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Full-Text Articles in Life Sciences
Applied Soft Classes And Fuzzy Confusion In A Patchwork Semi-Arid Ecosystem: Stitching Together Classification Techniques To Preserve Ecologically-Meaningful Information, Josh Enterkine, T. Trevor Caughlin, Hamid Dashti, Nancy F. Glenn
Applied Soft Classes And Fuzzy Confusion In A Patchwork Semi-Arid Ecosystem: Stitching Together Classification Techniques To Preserve Ecologically-Meaningful Information, Josh Enterkine, T. Trevor Caughlin, Hamid Dashti, Nancy F. Glenn
Biology Faculty Publications and Presentations
Dryland ecosystems have complex vegetation communities, including subtle transitions between communities and heterogeneous coverage of key functional groups. This complexity challenges the capacity of remote sensing to represent land cover in a meaningful way. Many remote sensing methods to map vegetation in drylands simplify fractional cover into a small number of functional groups that may overlook key ecological communities. Here, we investigate a remote sensing process that further advances our understanding of the link between remote sensing and ecologic community types in drylands. We propose a method using k-means clustering to establish soft classes of vegetation cover communities from detailed …
Drone Imagery Protocols To Map Vegetation Are Transferable Between Dryland Sites Across An Elevational Gradient, Anna Roser, Josh Enterkine, Juan M. Requena-Mullor, Nancy F. Glenn, Alex R. Boehm, Marie-Anne De Graaff, Patrick E. Clark, Fred Pierson, T. Trevor Caughlin
Drone Imagery Protocols To Map Vegetation Are Transferable Between Dryland Sites Across An Elevational Gradient, Anna Roser, Josh Enterkine, Juan M. Requena-Mullor, Nancy F. Glenn, Alex R. Boehm, Marie-Anne De Graaff, Patrick E. Clark, Fred Pierson, T. Trevor Caughlin
Biology Faculty Publications and Presentations
The structure and composition of plant communities in drylands are highly variable across scales, from microsites to landscapes. Fine spatial resolution field surveys of dryland plants are essential to unravel the impact of climate change; however, traditional field data collection is challenging considering sampling efforts and costs. Unoccupied aerial systems (UAS) can alleviate this challenge by providing standardized measurements of plant community attributes with high resolution. However, given widespread heterogeneity in plant communities in drylands, and especially across environmental gradients, the transferability of UAS imagery protocols is unclear. Plant functional types (PFTs) are a classification scheme that aggregates the diversity …
Optimizing Process-Based Models To Predict Current And Future Soil Organic Carbon Stocks At High-Resolution, Marie-Anne De Graaff, Ryan Will
Optimizing Process-Based Models To Predict Current And Future Soil Organic Carbon Stocks At High-Resolution, Marie-Anne De Graaff, Ryan Will
Biology Faculty Publications and Presentations
From hillslope to small catchment scales (< 50 km2), soil carbon management and mitigation policies rely on estimates and projections of soil organic carbon (SOC) stocks. Here we apply a process-based modeling approach that parameterizes the MIcrobial-MIneral Carbon Stabilization (MIMICS) model with SOC measurements and remotely sensed environmental data from the Reynolds Creek Experimental Watershed in SW Idaho, USA. Calibrating model parameters reduced error between simulated and observed SOC stocks by 25%, relative to the initial parameter estimates and better captured local gradients in climate and productivity. The calibrated parameter ensemble was used to produce spatially continuous, high-resolution (10 m …
Food Quality, Security, And Thermal Refuge Influence The Use Of Microsites And Patches By Pygmy Rabbits (Brachylagus Idahoensis) Across Landscapes And Seasons, Peter J. Olsoy, Charlotte R. Milling, Jordan D. Nobler, Meghan J. Camp, Lisa A. Shipley, Jennifer S. Forbey, Janet L. Rachlow, Daniel H. Thornton
Food Quality, Security, And Thermal Refuge Influence The Use Of Microsites And Patches By Pygmy Rabbits (Brachylagus Idahoensis) Across Landscapes And Seasons, Peter J. Olsoy, Charlotte R. Milling, Jordan D. Nobler, Meghan J. Camp, Lisa A. Shipley, Jennifer S. Forbey, Janet L. Rachlow, Daniel H. Thornton
Biology Faculty Publications and Presentations
How intensely animals use habitat features depends on their functional properties (i.e., how the feature influences fitness) and the spatial and temporal scale considered. For herbivores, habitat use is expected to reflect the competing risks of starvation, predation, and thermal stress, but the relative influence of each functional property is expected to vary in space and time. We examined how a dietary and habitat specialist, the pygmy rabbit (Brachylagus idahoensis), used these functional properties of its sagebrush habitat—food quality, security, and thermal refuge—at two hierarchical spatial scales (microsite and patch) across two seasons (winter and summer). At the …
Monitoring Tropical Forest Succession At Landscape Scales Despite Uncertainty In Landsat Time Series, T. Trevor Caughlin, Cristina Barber, Gregory P. Asner, Nancy F. Glenn, Stephanie A. Bohlaman, Chris H. Wilson
Monitoring Tropical Forest Succession At Landscape Scales Despite Uncertainty In Landsat Time Series, T. Trevor Caughlin, Cristina Barber, Gregory P. Asner, Nancy F. Glenn, Stephanie A. Bohlaman, Chris H. Wilson
Biology Faculty Publications and Presentations
Forecasting rates of forest succession at landscape scales will aid global efforts to restore tree cover to millions of hectares of degraded land. While optical satellite remote sensing can detect regional land cover change, quantifying forest structural change is challenging. We developed a state-space modeling framework that applies Landsat satellite data to estimate variability in rates of natural regeneration between sites in a tropical landscape. Our models work by disentangling measurement error in Landsat-derived spectral reflectance from process error related to successional variability.We applied our modeling framework to rank rates of forest succession between 10 naturally regenerating sites in Southwestern …
Fearscapes: Mapping Functional Properties Of Cover For Prey With Terrestrial Lidar, Peter J. Olsoy, Jennifer S. Forbey, Janet L. Rachlow, Jordan D. Nobler, Nancy F. Glenn, Lisa A. Shipley
Fearscapes: Mapping Functional Properties Of Cover For Prey With Terrestrial Lidar, Peter J. Olsoy, Jennifer S. Forbey, Janet L. Rachlow, Jordan D. Nobler, Nancy F. Glenn, Lisa A. Shipley
Biology Faculty Publications and Presentations
Heterogeneous vegetation structure can create a variable landscape of predation risk—a fearscape—that influences the use and selection of habitat by animals. Mapping the functional properties of vegetation that influence predation risk (e.g., concealment and visibility) across landscapes can be challenging. Traditional ground-based measures of predation risk are location specific and limited in spatial resolution. We demonstrate the benefits of terrestrial laser scanning (TLS) to map the properties of vegetation structure that shape fearscapes. We used TLS data to estimate the concealment of prey from multiple vantage points, representing predator sightlines, as well as the visibility of potential predators from the …