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Full-Text Articles in Life Sciences
Transcendental Thermodynamics, Richard E. Morel, George Fleck
Transcendental Thermodynamics, Richard E. Morel, George Fleck
Kahn Institute Projects
Thermodynamics is often viewed as a narrow, introspective discipline, trapped by its origins in the 18th and 19th centuries. By dramatic contrast, we show that the Fourth Law of Thermodynamics provides explanations and interpretations of all natural events, extending across artificial boundaries of tradition- al academic disciplines. The Fourth Law of Thermodynamics states that far-from-equilibrium systems increase entropy at the maximum rate available to them. This broadly inclusive paradigm applies to systems from molecules, to organisms, to the biosphere. The Fourth Law is the Law of Evolution. All systems that communicate with their environment exhibit self-organization and self-optimization, enabling the …
Drag Reduction In Wave-Swept Macroalgae: Alternative Strategies And New Predictions, Patrick T. Martone, Laurie Kost, Michael L. Boller
Drag Reduction In Wave-Swept Macroalgae: Alternative Strategies And New Predictions, Patrick T. Martone, Laurie Kost, Michael L. Boller
Biology Faculty/Staff Publications
Premise of the study: Intertidal macroalgae must resist extreme hydrodynamic forces imposed by crashing waves. How does frond flexibility mitigate drag, and how does flexibility affect predictions of drag and dislodgement in the field? Methods: We characterized flexible reconfiguration of six seaweed species in a recirculating water flume, documenting both shape change and area reduction as fronds reorient. We then used a high-speed gravity-accelerated water flume to test our ability to predict drag under waves based on extrapolations of drag recorded at slower speeds. We compared dislodgement forces to drag forces predicted from slow- and high-speed data to generate new …
Proteins: Form And Function, Roy D. Sleator
Proteins: Form And Function, Roy D. Sleator
Department of Biological Sciences Publications
An overwhelming array of structural variants has evolved from a comparatively small number of protein structural domains; which has in turn facilitated an expanse of functional derivatives. Herein, I review the primary mechanisms which have contributed to the vastness of our existing, and expanding, protein repertoires. Protein function prediction strategies, both sequence and structure based, are also discussed and their associated strengths and weaknesses assessed.
Evolution Of Plant Sucrose Uptake Transporters, Anke Reinders, Alicia B. Sivitz, John M. Ward
Evolution Of Plant Sucrose Uptake Transporters, Anke Reinders, Alicia B. Sivitz, John M. Ward
Dartmouth Scholarship
In angiosperms, sucrose uptake transporters (SUTs) have important functions especially in vascular tissue. Here we explore the evolutionary origins of SUTs by analysis of angiosperm SUTs and homologous transporters in a vascular early land plant, Selaginella moellendorffii, and a non-vascular plant, the bryophyte Physcomitrella patens, the charophyte algae Chlorokybus atmosphyticus, several red algae and fission yeast, Schizosaccharomyces pombe. Plant SUTs cluster into three types by phylogenetic analysis. Previous studies using angiosperms had shown that types I and II are localized to the plasma membrane while type III SUTs are associated with vacuolar membrane. SUT homologs were …
Divergent Functions Of The Myotubularin (Mtm) Homologs Atmtm1 And Atmtm2 In Arabidopsis Thaliana: Evolution Of The Plant Mtm Family, Yong Ding, Ivan Ndamukong, Yang Zhao, Yuannan Xia, Jean-Jack Riethoven, David R. Jones, Nullin Divecha, Zoya Avramova
Divergent Functions Of The Myotubularin (Mtm) Homologs Atmtm1 And Atmtm2 In Arabidopsis Thaliana: Evolution Of The Plant Mtm Family, Yong Ding, Ivan Ndamukong, Yang Zhao, Yuannan Xia, Jean-Jack Riethoven, David R. Jones, Nullin Divecha, Zoya Avramova
School of Biological Sciences: Faculty Publications
Myotubularin and myotubularin-related proteins are evolutionarily conserved in eukaryotes. Defects in their function result in muscular dystrophy, neuronal diseases, and leukemia in humans. In contrast to the animal lineage, where genes encoding both active and inactive myotubularins (phosphoinositide 3-phosphatases) have appeared and proliferated in the basal metazoan group, myotubularin genes are not found in the unicellular relatives of green plants. However, they are present in land plants encoding proteins highly similar to the active metazoan enzymes. Despite their remarkable structural conservation, plant and animal myotubularins have significantly diverged in their functions. While loss of myotubularin function causes severe disease phenotypes …
Prospects For The Study Of Evolution In The Deep Biosphere, Jennifer F. Biddle, Jason B. Sylvan, William J. Brazelton, Katina J. Edwards, Craig L. Moyer, John F. Heidelberg, William C. Nelson
Prospects For The Study Of Evolution In The Deep Biosphere, Jennifer F. Biddle, Jason B. Sylvan, William J. Brazelton, Katina J. Edwards, Craig L. Moyer, John F. Heidelberg, William C. Nelson
Biology Faculty and Staff Publications
Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times, and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in …
Evolving Possibilities: Postembryonic Axial Elongation In Salamanders With Biphasic (Eurcyea Cirrigera, Eurycea Longicauda, Eurycea Quadridigitata) And Paedomorphic Life Cycles (Eurycea Nana And Ambystoma Mexicanum), Janet L. Vaglia, Kurt White '09, Alison Case '09
Evolving Possibilities: Postembryonic Axial Elongation In Salamanders With Biphasic (Eurcyea Cirrigera, Eurycea Longicauda, Eurycea Quadridigitata) And Paedomorphic Life Cycles (Eurycea Nana And Ambystoma Mexicanum), Janet L. Vaglia, Kurt White '09, Alison Case '09
Biology Faculty publications
Typically, the number of vertebrae an organism will have postembryonically is determined during embryogenesis via the development of paired somites. Our research investigates the phenomenon of postembryonic vertebral addition in salamander tails. We describe body and tail growth and patterns of postsacral vertebral addition and elongation in context with caudal morphology for four plethodontids ( Eurycea) and one ambystomatid. Eurycea nana and Ambystoma mexicanum have paedomorphic life cycles; Eurcyea cirrigera, Eurycea longicauda and Eurycea quadridigitata are biphasic. Specimens were collected, borrowed and/or purchased, and cleared and stained for bone and cartilage. Data collected include snout-vent length (SVL), tail length (TL), …