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Phylogeny And Taxonomy Of A Novel Species Of Pseudocercospora From India, Archana Singh, Paras Nath Singh, Gopal Nath, Nawal Kishore Dubey Jan 2021

Phylogeny And Taxonomy Of A Novel Species Of Pseudocercospora From India, Archana Singh, Paras Nath Singh, Gopal Nath, Nawal Kishore Dubey

Turkish Journal of Botany

A new species of Pseudocercospora is described causing leaf spot disease on Crotalaria assamica from India. The identity of isolate was based on asexual morphs, cultural characteristics and phylogenetic analyses of partial nuclear ribosomal 28S large subunit and complete internal transcribed spacer rDNA sequence data with high statistical support value. Morphologically this species has characters similar to allied species in genus Pseudocercospora but differs in having catenate and branched conidia. Phylogenetic analysis using LSU and ITS reveals it a new species of >i>Pseudocercospora (Capnodiales, Mycosphaerellaceae).


The Involvement Of The Induction Of Anthocyanin Biosynthesis And Transport In Toxic Boron Responsive Regulation In Arabidopsis Thaliana, Ceyhun Kayihan Jan 2021

The Involvement Of The Induction Of Anthocyanin Biosynthesis And Transport In Toxic Boron Responsive Regulation In Arabidopsis Thaliana, Ceyhun Kayihan

Turkish Journal of Botany

Recently, boron (B) has been found to form a complex with anthocyanin, which could be evidence for the B tolerance mechanisms that reduce free B in the leaf tissues of plants. However, the molecular mechanism of anthocyanin biosynthesis and transport has not been satisfactorily elucidated in plants exposed to toxic B. Therefore, the changes in expression levels of some of the phenylpropanoid pathway genes, early and late flavonoid biosynthetic genes, and transcription factors related to anthocyanin biosynthesis and transport were determined in Arabidopsis thaliana under B toxicity. Accordingly, 1 mM boric acid treatment did not cause any significant change in …


Physiological, Biochemical, And Metabolic Responses Of Abiotic Plant Stress: Salinity And Drought, Kiarash Jamshidi Goharrizi, Michael R. Hamblin, Soraya Karami, Maryam Nazari Jan 2021

Physiological, Biochemical, And Metabolic Responses Of Abiotic Plant Stress: Salinity And Drought, Kiarash Jamshidi Goharrizi, Michael R. Hamblin, Soraya Karami, Maryam Nazari

Turkish Journal of Botany

The most important types of abiotic stress that affect agricultural crops throughout the world are drought and salinity. These stresses will continue to worsen as the current climate crisis progresses. Plants have evolved a complex set of mechanisms in order to protect themselves from salt and drought. At the macrobiological level, these include alterations in growth rate, water balance, antioxidant defenses, and photosynthesis. Altered metabolites include proline, carbohydrates, glycine betaine, gamma-aminobutyric acid, and polyamines. It is not surprising, thus, that one of the most important research areas of plant biology is the study of plant responses to abiotic stress and …


Presowing Seed Treatment With Glycine Betaine Confers Nacl Tolerance In Quinoa Bymodulating Some Physiological Processes And Antioxidant Machinery, Muhammad Faisal Maqsood, Muhammad Shahbaz, Muhammad Arfan, Shahzad Maqsood Ahmed Basra Jan 2021

Presowing Seed Treatment With Glycine Betaine Confers Nacl Tolerance In Quinoa Bymodulating Some Physiological Processes And Antioxidant Machinery, Muhammad Faisal Maqsood, Muhammad Shahbaz, Muhammad Arfan, Shahzad Maqsood Ahmed Basra

Turkish Journal of Botany

Soil salinity threatens the yield and food security worldwide and use of halophytes might be a valid option to cope with devastating salinity effects. The present investigation was accomplished to evaluate the role of glycine betaine (GB) as presowing seed treatment on growth parameters, photosynthetic pigments, gas exchange attributes, enzymatic antioxidants, lipid peroxidation (MDA), hydrogen peroxide (H2 O2 ), endogenous GB, total soluble proteins (TSP), and yield in quinoa (Chenopodium quinoa) under saline conditions. Ames-13737 (Q7) and PI-634919 (Q9) quinoa accessions were used for this trial. The plants were applied with two salt stress treatments (Control and 450 mM NaCl) …


Usefulness Of Palynomorphological Characteristics For The Identification Of Speciescyanus Mill. (Asteraceae) In Turkey: A Taxonomic Approach, Burcu Yilmaz Çitak, Emrah Şi̇ri̇n, Hüseyi̇n Dural, Kuddi̇si̇ Ertuğrul Jan 2021

Usefulness Of Palynomorphological Characteristics For The Identification Of Speciescyanus Mill. (Asteraceae) In Turkey: A Taxonomic Approach, Burcu Yilmaz Çitak, Emrah Şi̇ri̇n, Hüseyi̇n Dural, Kuddi̇si̇ Ertuğrul

Turkish Journal of Botany

Palynological characters of 20 taxa belonging to the Turkish subgenus Cyanus were studied in details using light and scanning electron microscopy. Pollen grains of the subgenus Cyanus were tricolporate or syncolporate, subprolate or prolate-spheroidal, 26.15 to 53 µm in polar size, 22.84 to 46.86 µm in equatorial size, isopolar, and radially symmetrical. The only type of pollen grain ornamentation observed was scabrate-perforate. Principal component analysis and cluster analysis were performed to investigate the relationships of the studied Cyanus taxa. As a result of the phenetic analyses, the polar axis, equatorial axis, colpus length, and apocolpium were found to be significant …


Anthemis Ekicii (Asteraceae), A New Species From Turkey, Mehmet Ufuk Özbek, Hayri̇ Duman, Funda Özbek, Zeki̇ Aytaç Jan 2021

Anthemis Ekicii (Asteraceae), A New Species From Turkey, Mehmet Ufuk Özbek, Hayri̇ Duman, Funda Özbek, Zeki̇ Aytaç

Turkish Journal of Botany

Anthemis ekicii (Asteraceae) is described and illustrated as a new species from Tuz Lake in Aksaray Province in Central Anatolia. The new species belongs to the section Anthemis, and it is closely related to A. pauciloba var. pauciloba, from which it differs in stem, leaves, and capitulum features. Diagnostic characters, description, detailed illustrations, ecology, IUCN conservation status, and pollen and seed morphology are presented in this study.


Nomenclatural And Taxonomic Notes On Some Stachys Taxa (Lamiaceae), Özal Güner, P. Pablo Ferrer-Gallego Jan 2021

Nomenclatural And Taxonomic Notes On Some Stachys Taxa (Lamiaceae), Özal Güner, P. Pablo Ferrer-Gallego

Turkish Journal of Botany

Stachys glechomifolia (Lamiaceae), previously included under S. mardinensis as a synonym, is resurrected in this work based on extensive field and herbarium studies. In addition to its distribution in Turkey, S. mardinensis has firstly been recorded from Iran. Furthermore, the lectotypes of S. fragillima, S. graveolens, and S. kurdica var. brevidens are designated in this study. An expanded description and distribution map of S. glechomifolia, and some taxonomic notes on S. graveolens, S. fragillima, S. mardinensis, and S. nephrophylla are also reported.


Nomenclatural Adjustments For Hybrids Of The Former Inula L. Within Pentanema Cass.(Asteraceae), Alexey P. Seregin Jan 2021

Nomenclatural Adjustments For Hybrids Of The Former Inula L. Within Pentanema Cass.(Asteraceae), Alexey P. Seregin

Turkish Journal of Botany

Drastic recircumscription of Pentanema (Asteraceae) has resulted in transfers of many species from Inula, whereas hybrids with binomials have not received new combinations yet. However, names for interspecific hybrids of Inula auct. are in active current use, and a dozen nothospecies are regularly mentioned in floras, checklists, and research papers. I have facilitated 12 new combinations for nothospecies in Pentanema: P. ×adriaticum (Borbás) Seregin (P. hirtum × P. spiraeifolium), P. ×haussmannii (Huter) Seregin (P. ensifolium × P. hirtum), P. ×hispidum (Schur) Seregin (P. asperum × P. hirtum), P. ×hybridum (Baumg.) Seregin (P. ensifolium × P. germanicum), P. ×litorale (Borbás) Seregin …


Genetic Structure, Differentiation, And Slight Evidence For No Selective Neutrality Of Some Ssr Markers In Populations Of Medicago Ciliaris (L.) Krock And Medicago Intertexta (L.)Mill Species, Fella Abdous, Fatima Zohra Fyad-Lameche Jan 2021

Genetic Structure, Differentiation, And Slight Evidence For No Selective Neutrality Of Some Ssr Markers In Populations Of Medicago Ciliaris (L.) Krock And Medicago Intertexta (L.)Mill Species, Fella Abdous, Fatima Zohra Fyad-Lameche

Turkish Journal of Botany

Medicago ciliaris (L.) Krock and Medicago intertexta (L.) Mill are most often found in saline regions and are considered as potential resources for genes related to salinity resistance. To explore the genetic diversity of these two species by mean of nrSSR (simplesequence repeats) markers, 11 accessions originated from different regions in north of Africa and Middle East were chosen. Ten among 14 markers turned out to be polymorphic and gave 72 alleles. Eight markers were very informative with PIC values > 0.5, and three of them were found to be nonneutral. Allelic richness was limited with an average number of alleles …


Mirnas Involved In Drought Stress In Italian Ryegrass (Lolium Multiflorum L.), Gürkan Demi̇rkol Jan 2021

Mirnas Involved In Drought Stress In Italian Ryegrass (Lolium Multiflorum L.), Gürkan Demi̇rkol

Turkish Journal of Botany

miRNAs have been characterized as a regulator of main processes in plants by silencing genes. The functions of microRNAs have been studied in various crops, hovewer, no studies have been observed about miRNAs in Italian rygrass (Lolium multiflorum L.) against drought stress. This experiment aimed to reveal the involvement of miRNAs against drought stress in sensitive and tolerant Italian ryegrass genotypes. Four genotypes (G1 and G2 as drought sensitive - G3 and G4 as drought tolerant) were selected. The sensitivities of these genotypes against drought stress were verified by performing growth parameters, relative water and proline contents under normal and …


Effect Of Ash Carbon Nanofibers On Gaba Shunt Pathway In Germinating Seeds Of Tomato (Lycopersicon Esculentum Mill., C.V. Rohaba.) Under Salt Stress, Nisreen Alquraan, Mohammed Al-Omari, Alaa Ayoub Jan 2021

Effect Of Ash Carbon Nanofibers On Gaba Shunt Pathway In Germinating Seeds Of Tomato (Lycopersicon Esculentum Mill., C.V. Rohaba.) Under Salt Stress, Nisreen Alquraan, Mohammed Al-Omari, Alaa Ayoub

Turkish Journal of Botany

The aim of the current study was to examine the effect of black ash carbon nanofibers (CNFs) on gamma-aminobutyric acid (GABA) shunt pathway in germinating seeds of tomato (Lycopersicon esculentum Mill., c.v. Rohaba) under salt stress. Seed?s germination pattern, seed moisture content, GABA shunt metabolite levels (GABA, Glutamate and Alanine), total proteins and total carbohydrates, and the level of oxidative damage in response to sodium chloride (NaCl) treatments were determined. A significant increase of moisture content in CNFs treated seeds associated with significant increases in germination percentage was found. Data also showed a significant increase in GABA shunt metabolites in …


Water Conservation Strategies Through Anatomical Traits In The Endangered Arid Zone Species Salvadora Oleoides Decne., Ummar Iqbal, Mansoor Hameed, Farooq Ahmad Jan 2021

Water Conservation Strategies Through Anatomical Traits In The Endangered Arid Zone Species Salvadora Oleoides Decne., Ummar Iqbal, Mansoor Hameed, Farooq Ahmad

Turkish Journal of Botany

Salvadora oleoides Decne. (Salvadoraceae) is a facultative and mesomorphic xerophyte, well adapted to arid and semi-arid regions. Twelve populations were selected from different ecological regions of Punjab to investigate structural modifications that are essential for water conservation, by either improving water-storing capacity or preventing water loss from the plant body, hence, enabling this species to cope with environmental extremities. We observed significant plasticity in structural features, which ensures ecological success in a variety of environmental conditions. Huge variation was seen in various tissue systems, i.e., epidermis and epidermal appendages, collenchyma, size of internal oil glands, storage parenchyma, shape, size and …


In Vitro Physiological Effects Of Origanum Onites L. (Lamiaceae) Essential Oil Treatmenton Human Origin Cell Lines, Gül İpek Gündoğan, Ebru Özdemi̇r Nath Jan 2021

In Vitro Physiological Effects Of Origanum Onites L. (Lamiaceae) Essential Oil Treatmenton Human Origin Cell Lines, Gül İpek Gündoğan, Ebru Özdemi̇r Nath

Turkish Journal of Botany

Origanum onites L. belongs to the Lamiaceae family which is commonly used for symptomatic treatment of the diseases of the gastrointestinal, endocrine, and respiratory systems in Turkish ethnobotanical studies and public. In this study our aim was to investigate the physiological effects of O. onites essential oil (OE) on A549 human lung cancer, MIA PaCa human pancreas cancer and HUVEC human endothelial cell lines. Our findings showed that


High Genetic Diversity Within And Low Differentiation Among Juniperus Excelsa M. Bieb.Populations: Molecular Markers Reveal Their Genetic Structure Patterns, Özay Hasan Evren, Nuray Kaya Jan 2021

High Genetic Diversity Within And Low Differentiation Among Juniperus Excelsa M. Bieb.Populations: Molecular Markers Reveal Their Genetic Structure Patterns, Özay Hasan Evren, Nuray Kaya

Turkish Journal of Botany

J. excelsa M. Bieb forms about 82% of the total juniper forests in Turkey. A total of 456 plant samples belonging to 19 J. excelsa populations were collected to determine the genetic variation of J. excelsa and compare their genetic diversity among populations via simple-sequence repeat (SSR) and intron targeted amplified polymorphism (ITAP) markers. Seven SSR and 132 ITAP loci were polymorphic. The percentage of polymorphism for ITAP loci at the population level ranged from 31.34 to 55.97. Average values of expected heterozygosity, observed heterozygosity, Shannon's information index, Fis, Fst and Nm for SSR loci were 0.616, 0.512, 1.54, 0.124, …


Forage Potential Of Salsola Species In Arid-Saline Rangelands, Hadi Pirasteh-Anosheh, Ali Mirhosseini, Nudrat Aisha Akram, Mirza Hasanuzzaman Jan 2021

Forage Potential Of Salsola Species In Arid-Saline Rangelands, Hadi Pirasteh-Anosheh, Ali Mirhosseini, Nudrat Aisha Akram, Mirza Hasanuzzaman

Turkish Journal of Botany

We investigated the forage potential of 12 Salsola species including S. arbuscula, S. abarghuensis, S. dendroides, S. crassa, S. imbricata, S. incanescens, S. nitraria, S. kerneri, S. orientalis, S. richteri, S. tomentosa, and S. yazdiana in the Southern rangelands of the Great Salt Desert. The results showed a great significant variation among forage quality and quantity of the Salsola species. The greatest fresh and dry forages were obtained in S. yazdiana (4.54 and 1.53 kg m?2, respectively) followed by S. dendroides (3.02 and 1.13 kg m?2, respectively). The S. tomentosa had the greatest ash content by 20.2%, which significantly was …


Toniniopsis Bartakii - A New Species Of Lichenised Fungus From James Ross Island(Antarctic Peninsula), Mehmet Gökhan Halici, Merve Kahraman, Sonja Kistenich, Einar Timdal Jan 2021

Toniniopsis Bartakii - A New Species Of Lichenised Fungus From James Ross Island(Antarctic Peninsula), Mehmet Gökhan Halici, Merve Kahraman, Sonja Kistenich, Einar Timdal

Turkish Journal of Botany

The new lichen species Toniniopsis bartakii is described from James Ross Island, the North-East Antarctic Peninsula region. It is phylogenetically most closely related to T. bagliettoana but differs mainly in forming a more developed, squamulose thallus. It is morphologically more similar to T. coelestina but differs mainly in the pigmentation in the proper exciple. An identification key to the known species of Toniniopsis is also provided


A New Asperula L. (Rubiaceae) Species From Gypsum Steppes Of Çankırı Province In Turkey, Bi̇lal Şahi̇n, Mehmet Sağiroğlu, Bi̇rol Başer Jan 2021

A New Asperula L. (Rubiaceae) Species From Gypsum Steppes Of Çankırı Province In Turkey, Bi̇lal Şahi̇n, Mehmet Sağiroğlu, Bi̇rol Başer

Turkish Journal of Botany

Asperula cankiriense B.Şahin & Sağıroğlu, a new species discovered in the central Anatolian region of Turkey (Çankırı), is described herein. A. cankiriense is similar to Asperula bornmuelleri Velen. However, A. cankiriense differs mainly in its habitus, stem, leaves, and inflorescence features. In this study, the diagnostic morphological features, distribution, habitat and ecology, etymology, conservation status, and taxonomic features of the new species are discussed. Additionally, pollen micromorphological characteristics of A. cankiriense and A. bornmuelleri are examined and compared using light microscopy (LM) and scanning electron microscopy (SEM) analyses. The pollen grains are subprolate, aperture type 6?7 or rarely 8 zonocolpate …


Volvopluteus And Pluteus Section Pluteus (Agaricales: Pluteaceae) In Turkey Based Onmorphological And Molecular Data, Oğuzhan Kaygusuz, İbrahi̇m Türkekul, Henning Knudsen, Nelson Menolli Jr. Jan 2021

Volvopluteus And Pluteus Section Pluteus (Agaricales: Pluteaceae) In Turkey Based Onmorphological And Molecular Data, Oğuzhan Kaygusuz, İbrahi̇m Türkekul, Henning Knudsen, Nelson Menolli Jr.

Turkish Journal of Botany

Pluteus and Volvopluteus are two closely related genera of Pluteaceae that comprise saprotrophic fungi. Although the genera have been well-studied in Europe and North and South America, the diversity of Pluteus, mainly Pluteus sect. Pluteus, and Volvopluteus in Turkey is poorly known due to insufficient morphological descriptions and a lack of DNA sequence data. In this study, the diversity of Pluteus sect. Pluteus and Volvopluteus in Turkey is evaluated by employing both morphological features and phylogenetic approaches. A general phylogeny of Pluteus sect. Pluteus based on sequences of nuc rDNA internal transcribed spacer (ITS1-5.8S-ITS2 = ITS) region is presented and …


Applications Of Crispr/Cas9-Based Genome Editing In The Plant Biology, Yingzhuan Zheng, Qianqian Li, Mingwang Ye, Aie Cehn, Hongyang Wang Jan 2021

Applications Of Crispr/Cas9-Based Genome Editing In The Plant Biology, Yingzhuan Zheng, Qianqian Li, Mingwang Ye, Aie Cehn, Hongyang Wang

Turkish Journal of Botany

Clustered regularly interspaced short palindromic repeats/CRISPR-associated proteins (CRISPR/Cas) is an acquired immune system found in bacteria and archaea that can specifically silence or degrade a foreign single or double strand nucleic acid to protect it from infection. In recent years, the CRISPR/Cas9 system has rapidly been evolved into a genome editing technology, in which the Cas9 endonuclease can be targeted to specific DNA sequences by guide RNAs (gRNAs) that are easily programmable. Due to simplicity, specificity and high efficiency, CRISPR/Cas9 is gradually replacing other gene editing technologies and has been implemented in basic and applied plant sciences to boost yield, …


Traditional Herbal Remedies Used In Kidney Diseases In Turkey: An Overview, Şükran Kültür, Bahar Gürdal, Aynur Sari, Gülay Meli̇koğlu Jan 2021

Traditional Herbal Remedies Used In Kidney Diseases In Turkey: An Overview, Şükran Kültür, Bahar Gürdal, Aynur Sari, Gülay Meli̇koğlu

Turkish Journal of Botany

Ethnobotanical and ethnomedicinal studies have become increasingly recognised as a valuable source of information on the use and possible pharmacological activity of many plant species. There is no study presenting traditional herbal remedies used for kidney diseases in Turkey. The purpose of the paper is to compile herbal remedies used in kidney diseases in Turkey with detailed usage information and chemical constituents. The botanical names, families, and local names; used parts; preparation methods; administration/ dosage; kidney problems and chemical constituents were presented by screening ethnobotanical, ethnomedicinaland phytochemical studies. The most cited plant families, the most cited genera, and the most …


Phylogenetic Relationships Among Mexican Species Of The Genus Sechium (Cucurbitaceae), Luis Ángel Barrera Guzmán, Juan Porfirio Legaria Solano, Jorge Cadena Iñiguez, Jaime Sahagún Castellanos Jan 2021

Phylogenetic Relationships Among Mexican Species Of The Genus Sechium (Cucurbitaceae), Luis Ángel Barrera Guzmán, Juan Porfirio Legaria Solano, Jorge Cadena Iñiguez, Jaime Sahagún Castellanos

Turkish Journal of Botany

The genus Sechium includes 11 species, which are highly related to the genus Sicyos. Sechium is native to Mesoamerica, but only S. edule and S. tacaco have been domesticated. Sechium edule is the most exploited species of the genus due to its broad phenotypic variability. A total of 68 samples from the species S. chinantlense, S. compositum, S.hintonii and S.edule were evaluated, as well as their respective varietal complexes (albus, nigrum and virens groups), thereby amplifying the loci of mitochondrial DNA (CoxIII), chloroplast DNA (rbcL) and the nuclear ribosomal ITS1-5.8S-ITS2 region. This was done with the aim of establishing phylogenetic …


Genetic Variation And Population Differentiation Of Dorystaechas Hastata Toturkey: Implications For Conservation Management, Ceren Seli̇m, Songül Sever Mutlu, Nedi̇m Mutlu, İsmai̇l Gökhan Deni̇z, Hasan Meydan Jan 2021

Genetic Variation And Population Differentiation Of Dorystaechas Hastata Toturkey: Implications For Conservation Management, Ceren Seli̇m, Songül Sever Mutlu, Nedi̇m Mutlu, İsmai̇l Gökhan Deni̇z, Hasan Meydan

Turkish Journal of Botany

Dorystaechas hastata is a relict endemic medicinal and aromatic plant under risk of extinction. Assessment of genetic diversity and association between geographic distribution and genetic variation could benefit to the conservation efforts. The objectives of this study were to assess genetic diversity and population differentiation of the species in its natural habitat. The genetic structure of 56 accessions sampled from 15 populations encompassing whole natural distribution of the species were analyzed with both sequencerelated amplified polymorphism (SRAP) and inter-primer binding site (iPBS) molecular markers. The 146 polymorphic markers were generated by 13 SRAP and 11 iPBS primers. The similarity of …


Evaluation Of Bermudagrass [Cynodon (L.) Rich] Accessions With Different Ploidy Levels, Cansu Bülbül, Songül Sever Mutlu, Nedi̇m Mutlu, Osman Gülşen Jan 2021

Evaluation Of Bermudagrass [Cynodon (L.) Rich] Accessions With Different Ploidy Levels, Cansu Bülbül, Songül Sever Mutlu, Nedi̇m Mutlu, Osman Gülşen

Turkish Journal of Botany

Eastern Mediterranean is considered as a center of diversity of


Concomitant Accumulations Of Ions, Osmoprotectants And Antioxidant System-Relatedsubstances Provide Salt Tolerance Capability To Succulent Extreme-Halophyte Scorzonera Hieraciifolia, Cansu Altuntaş, Rabi̇ye Terzi̇ Jan 2021

Concomitant Accumulations Of Ions, Osmoprotectants And Antioxidant System-Relatedsubstances Provide Salt Tolerance Capability To Succulent Extreme-Halophyte Scorzonera Hieraciifolia, Cansu Altuntaş, Rabi̇ye Terzi̇

Turkish Journal of Botany

Halophytes adapting to live in salinized areas can activate some tolerance mechanism through signal compounds to cope with salinity. However, the role of co-activity of signal compounds in salt tolerance of halophytes has not yet fully understood. We researched the changes in signal compounds involved in the salt tolerance mechanism, including inorganic ions, osmoprotectants and substances related to the antioxidant system in


A New Species Of Foliicolous Lichenized Fungi From Southwest China: Calopadia Ruiliensissp. Nov., Hai-Xia Wu, Wei-Bin Ren, Xin-Hao Li, Zi-Xiang Yang Jan 2021

A New Species Of Foliicolous Lichenized Fungi From Southwest China: Calopadia Ruiliensissp. Nov., Hai-Xia Wu, Wei-Bin Ren, Xin-Hao Li, Zi-Xiang Yang

Turkish Journal of Botany

Calopadia ruiliensis, found on living leaves in southwest China, is described as a new species, based on morphology and phylogenetic analysis. It is characterized by a foliicolous thallus with yellow greenish to creamy yellow color, rounded apothecia with nonpruinose to thinly pruinose disc, a dark olive-green hypothecium and black-brown subhymenium, and 1-spored asci producing muriform ascospores. Phylogenetic analysis of LSU sequence data shows that the new species clusters in the genus Calopadia with high bootstrap support. The new species is compared with closely related and similar species of Calopadia and a comprehensive description and micrographs are provided.


Bioassessment Of Water Quality Of Surface Waters Using Diatom Metrics, Abuzer Çelekli̇, Haciömer Lekesi̇z, Mehmet Yavuzatmaca Jan 2021

Bioassessment Of Water Quality Of Surface Waters Using Diatom Metrics, Abuzer Çelekli̇, Haciömer Lekesi̇z, Mehmet Yavuzatmaca

Turkish Journal of Botany

Bioassessment of surface waters is one of the most important approaches to predict the deterioration of ecosystems and achieve environmental sustainability according to the application of the European Water Framework Directive. The present review emphasizes the importance of the bioassessment of freshwater quality especially running waters based on diatom metrics. Nutrient enrichment and hydromorphological alternation driven by human activities are the main factors for the ecological compromise of freshwater ecosystems. Currently, the bioassessment of the ecological condition of inland water bodies is adopted worldwide. Bioassessment is complementary to physicochemical and hydromorphological data for evaluating the ecological conditions of rivers; however, …


Investigation Of The Effects Of Overexpression Of Novel_105 Mirna In Contrasting Potatocultivars During Separate And Combined Drought And Heat Stresses, Meli̇s Yalçin, Zahi̇de Nesli̇han Öztürk Gökçe Jan 2021

Investigation Of The Effects Of Overexpression Of Novel_105 Mirna In Contrasting Potatocultivars During Separate And Combined Drought And Heat Stresses, Meli̇s Yalçin, Zahi̇de Nesli̇han Öztürk Gökçe

Turkish Journal of Botany

Potato (Solanum tuberosum L.) growth, development and production are sensitive to abiotic stress conditions, yet studies about investigation of stress response of potato plants in regulation of gene expression level are limited. The aim of this study was to identify the role of newly identified Novel_105 miRNA in contrasting potato cultivars (tolerant Unica and sensitive Russet Burbank) in response to heat, drought and combined heat and drought stresses using transgenic approach. Transgenic plants of Unica and Russet Burbank were generated with overexpression of pre-miRNA of Novel_105 and both wild type and transgenic T0 lines were subjected to stress. Physiological parameters …


Chaetocin Enhances Callus Induction By Decreasing The Expression Of Major Leaf Polarity Genes In Nicotiana Tabacum, Ayyub Ebrahimi, Nagi̇han Özsoy, Saadet Deni̇z Gürle, Baki̇ Yaman, Şule Ari Jan 2021

Chaetocin Enhances Callus Induction By Decreasing The Expression Of Major Leaf Polarity Genes In Nicotiana Tabacum, Ayyub Ebrahimi, Nagi̇han Özsoy, Saadet Deni̇z Gürle, Baki̇ Yaman, Şule Ari

Turkish Journal of Botany

Using chemicals known as inhibitors of chromatin remodeling enzymes is a useful approach in understanding the regulation machinery that contributes to the maintenance of or conversion to a pluri- and totipotent states of the cells in multicellular organisms. They can serve as tools to reveal the molecular and cellular mechanisms required for reprogramming. A deeper understanding of reprogramming pathways that drive the cell into a dedifferentiated state might help us enhance plant micropropagation and green biotechnology applications. Chaetocin is one of the histone methyltransferase inhibitors known as key drivers in several cellular processes. It was shown that chaetocin enhanced the …


Integrating Indicators Of Natural Regeneration, Enrichment Planting, Above-Ground Carbonstock, Micro-Climate And Soil To Asses Vegetation Succession In Postmining Reclamation Intropical Forest, Trimanto Trimanto, Lia Hapsari, Sugeng Budiharta Jan 2021

Integrating Indicators Of Natural Regeneration, Enrichment Planting, Above-Ground Carbonstock, Micro-Climate And Soil To Asses Vegetation Succession In Postmining Reclamation Intropical Forest, Trimanto Trimanto, Lia Hapsari, Sugeng Budiharta

Turkish Journal of Botany

Open-cast mining in tropical forests causes negative impacts on biodiversity and carbon storage. Postmining reclamation is therefore imposed to recover the vegetation despite the lack of understanding which indicators can be used to monitor the progress ofsuccession. This study proposes an integrated framework to assess the trajectory of vegetation succession in coal mining site in East Kalimantan, Borneo. We combine the indicators of floristic diversity of naturally growing terrestrial and epiphytic plants, survival and growth of enrichment planting of native plants, above-ground carbon stock of pioneer trees, and the measurements on micro-climate and soil conditions. We compare some indicators across …


Running Sigmas Analysis Of Sampled Molecular Paraphyly In Pottiaceae (Bryophyta), Richard Zander Jan 2021

Running Sigmas Analysis Of Sampled Molecular Paraphyly In Pottiaceae (Bryophyta), Richard Zander

Turkish Journal of Botany

A spreadsheet dealing with standard deviations allows statistical examination of continuous variables associated with paraphyly in systematics, with examples in the Pottiaceae (Bryophyta). Outlier values in taxonomic representation of distribution with the structure of (w-)x-y(-z) of continuous variables can be empirically supported. The use of the geometric mean and intuitional estimation is reexamined. Published reports of the distance between maximally distant exemplars of individual paraphyletic species in molecular cladograms in several studies were reevaluated as metadata. Levels of standard deviations were assigned with the Running Sigmas spreadsheet. A spike in width of exemplars of a paraphyletic species of a moss …