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Biology

Biology Faculty Research and Scholarship

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2021

Data harmonization

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Ecocomdp: A Flexible Data Design Pattern For Ecological Community Survey Data, Margaret O'Brien, Colin A. Smith, Eric R. Sokol, Corinna Gries, Nina Lany, Sydne Record, Max C. N. Castorani Jan 2021

Ecocomdp: A Flexible Data Design Pattern For Ecological Community Survey Data, Margaret O'Brien, Colin A. Smith, Eric R. Sokol, Corinna Gries, Nina Lany, Sydne Record, Max C. N. Castorani

Biology Faculty Research and Scholarship

The idea of harmonizing data is not new. Decades of amassing data in databases according to community standards - both locally and globally - have been more successful for some research domains than others. It is particularly difficult to harmonize data across studies where sampling protocols vary greatly and complex environmental conditions need to be understood to apply analytical methods correctly. However, a body of longterm ecological community observations is increasingly becoming publicly available and has been used in important studies. Here, we discuss an approach to preparing harmonized community survey data by an environmental data repository, in collaboration with …