNA (RAPD), Coupled Restriction Enzyme Digestion-Random Amplification (CRED-RA) and Inter Retrotransposon Amplified Polymorphism (IRAP) assays in Zea mays seedlings, respectively. The results indicated that each dose of FeSO4 (50, 100, 200, and 300 mg/L) had a reducing effect on Genomic Template Stability (GTS) and increasing in RAPD pattern changes (DNA damage). The value of DNA methylation rised gradually depending on FeSO4 doses. Moreover, five LTR RTs …


Dianthus Berkayii (Caryophyllaceae), A New Species From Turkey, Zeki̇ Aytaç, Ali̇ Kandemi̇r, Tuğba Ertuğrul, Ahter Fi̇şne, Mevlüde Alev Ateş Jan 2022

Dianthus Berkayii (Caryophyllaceae), A New Species From Turkey, Zeki̇ Aytaç, Ali̇ Kandemi̇r, Tuğba Ertuğrul, Ahter Fi̇şne, Mevlüde Alev Ateş

Turkish Journal of Botany

Dianthus berkayii belongs to sect. Fimbriati was described and illustrated as a new species from Erzincan Province in Eastern Anatolia, Turkey. In the current study morphological, palynological, and molecular characters were compared and discussed with its closely related species. The new species is similar to D. crinitus with fimbriate corolla, linear, acuminate, ± rigid leaves. Also similar to D. vanensis with fimbriate corolla, linear, acuminate, ± rigid, curved divaricate leaves. But distinctly different from D. crinitus by having linear and curved divaricate leaves, stem with 3?4(?5) internodes (not 5?8), a style much longer than petals, and different from D. vanensis …


The Chromosomal Evolution And Analyses Of Turkish Cousinia Species, Tuna Uysal, Osman Tugay, Kuddi̇si̇ Ertuğrul, Meryem Bozkurt, Deni̇z Ulukuş, Hakki Demi̇relma Jan 2022

The Chromosomal Evolution And Analyses Of Turkish Cousinia Species, Tuna Uysal, Osman Tugay, Kuddi̇si̇ Ertuğrul, Meryem Bozkurt, Deni̇z Ulukuş, Hakki Demi̇relma

Turkish Journal of Botany

In this study, Turkish Cousinia species were examined in point of chromosome number and morphology. To our knowledge, this work is the first comprehensive chromosomal study regarding Turkish Cousinia as a whole, especially for endemics. As consistent with previous reports, the chromosome numbers are mostly 2n = 26 and have been determined also as 2n = 24 for only the members of Cynaroideae and Sphaerocephalae sections. An interesting result of this paper is that there is not any polyploid species in this taxonomic group and all of them are diploids. Concerning the chromosome evolution of the Cousinia species, we concluded …


Limacella Subtropicana (Amanitaceae, Agaricales), A New Species From Pakistan Based On Morphological And Molecular Phylogenetic Evidences, Aiman Izhar, Abdul Rehman Niazi, Muhammad Asif, Muhammad Haq Nawaz, Hira Bashir, Abdul Nasir Khalid Jan 2022

Limacella Subtropicana (Amanitaceae, Agaricales), A New Species From Pakistan Based On Morphological And Molecular Phylogenetic Evidences, Aiman Izhar, Abdul Rehman Niazi, Muhammad Asif, Muhammad Haq Nawaz, Hira Bashir, Abdul Nasir Khalid

Turkish Journal of Botany

Basidiomata of a hitherto undescribed Limacella species were collected from the grasslands of Punjab, Pakistan. We describe it as Limacella subtropicana, which is characterized by its viscid, white to creamy pileus, white to the creamy stipe, changing to brown when bruised, subglobose basidiospores measuring 4.0?6.3 × 3.7?5.5 ?m, an ixotrichodermal pileipellis with subcylindric to clavate terminal elements and the common presence of clamp connections in all tissues. Maximum likelihood and Bayesian inference analyses of ITS sequences and LSU sequences of nrDNA confirmed its placement in the genus Limacella. A comprehensive description and a comparison of the new taxon with other …


Involvement Of Poly(Adp-Ribose)Ylation (Parylation) In The Regulation Of Antioxidant Defense System In Arabidopsis Thaliana Under Salt Stress, Rengi̇n Özgür Uzi̇lday Jan 2022

Involvement Of Poly(Adp-Ribose)Ylation (Parylation) In The Regulation Of Antioxidant Defense System In Arabidopsis Thaliana Under Salt Stress, Rengi̇n Özgür Uzi̇lday

Turkish Journal of Botany

Posttranslational modifications (PTM) are one of the first responses of plants to environmental stress and involve changing the location and activity of proteins in the cell. Addition of poly(ADP-ribose) (PAR) to proteins, poly(ADP-ribose)ylation (PARylation), is a posttranslational modification resulting from the binding of ADP-ribose from NAD+ to target proteins by PAR polymerases (PARP). PARylation is involved in many physiological events in plants including abiotic and biotic stress response. The aim of this work was to understand involvement of PARylation in inducing enzymatic antioxidant defence and alternative electron sinks in response to salinity. For this purpose A. thaliana plants were treated …


Ellenberg Ecological Indicator Values, Tolerance Values, Species Niche Models For Soil Nutrient Availability, Salinity, And Ph In Coastal Dune Vegetation Along A Landward Gradient (Euxine, Turkey), Hamdi̇ Güray Kutbay, Burak Sürmen Jan 2022

Ellenberg Ecological Indicator Values, Tolerance Values, Species Niche Models For Soil Nutrient Availability, Salinity, And Ph In Coastal Dune Vegetation Along A Landward Gradient (Euxine, Turkey), Hamdi̇ Güray Kutbay, Burak Sürmen

Turkish Journal of Botany

Coastal dunes are characterised by plant species adapted to harsh conditions. Salinity and other factors (soil pH, nutrients, and climate events) vary along the landward gradient. The current study investigated the effects of environmental factors on the occurrence and composition of coastal dune plants. Ellenberg ecological indicator values (EIVs), species tolerance values (TVs), and species niche models for salinity, nutrient availability, and soil reaction were determined. EIVs were estimated using weighted averages based on the species cover-abundance for each plot. Species TVs were calculated considering the cover-abundance and EIVs (pH, nutrient, and salinity). Species niche models were determined with the …


Effect Of Seaweed-Based Liquid Extracts On Biomass Production And Lipid Accumulation In Nannochloropsis Oculata And Dunaliella Salina, Krishna Moorthy Abarna, Rani Velu, Padmavathy P, Jawahar P, Uma A, Kalidas C, Satya Prakash Shukla Jan 2022

Effect Of Seaweed-Based Liquid Extracts On Biomass Production And Lipid Accumulation In Nannochloropsis Oculata And Dunaliella Salina, Krishna Moorthy Abarna, Rani Velu, Padmavathy P, Jawahar P, Uma A, Kalidas C, Satya Prakash Shukla

Turkish Journal of Botany

Seaweed liquid fertilizers (SLFs) contain macronutrients, micronutrients and trace nutrients essential for microalgal growth. The study aims to evaluate the efficiency of SLFs on the biomass production, biochemical and physiological processes; and the study was carried out at different SLF concentrations of selected seaweeds i.e. Kappaphycus alvarezii, Gelidiella acerosa and Turbinaria ornata. The comparative analysis of the growth performance of two unicellular green alga on three different organic media suggest that the liquid fertilizer from red seaweed was highly efficient than the SLF prepared from brown seaweed. The growth rate of N. oculata and D. salina in K. alvarezii SLF …


Morphological And Phylogenetic Studies On Whalleya, With W. Hainanensis Sp. Nov, Yin-Hui Pi, Si-Han Long, You-Peng Wu, Li-Li Liu, Xu Zhang, Qing-De Long, Yan Lin, Ying-Qian Kang, Ji-Chuan Kang, Qi Rui Li Jan 2022

Morphological And Phylogenetic Studies On Whalleya, With W. Hainanensis Sp. Nov, Yin-Hui Pi, Si-Han Long, You-Peng Wu, Li-Li Liu, Xu Zhang, Qing-De Long, Yan Lin, Ying-Qian Kang, Ji-Chuan Kang, Qi Rui Li

Turkish Journal of Botany

Two species of Whalleya from Guizhou and Hainan Provinces were collected during the investigation of Xylariales from 2019 to 2021. According to morphological and molecular characteristics, Whalleya hainanensis sp. nov. and W. microplaca are introduced. Whalleya hainanensis differs from W. microplaca by its obovoid or tubular perithecia and the slightly raised stromata; and differs from W. maculata by its smaller ascospores. Their detailed morphological descriptions and illustrations are provided. The taxonomic position of Whalleya is discussed.


Archaeobotanical Evidence Of Agricultural Products In The Southern Mediterranean Part Of Turkey During The Bronze Ages From Tatarlı Höyük, Sali̇h Kavak, Hali̇l Çakan Jan 2022

Archaeobotanical Evidence Of Agricultural Products In The Southern Mediterranean Part Of Turkey During The Bronze Ages From Tatarlı Höyük, Sali̇h Kavak, Hali̇l Çakan

Turkish Journal of Botany

In this study, archaeobotanical data were gathered from the Early, Middle, and Late Bronze Age layers (2400-1200 BC) of the Tatarlı Höyük exposed in the 2011?2012 excavation seasons in the Ceyhan district of Adana Province were evaluated. In 8 trenches relating to these periods, archaeological contexts such as inside areas, hearths, ovens, middens, ceramic pots, etc., as well as contexts with carbonized plant remains were recovered by using dry and wet sieving methods, corresponding in total to 90 soil samples. The major agricultural plants identified were Triticum monococcum (einkorn wheat), Triticum dicoccum (emmer wheat), Triticum aestivum (bread wheat), Hordeum vulgare …


Role Of More Axillary Growth2 (Max2) Protein In Regulation Of Karrikin And Strigolactone Signalling Pathways, Sarika Singh, Moin Uddin, M. Masroor A. Khan, Sobia Aman Chishti, Sangram Singh, Urooj Hassan Bhatt Jan 2022

Role Of More Axillary Growth2 (Max2) Protein In Regulation Of Karrikin And Strigolactone Signalling Pathways, Sarika Singh, Moin Uddin, M. Masroor A. Khan, Sobia Aman Chishti, Sangram Singh, Urooj Hassan Bhatt

Turkish Journal of Botany

MORE AXILLARY GROWTH 2 (MAX2) is an F-box protein, containing leucine-rich repeats. It is a common regulator in signalling pathways of both karrikin and strigolactone, and has several homologs such as MAX1, MAX3, and MAX4, which play a key role in the biosynthesis of strigolactone. It also interacts with various receptors and repressors of karrikin and strigolactone. Karrikins are a group of plant growth regulators found in the smoke of burning plant material and had the ability to stimulate seed germination, whereas strigolactone is a newly discovered plant hormone that regulates shoot and root branching and plays a vital role …


Effects Of Moderate Drought On Leaf Bulliform Cells Of Aquatic And Coastal Population Of Phragmites Australis, Olena Nedukha Jan 2022

Effects Of Moderate Drought On Leaf Bulliform Cells Of Aquatic And Coastal Population Of Phragmites Australis, Olena Nedukha

Turkish Journal of Botany

Studying leaves of aquatic and terrestrial populations of Phragmites australis grown on the bank of the Venetian strait of the Dnipro River in Kyiv (Ukraine) for establishing the role of bulliform cells in the mechanisms of plant resistance to moderate soil drought were studied. Bulliform (motor) cells participate in the twisting and folding of leaves during drought and strong sunlight. The study of bulliform cells in the leaves of the aquatic and terrestrial populations of P. australis was carried out using the methods of light microscopy, cytochemical methods, laser confocal microscopy, and biochemical methods. The comparative analysis of the structure …


Molecular Analysis Of The Section Sphagnum (Sphagnaceae): First Study On Turkish Bryophytes Using Nucleotide Sequences Of The Trnl Intron Region, Mesut Kirmaci, Asli Semi̇z, Adi̇le Sari, Özden Özgün Acar, Uğur Çatak, Fulya Fi̇li̇z Jan 2022

Molecular Analysis Of The Section Sphagnum (Sphagnaceae): First Study On Turkish Bryophytes Using Nucleotide Sequences Of The Trnl Intron Region, Mesut Kirmaci, Asli Semi̇z, Adi̇le Sari, Özden Özgün Acar, Uğur Çatak, Fulya Fi̇li̇z

Turkish Journal of Botany

The genus Sphagnum is one of the richest taxa among the Turkish bryophytes. Up to now, it has been represented by 27 taxa in six sections (Sphagnum, Acutifolia, Squarrosa, Subsecunda, Cuspidata, and Rigida). In this study, an identification key for the section Sphagnum was prepared, and the section was investigated using phylogenetic analyses, with a main focus on Turkish bryophytes. This study provides the first sequence data of the trnL intron region for five species of the section Sphagnum from Turkey (namely S. centrale, S. divinum, S. medium, S. palustre, and S. papillosum) to be used in future studies and …


Shackletonia Backorii - A New Species Of Lichenised Fungus From James Ross Island (Antarctic Peninsula), Mehmet Gökhan Halici, Mi̇that Güllü, Ekrem Bölükbaşi, Merve Kahraman Yi̇ği̇t Jan 2022

Shackletonia Backorii - A New Species Of Lichenised Fungus From James Ross Island (Antarctic Peninsula), Mehmet Gökhan Halici, Mi̇that Güllü, Ekrem Bölükbaşi, Merve Kahraman Yi̇ği̇t

Turkish Journal of Botany

The new lichen species Shackletonia backorii Halıcı, Güllü & Kahraman is described from James Ross Island, which is located in the North-East Antarctic Peninsula region. The new species is morphologically most similar to S. insignis (Søchting & Øvstedal) Søchting, Frödén & Arup, which was described from Livingstone Island (North-West Antarctic Peninsula region). These two species have a similar bluish grey to blackish thallus with a microfruticose and coralloid structure and red brown or almost black zeorine apothecia, but S. backorii has rhomboid ascospores and grows on soil whereas S. insignis has ellipsoid ascospores and occurs in sheltered crevices of rocks. …


Inocybe Viscida (Inocybaceae: Agaricomycetes), A New Species From Mediterranean Forests Of Turkey, Oğuzhan Kaygusuz, Henning Knudsen, Ditte Bandini, İbrahi̇m Türkekul Jan 2022

Inocybe Viscida (Inocybaceae: Agaricomycetes), A New Species From Mediterranean Forests Of Turkey, Oğuzhan Kaygusuz, Henning Knudsen, Ditte Bandini, İbrahi̇m Türkekul

Turkish Journal of Botany

Inocybe viscida sp. nov., a novel species found in a forest with old trees of Pinus brutia and tertiary relict endemic Liquidambar orientalis in coastal area of southwestern Turkey, is described and illustrated. We present this new species based on morphological and molecular data from nuclear rDNA internal transcribed spacer region (ITS1-5.8SITS2 = ITS) and the portions of nuc 28S rRNA (LSU) gene. Comprehensive description, field photographs, line drawings of the microscopic features and comparisons with phenetically similar taxa and phylogenetically related species are discussed.


Fistulinella Distromatica (Boletaceae, Basidiomycota), A New Bolete From The Atlantic Forest Of Bahia, Brazil, Anderlechi Silva, Ricardo Koroiva, José Bezerra, Felipe Wartchow Jan 2022

Fistulinella Distromatica (Boletaceae, Basidiomycota), A New Bolete From The Atlantic Forest Of Bahia, Brazil, Anderlechi Silva, Ricardo Koroiva, José Bezerra, Felipe Wartchow

Turkish Journal of Botany

Fistulinella distromatica sp. nov. is described based on morphological and molecular data. It is characterized by the following features: pileus surface that is subviscid with appressed, small brownish fribrillose-squamulose; subviscid, minutely subviscid, minutely punctate stipe that is yellow at the base; the relatively large inamyloid spores; hymenial cystidia up to 70 µm long; two-layered stipitipellis with a trichodermal suprastipitipellis and interwoven substipitipellis that is interwoven in a strongly gelatinized matrix. Fistulinella distromatica clusters phylogenetically with a sequence of F. campinaranae var. scrobiculata recorded from Bahia, and in a distinct branch from Colombian Amazon material. Since Bahian specimens are morphologically and …


Allelopathic Potential, Nutritional Qualities, And Responses Of Chenopodium Quinoa (Willd.) To Abiotic Stress Conditions-A Review, Sulaiman Shah, Yaseen Khan Jan 2022

Allelopathic Potential, Nutritional Qualities, And Responses Of Chenopodium Quinoa (Willd.) To Abiotic Stress Conditions-A Review, Sulaiman Shah, Yaseen Khan

Turkish Journal of Botany

Quinoa (Chenopodium quinoa Willd.) is a pseudo cereal crop, which is considered a new alternative crop due to its high nutritional value and tolerance to environmental stresses. Its seeds are rich in proteins and amino acids (e.g., lysine, threonine, and methionine) that are deficient in other pseudo-cereal crops. It also contains essential fatty acids, such as linoleic, and alpha-linolenic acids, and high quantities of vitamins, e.g., riboflavin (B2), and tocopherol (vitamin E), and inorganic nutrients. It has a low glycemic value, is gluten-free, and has high levels of fibre and antioxidants, e.g., alpha- and gamma-tocopherol. In many studies, quinoa …


Molecular Phylogeny And Phylogeography Reveal Recent Divergence In The Iberis Simplex Dc. (Brassicaceae) Species Complex, Emre Çi̇lden, Bariş Özüdoğru Jan 2022

Molecular Phylogeny And Phylogeography Reveal Recent Divergence In The Iberis Simplex Dc. (Brassicaceae) Species Complex, Emre Çi̇lden, Bariş Özüdoğru

Turkish Journal of Botany

According to the current taxonomic delimitation, the Mediterranean genus Iberis comprises about 30 species. Among them, the taxonomy and species delimitation of Iberis simplex and its morphologically close relatives (I. attica, I. carica, I. gypsicola, I. halophila, and I. spruneri), described here as the I. simplex species complex, are controversial and several different names are used for the members of this complex. Past phylogenetic studies did not include the members of this complex and here we present the first comprehensive phylogenetic and phylogeographic study based on nuclear ITS and chloroplast trnL-F regions to …


Genetic Diversity And Population Structure Analysis For Ampelopsis Grossedentata Using Microsatellite Markers, Xiao Ying Li, L Wei Jan 2022

Genetic Diversity And Population Structure Analysis For Ampelopsis Grossedentata Using Microsatellite Markers, Xiao Ying Li, L Wei

Turkish Journal of Botany

Ampelopsis grossedentata is an important national medicine in China. It is mainly used commonly by the Yao, Miao, Dong, and other ethnic minorities of China. The current literature, however, contains no study on the molecular genetics and taxonomy of A. grossedentata, which had led to potential problems in the conservation and utilization of this resource. Therefore, the present study was aimed to use simple sequence repeat (SSR) markers for assessing the levels and the distribution of genetic diversity in a sample set of 225 individuals from nine populations of A. grossedentata in China. The genetic differentiation among the nine …


Lamium Cappadocicum, A New Species From Central Anatolia, Turkey: Evidence From Molecular And Morphological Studies, Ferhat Celep, Fergan Karaer, Bryan T. Drew Jan 2022

Lamium Cappadocicum, A New Species From Central Anatolia, Turkey: Evidence From Molecular And Morphological Studies, Ferhat Celep, Fergan Karaer, Bryan T. Drew

Turkish Journal of Botany

Lamium is a taxonomically convoluted genus of about 34 species. Within Lamium, the L. garganicum species complex is particularly challenging. Here, based on morphological and molecular studies, Lamium cappadocicum Celep & Karaer sp. nova (Lamiaceae) is separated from L. garganicum and L. bilgilii and described as a new species, and L. garganicum subsp. rectum (= L. garganicum subsp. pulchrum) is resurrected. The new species is only known from the Hasan Mountain (Aksaray) in Central Anatolia, Turkey. Lamium cappadocicum is closely related to L. garganicum subsp. rectum but differs from it by its mat-forming caespitose habit, reniform (rarely ovate …


Stachys Istanbulensis (Lamiaceae) A New Species From Turkey: Evidence From Morphological, Micromorphological And Molecular Analysis, Özal Güner Jan 2022

Stachys Istanbulensis (Lamiaceae) A New Species From Turkey: Evidence From Morphological, Micromorphological And Molecular Analysis, Özal Güner

Turkish Journal of Botany

Stachys species show high morphological diversity and their main diagnostic characteristics are calyx and corolla length, ratio of tooth to calyx, and verticillaster arrangement. This manuscript describes and provides detailed morphological, micromorphological and molecular information about a new species, Stachys istanbulensis Ö. Güner, and its close relatives. The new species resembles S. recta complex, but is distinguished by its procumbent flowering stems, shorter calyx and teeth, congested verticillasters, creamy yellow corolla and oblong-obovoid nutlets. Moreover, the periclinal surfaces of S. istanbulensis nutlets are usually wrinkled, while those of S. recta are smooth. In addition, nrITS DNA region sequences were used …


Identification And Characterization Of A Long Fruit Mutant In Cucumis Sativus L., Yajing Hu, Xiaojing Dong, Yana Zhang, Rui Tang, Jiali Li, Chenxing Cao, Chunhua Chen, Zhonghai Ren, Lina Wang Jan 2022

Identification And Characterization Of A Long Fruit Mutant In Cucumis Sativus L., Yajing Hu, Xiaojing Dong, Yana Zhang, Rui Tang, Jiali Li, Chenxing Cao, Chunhua Chen, Zhonghai Ren, Lina Wang

Turkish Journal of Botany

A long fruit (lf) mutant was obtained from the cucumber inbred line 'SN5' by ethyl methanesulfonate (EMS)-mediated mutagenesis. We found that plant height and internode length of lf were significantly decreased, while leaf area was significantly increased in comparison to wild type (WT) plants. Higher carbohydrate level, together with lower chlorophyll content and photosynthetic parameters, was revealed in lf leaves than those of WT. Longer fruits, as well as enhanced fruit quality, were observed for mutant plants in comparison to WT, and the difference in fruit length was continuously increased with the development of fruits. ELISA and real-time PCR analyses …


Assessment Of Genetic Variation Of Natural Populations Of Wild Cherry (Prunus Avium L.)Via Ssr Markers, Burcu Uzan Eken, Emrah Kirdök, Ercan Veli̇oğlu, Yelda Özden Çi̇ftçi̇ Jan 2022

Assessment Of Genetic Variation Of Natural Populations Of Wild Cherry (Prunus Avium L.)Via Ssr Markers, Burcu Uzan Eken, Emrah Kirdök, Ercan Veli̇oğlu, Yelda Özden Çi̇ftçi̇

Turkish Journal of Botany

Wild cherry (Prunus avium L, syn. Cerasus avium L. Moench.) is a widely spread forest tree that has ecological and economical importance. However, the genetic diversity of this species is threatened for many reasons. Therefore, a breeding and conservation program should be established in order to minimise the loss of genetic diversity. In this study, we aimed to understand the genetic structure of 440 individual wild cherries sampled from 22 different populations in Turkey using 10 SSR molecular markers. With the molecular variance analysis, we found that the genetic diversity within the population is approximately 88.5% and the genetic diversity …