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Botany

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Morphology

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Combined Morphological And Molecular Phylogeny Of The Clusioid Clade (Malpighiales) And The Placement Of The Ancient Rosid Macrofossil Paleoclusia, Brad Ruhfel, Peter Stevens, Charles Davis Dec 2012

Combined Morphological And Molecular Phylogeny Of The Clusioid Clade (Malpighiales) And The Placement Of The Ancient Rosid Macrofossil Paleoclusia, Brad Ruhfel, Peter Stevens, Charles Davis

Brad R. Ruhfel

Premise of research. The clusioid clade is a member of the large rosid order Malpighiales and contains∼1900 species in five families: Bonnetiaceae, Calophyllaceae, Clusiaceae sensu stricto (s.s.), Hypericaceae, and Podostemaceae. Despite recent efforts to clarify their phylogenetic relationships using molecular data, no such data are available for several critical taxa, including especially Hypericum ellipticifolium (previously recognized in Lianthus), Lebrunia, Neotatea, Thysanostemon, and the second-oldest rosid fossil (∼90 Ma), Paleoclusia chevalieri. Here, we (i) assess congruence between phylogenies inferred from morphological and molecular data, (ii) analyze morphological and molecular data simultaneously to place taxa lacking molecular data, and (iii) use ancestral …


Cladistic Relationships Of Aechmea (Bromeliaceae, Bromelioideae) And Allied Genera, A.P.G. De Faria, T. Wendt, Gregory K. Brown Jun 2012

Cladistic Relationships Of Aechmea (Bromeliaceae, Bromelioideae) And Allied Genera, A.P.G. De Faria, T. Wendt, Gregory K. Brown

Gregory K Brown

Aechmea (ca. 220 species) is the largest and most diverse genus in Bromelioideae (Bromeliaceae), and several dissimilar generic concepts and infrageneric classifications have been proposed, frequently involving other closely related Bromelioideae. A morphology-based phylogenetic analysis using parsimony was conducted with 86 taxa, including 52 Aechmea (7 of the 8 recognized subgenera represented) and 34 exemplars from 9 closely related genera as the ingroup. Two species of Cryptanthus were included as the outgroup. The main objectives were to assess the validity of the major infrageneric classification systems proposed for Aechmea and to elucidate the phylogenetic position of Aechmea and putatively related …


Phylogeny Of The Clusioid Clade (Malpighiales): Evidence From The Plastid And Mitochonrial Genomes, Brad R. Ruhfel, Volker Bittrich, Claudia A. Bove, Mats H.G. Gustafsson, C. Thomas Philbrick, Rolf Rutsihauser, Zhenxiang Xi, Charles C. Davis Dec 2010

Phylogeny Of The Clusioid Clade (Malpighiales): Evidence From The Plastid And Mitochonrial Genomes, Brad R. Ruhfel, Volker Bittrich, Claudia A. Bove, Mats H.G. Gustafsson, C. Thomas Philbrick, Rolf Rutsihauser, Zhenxiang Xi, Charles C. Davis

Brad R. Ruhfel

• Premise of the study : The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae s.s., Hypericaceae, and Podostemaceae) represented by 94 genera and ~1900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. We conducted a taxon-rich multigene phylogenetic analysis of the clusioids to clarify phylogenetic relationships in this clade.

• Methods : We analyzed plastid ( matK , ndhF , and rbcL ) and mitochondrial ( matR ) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included 194 …