Life Sciences Commons^™

Oligomerization Of The Sterile-2 G-Protein Coupled Receptor In Yeast Cells In The Presence And Absence Of Alpha-Factor Pheromone Using Fluorescence Spectroscopy And Forster Resonance Energy Transfer Analysis, Joel David Paprocki

Theses and Dissertations

G-protein-coupled receptors (GPCRs) are the largest family of receptors that respond to a wide variety of extracellular stimuli, including molecular ligands such as odorants, neurotransmitters, and hormones, as well as physical agents sigh as light and pressure. The stimulation event results in initiating conformational changes in the structure of the receptor, which further results in the release of the heterotrimeric G-protein; the latter has a variety of functions within signaling pathways in cellular biology. The GPCR explored in this investigation is the Sterile 2 α-factor receptor (Ste2), whose natural function is that of a yeast mating pheromone receptor. Its natural …

Part I: Synthesis And Biological Evaluations Of Potent Class L Selective Histone Deacetylase Inhibitors Part Ii: Aqueous Complexes For Efficient Sizebased Separation Of Americium From Curium Part Iii: Designing Strong Chiral Bronsted Acids And Their Application For Oxaxinanones Derivatization And The Aza-Henry Reaction, Joseph Steve Ulicki

Theses and Dissertations

PART I: SYNTHESIS AND BIOLOGICAL EVALUATIONS OF POTENT CLASS l SELECTIVE HISTONE DEACETYLASE INHIBITORS

Histone deacetylase inhibitors (HDACi) have found a wide variety of medicinal uses and are most noted for their specific apoptotic action towards cancer cells1. Several hydroxamates and tetrapeptides HDACi have since been moved on to phase 1 and 2 clinical trials, with FK228 & SAHA having already been approved for treatment of advanced cutaneous T-cell lymphoma (CTCL). FK228 & SAHA are pan-HDACi which d compounds describes the unselective inhibition for any of the 11 Zn2+-dependent HDAC isoforms. Research in the past five years, has shifted towards …

Interaction Of Rhizobium Sp. Strain Irbg74 With A Legume (Sesbania Cannabina) And A Cereal (Oryza Sativa), Shubhajit Mitra

Theses and Dissertations

Rhizobium sp. IRBG74 (IRBG74) develops a classical nitrogen-fixing symbiosis with the legume Sesbania cannabina and also promotes the growth of rice (Oryza sativa), but not much is known about the rhizobial determinants important for these interactions. We hypothesize that Rhizobium sp. IRBG74 utilizes similar mechanisms to endophytically colonize both legume and cereal hosts. In this study, we analyzed the colonization of rice and S. cannabina using a strain of IRBG74 marked with β-glucuronidase (GUS) and Green Fluorescent Protein (GFP). IRBG74 infected both of the host plants through crack entry under submerged conditions, but showed root hair mediated infection under aerobic …

Gene Regulatory Pathways Driving Central Nervous System Regeneration In Zebrafish, Ishwariya Venkatesh

Theses and Dissertations

Damage to the central nervous system (CNS) circuitry of adult mammals results in permanent disability. In contrast, the ability to regenerate damaged CNS nerves and achieve functional recovery occurs naturally in fish. The ability of fish to successfully regrow damaged CNS nerves is in part a consequence of their ability to re-express key neuronal growth-associated genes/proteins in response to CNS injury. On such protein is Growth-Associated Protein-43 (Gap43), a protein which is highly enriched in axonal growth cones during CNS development and regeneration. Experiments conducted in mammals have demonstrated that ectopic expression of GAP-43 improves axonal re-growth after injury. Using …

Zebrafish As A Model For Determining The Mechanisms Causing Deafness In Myh9-Related Disease, Luke David Spychalla

Theses and Dissertations

Approximately 1 in 500 infants are diagnosed with hearing loss, and about half of these cases can be traced to genetic defects. Several hundred genes have been implicated in deafness, including MYH9, which codes for the conventional motor protein non-muscle myosin IIA (NMIIA). Mutations in MYH9 lead to syndromic MYH9-related diseases, which include deafness as a variable symptom, as well as non-syndromic autosomal deafness DFNA17. Despite its identification as a deafness gene, the functions of MYH9 in ear development and hearing remain unknown. To study this role, we will use zebrafish as a model. Zebrafish offer significant advantages including established …

Carbon Nanomaterials In Freshwater Ecosystems: An Chronic, Multi-Generational, And Genomic Assessment Of Toxicity To Daphnia Magna, Devrah Anne Arndt

Theses and Dissertations

Carbon nanomaterials are synthesized with a variety of core structures and surface chemistries to make them more biocompatible for application in different industries, but variation in core structure and functionalization can change the toxicity of carbon nanomaterials to organisms. In addition, current literature is dominated by data from acute toxicity assays, but meta-data is necessary to improve our understanding of nanomaterial toxicity. This project identifies specific core structures and surface chemistries that make carbon nanomaterials more and less toxic using chronic toxicity assays and multi-generational assays to generate a dataset on the sub-lethal impacts of nanomaterials to Daphnia magna. In …

Mathematical Modeling Of Competition For Light And Nutrients Between Phytoplankton Species In A Poorly Mixed Water Column, Thomas George Stojsavljevic

Theses and Dissertations

Phytoplankton live in a complex environment with two essential resources forming various gradients. Light supplied from above is never homogeneously distributed in a body of water due to refraction and absorption from biomass present in the ecosystem and from other sources. Nutrients in turn are typically supplied from below. In poorly mixed water columns phytoplankton can be heterogeneously distributed forming various layering patterns. The relationship between the location and the thickness of the layers is an open problem of interest. Here we present three models which study how competition for light and resources can form common layering patterns seen in …

A Mathematical Model Of Moisture Movement And Bacterial Growth In Two-Dimensional Porous Medium, Rachel Elizabeth Tewinkel

Theses and Dissertations

Bacterial growth in sand is of concern in regard to the health of beaches. A mathematical model is presented that represents the movement of moisture and the growth of bacteria through a beach. Simulations were run by numerically solving Richards Equation using a Finite Volume Method in order to track moisture movement. A model of moisture-dependent bacterial growth was then implemented. These simulations show that elevated bacteria counts following rain events do not necessarily result from bacteria in the body of water, but can also be sourced from the sand. Additionally, four different moisture-dependent bacterial growth models are compared to …

The Effect Of Female Quality On Mating Preferences In The Eastern Gray Treefrog, Robb C. Kolodziej

Theses and Dissertations

Understanding the mechanisms driving female mate choice is critical to developing a holistic framework from which to assess effects and outcomes of sexual selection. I investigated the effects of female quality (measured as size, body condition and fecundity) on preferences for call traits that indicate either male quality (call duration) or species specificity (call pulse rate). I document large variation in both quality and call trait preferences of individual female Gray treefrogs, and show that preferences are influenced by female quality. Contrary to previous studies, however, I found that intermediate quality females show the strongest preferences, while low and high …

The Effects Of Supplemental Online Learning Aids On Student Performance And Student Engagement In Medical Microbiology, Kimberly Murray

Theses and Dissertations

The purpose of this study was to determine the effects of online learning aids on student performance and engagement. The thirty-five participants of the current study were students enrolled in two sections of a junior level Medical Microbiology laboratory. The experimental section was required to spend ten minutes each week on an online learning aid. The online program, StudyMateTM, was used to present text and images in the form of flash cards, multiple choice questions, matching, and crossword puzzles. Both groups completed the Index of Learning Style survey, an initial engagement survey at the start of the course, and a …