Life Sciences Commons^™

Statistical And Biological Analyses Of Acoustic Signals In Estrildid Finches, Moises Rivera

Dissertations, Theses, and Capstone Projects

Acoustic communication is a process that involves auditory perception and signal processing. Discrimination and recognition further require cognitive processes and supporting mechanisms in order to successfully identify and appropriately respond to signal senders. Although acoustic communication is common across birds, classical research has largely disregarded the perceptual abilities of perinatal altricial taxa. Chapter 1 reviews the literature of perinatal acoustic stimulation in birds, highlighting the disproportionate focus on precocial birds (e.g., chickens, ducks, quails). The long-held belief that altricial birds were incapable of acoustic perception in ovo was only recently overturned, as researchers began to find behavioral and physiological evidence …

Examining Transcriptional Regulators During Muscle Development In Drosophila Melanogaster, Chaamy Yapa

Student Theses and Dissertations

In Drosophila melanogaster embryos, a distinct approach to study the transcriptional regulation is to examine the larval somatic muscle development. Transcription factors are essential regulatory proteins that help to control gene expression and respond to signaling pathways and various cues. Today, there are at least twenty transcription factors that have been discovered to contribute to the development of the 30 distinct larval somatic muscles in each abdominal hemisegment of Drosophila melanogaster. Several studies have already been conducted on muscle regulatory transcription factors including midline and apterous. These transcription factors were shown to control the development of muscles through mutant …

American Eel (Anguilla Rostrata) And Other Fishes As Surveyed By Environmental Dna In The Bronx River And Hudson River Watershed, Sam C. Chin

Dissertations, Theses, and Capstone Projects

Mounting an effective response to the threats faced by freshwater fish may require expansions to aquatic biomonitoring in excess of what is feasible using the capture-based survey techniques currently relied upon by natural resource managers. Methods for analyzing environmental DNA (eDNA) are emerging as a minimally invasive and cost-effective approach for surveying fish and other organisms. By detecting taxon-specific DNA sequences recovered from environmental samples (e.g. water, sediment), eDNA methods are able to infer species presence from samples that can be collected rapidly with simple equipment. In many cases, eDNA detection rates of fish species have been shown to meet …

Investigation Of The Effect Of Senescence On Daily Activity Patterns In Male Octopus Insularis, Mariam Steinblatt

Theses and Dissertations

Senescent male octopuses often show comparatively increased activity. We observed daily activity for an adult male Octopus insularis. The subject's diurnal behavior was marked movement or stationary to observe differences. Movement increased over 26 days, but the difference was non-significant. The observation period was likely short, and the subject already senescent.

Methods For Drone Trajectory Analysis Of Bottlenose Dolphins (Tursiops Truncatus), Jillian D. Bliss

Theses and Dissertations

With the increase in the use of UAS (Unmanned Aerial Systems) for marine mammal research, there is a need for the development of methods of analysis to transform UAS high resolution video into quantitative data. This study sought to develop a preliminary method of analysis that would quantify and present a way to visualize the dynamics and relative spatial distribution and changes in distribution of bottlenose dolphins (Tursiops truncatus) in the waters of Turneffe Atoll, Belize. This approach employs a previously developed video tracking program ‘Keypoint Tracking’ that enables manual tracking of individual dolphins and the creation of …

Eavesdropping On Animals: Can Bioacoustics Help Save Species?, Zoe Grueskin

Capstones

Around the world, scientists are using sound to study the natural world in a growing field called bioacoustics. Researchers are eavesdropping on frogs and fish, elephants and earthworms, and many hope what they hear can inform and inspire conservation action around the world. From the field’s auspicious beginning with accidentally-recorded whales, to researchers today listening to locations as diverse as the Arctic seafloor and India’s Western Ghats mountain range, this capstone project explores the potential — and limitations — of conservation bioacoustics. Read the story, see photos and listen to audio pieces featuring three bioacousticians and their field recordings here: …

The Role Of Nest Location On The Reproductive Success Of Piping Plovers Breeding At Rockaway Beach, New York, Clara I.D. Arndtsen

Theses and Dissertations

The study’s goal was to learn what aspects of the piping plover experience affect reproductive outcomes at Rockaway Beach Endangered Species Nesting Area. Nest location was found to help predict reproductive success. Nests further from American oystercatcher nests were likely to fledge more chicks. Reproductive success was low in 2021.

Nm-Rs Au Naturale: Investigations Into Simulating A Natural Environment, Jenna Pantophlet

Theses and Dissertations

Naked Mole-rats (NM-Rs) have been studied in laboratories for decades due to their unique behavior and physiology. However, due to the scope and complexity of the NM-R’s natural subterranean tunneling system, it has been difficult to replicate in the laboratory environment. From a researcher’s perspective, optimal housing is cost- and space-efficient and easily cleaned. On the other hand, optimal animal welfare and husbandry encourages the most biologically relevant enclosure to evoke the fullest range of an animal's behavioral repertoire. While there is an abundance of works centered on the biomedical potential of these odd rodents (Buffenstein et al, 2012; Delaney …

Behavioral Patterns Of Goldfish (Carassius Auratus) Exploring A “Fish Tower”, Sasha Prasad-Shreckengast

Theses and Dissertations

Fish are held in captivity at some of the highest numbers of any taxa, but their curiosity is rarely studied. With this study, we set the groundwork to investigate the presence and nature of curiosity in goldfish (Carassius auratus) via novel free-choice exploration opportunities by creating a “fish tower."

Pushing It To The Limit: Determining Asian Elephant (Elephas Maximus) Olfactory Sensitivity And Discrimination Through A Behavioral Choice Task, Matthew S. Rudolph

Theses and Dissertations

Elephants have shown remarkable olfactory capabilities. Their sense of smell impacts their foraging choices, behavior, and ultimately, survival. Being able to detect a target odor can allow elephants to locate specific resources, identify threats, and find receptive conspecifics. Previous studies have shown that elephants can consistently detect target odors, but have not identified the limits of this detection. Thus, to investigate the extent of elephants’ odor detection capabilities, we tested Asian elephants in a two-step odor discrimination task. First, we investigated whether elephants could detect odors at varying levels of dilution after a training procedure, and then whether they could …

Dolphins In Ny? Researchers Turn To Boat Tours For Sightings, Aaron K. Tremper

Capstones

Before 2009, coastal bottlenose dolphins were a rare sight north of New Jersey. According to local researchers, large pods of bottlenose dolphins made their way that spring/summer along Long Island. While dolphin population data by state and federal wildlife regulators are spotty, studies by local scientists suggest more dolphins have been flocking to New York since 2009. Many researchers are turning to whale-watching ventures to learn more about what dolphins are up to in the Big Apple.

https://jkt711.github.io/capstone/

Vertebrate Scavenger Diversity And Ecosystem Services Along An Elevational Gradient In Central Nepal, Aishwarya Bhattacharjee

Dissertations, Theses, and Capstone Projects

A growing number of studies recognize the ecological significance of vertebrate scavengers, and several species belonging to this diverse, functional guild are of high conservation importance around the globe. Studies on taxonomic and functional components of biodiversity often use elevation gradients to comprehensively examine patterns and drivers across multiple spatial scales. Yet, there are relatively few elevational studies on large vertebrates or multi-taxa guilds, and the related variation of their ecosystem services. In particular, scavenger research has largely focused on local-scale studies or regional/global comparisons of local-scale investigations. Moreover, these studies primarily consider taxonomic community characteristics and the patterns of …

Some (Im)Material Girls, Living In (Im)Material Worlds, With Seeds, Stars, And Shit, Matthew Weiderspon

Theses and Dissertations

This writing situates material and gestural vocabularies cultivated in my artwork in relation to my lived experience; primarily my rural upbringing in Colorado. Scattered floor dispersals, calling sounds, and bodily movements desire reconsiderations of hope in precarity through a disorientation of place, association, scale, and language.

Investigating Social Preferences In A High Fission-Fusion Society Of Black And White Ruffed Lemur (Varecia Variegata), Patricia A. Adamo

Theses and Dissertations

Wild lemur primates were tested for social preferences across behaviors. Study found highly conservative social preferences that were very consistent across all behavioral states, despite high fission fusion traits common of lemur groups. This finding lays the foundation for using nearest-neighbor as a proxy of social preference for future endeavors.

Influence Of Group Change On Scent Marking In A Wild Population Of Verreaux’S Sifaka (Propithecus Verreauxi), Julia C. Dickerson

Theses and Dissertations

This study analyzed scent marking rates of wild Verreaux’s sifaka during dispersals to investigate the impact of group changes on olfactory communication. Our results indicate that scent marking is affected by changes in group structure, but other methods of communication likely play a larger role in mediating group membership changes.

Variation In Personality Among Semi-Wild Myanmar Timber Elephants, Sateesh Venkatesh

Theses and Dissertations

This study examines two personality traits: exploration and neophobia, which could influence human-elephant conflicts. Thirty-one semi-wild elephants were tested over two trials using a custom novel puzzle tube containing three tasks and three rewards. Our studies show that elephants do vary significantly between individuals in both exploration and neophobia.

Dietary Development And Nutritional Ontogeny In Gorilla Beringei : A Multi-Layered, -Omics Approach, Emma C. Cancelliere

Dissertations, Theses, and Capstone Projects

In species who consume folivorous diets, immature individuals must contend with the challenges of extracting nutrients from fibrous foods before dietary adaptations and strategies are fully developed. Additionally, immatures have distinct nutritional needs to support their stage-specific metabolic and biophysiological requirements. To meet these stage-specific needs, while constrained by underdeveloped feeding strategies and digestive capacities, immatures may adopt distinct diets better suited to their specific developmental context. However, where dietary modification is constrained by low dietary diversity or landscape homogeneity, it is unclear how immature individuals compensate through alternative strategies. In turn, little is known about the nutritional and life …

Tracing The Human-Avian Relationship In Iceland, Melanie Sua

Theses and Dissertations

An in-depth investigation explores the history of birds in Iceland and the interaction between birds and humans from the 9th through the 19th century, with the help of archaeological evidence, traditional and historical materials.

Using Object-Choice Tasks To Investigate Sensory Perception In Sunda Pangolins (Manis Javanica), Joshua Dipaola

Theses and Dissertations

Pangolins are one of the most heavily poached, yet least understood mammals in the world. In this study, we used an object-choice task to assess the ecological relevance and use of sensory information in Sunda pangolin foraging behavior. This is the first controlled experiment on pangolin behavior to our knowledge.

The Whelming Sea, Sean Hanley

Theses and Dissertations

The Whelming Sea is a thirty-minute experimental documentary that reveals the moments of entanglement between three animals living along the Mid-Atlantic shoreline; curious humans, spawning horseshoe crabs, and migratory shorebirds. Working from the realm of multispecies ethnography, the film shifts the subjective positioning of the viewer between the human and nonhuman to suggest the complexity of our enmeshed experience. In the face of this current era of mass extinction, the film explores the limitations and poetic possibilities of scientific encounters with the lives of others.

Feeding The Future Meat Doesn’T Come Cheap, Lukas C. Southard

Capstones

Cultured – or as it is referred to by companies innovating the technology clean – meat is expected to be the next innovation to change the way the world gets its animal protein. Meat from animal cells grown in a lab seems like science fiction but it is around the corner from hitting your supermarket shelves. The technology has been developed but how these companies intend on scaling up their production to meet retail demands remains a mystery. So far companies have relied on seed and early stage investment from venture capital companies and private sources to fund research. Predictions …

Contagious Yawning In The Domestic Cat (Felis Catus), Ariel M. Lombardo Aghishian

Theses and Dissertations

This study investigates contagious yawning in domestic cats towards their owners, looking at potential links with empathy. Results showed no significant difference in yawning between conditions. The solitary nature of wildcats and their shared ancestor, and the unique social behavior in domesticated cats may explain these findings.

Observation Of Visitors At A Chimpanzee (Pan Troglodytes Schweinfurthii) Ecotourism Site Reveals Opportunity For Multiple Modes Of Pathogen Transmission, Darcey Glasser

Theses and Dissertations

Chimpanzee (Pan troglodytes) tracking is a popular ecotourism activity across Sub-Saharan Africa, offering visitors a personal wildlife experience. However, chimpanzee ecotourism may increase the risk of disease transmission between chimpanzees and people. This study assessed how tourist behaviors might facilitate cross-species disease transmission in Kibale National Park, Uganda.

Stabilizing Forces In Acoustic Cultural Evolution: Comparing Humans And Birds, Daniel C. Mann

Dissertations, Theses, and Capstone Projects

Learned acoustic communication systems, like birdsong and spoken human language, can be described from two seemingly contradictory perspectives. On one hand, learned acoustic communication systems can be remarkably consistent. Substantive and descriptive generalizations can be made which hold for a majority of populations within a species. On the other hand, learned acoustic communication systems are often highly variable. The degree of variation is often so great that few, if any, substantive generalizations hold for all populations in a species.

Within my dissertation, I explore the interplay of variation and uniformity in three vocal learning species: budgerigars (Melopsittacus undulatus), …

Cognitive Models Of Defense Behaviors In Hosts Of Brood Parasites, Thomas J. Manna

Dissertations, Theses, and Capstone Projects

Social parasites exploit the behavioral repertoire of their hosts for their own benefit, thereby reducing host reproductive success. Whether and how hosts respond to prevent, reduce, or eliminate the costs of parasitism requires the characterization of host cognitive algorithms in response to parasites. In this dissertation, I review the suite of the defense behaviors and decision rules of hosts targeted by avian and insect brood parasites, and present new experimental data on the detection of parasitism through the visual system of focal host species. In Chapter 1, I review extensive data already accumulated to isolate the cognitive mechanisms used by …

The Influence Of Pointing Accuracy In An Object-Choice Task With Domestic Horses (Equus Caballus), Elizabeth A. Krisch

Theses and Dissertations

This study evaluated the influence of pointing accuracy and experimenter identity on domestic horse (Equus caballus) behavior in an object-choice task. Results suggest that after receiving inaccurate pointing cues, horses adapt their responses based on their familiarity with an experimenter, and exhibit signs of memory retention across test trials.

Dolphins In Space: Quantifying The Relative Positions Of Bottlenose Dolphins (Tursiops Truncatus), Megan S. Mcgrath

Theses and Dissertations

Bottlenose dolphins (Tursiops truncatus) are socially sophisticated mammals with high fission-fusion dynamics and complex communication. The relative positioning of individual dolphins as they swim within their social group may aid in the expression of social roles. This study sought to quantify relative positioning in a small social group of female bottlenose dolphins at the National Aquarium in Baltimore that included two mother-daughter pairs, maternal and paternal half-sisters, a half-aunt and niece, and one unrelated female. We devised a method for scoring relative positioning in three dimensions. We found that the two mothers and their juvenile and adult daughters …

The Effects Of Tactile And Visual Deterrents On Honey Badger Predation Of Beehives, Abigail S. Johnson

Theses and Dissertations

As human and elephant populations grow in Kenya so does human-elephant conflict. One of the most substantial contributors to this conflict, the crop-raiding behavior of elephants (Loxodonta africana), is alleviated through the use of Elephants and Bee Project's beehive fences. A threat to these beehives are the honey badgers (Mellivora capensis) who try to obtain honey, causing damage to the hive and the hive to abscond. The objective of this study was to improve the effectiveness of these beehive fences through identifying and testing novel honey badger deterrent methods. On-farm experiments in Taita Taveta County, Kenya …

The Morphology And Evolution Of The Primate Brachial Plexus, Brian M. Shearer

Dissertations, Theses, and Capstone Projects

Primate evolutionary history is inexorably linked to the evolution of a broad array of locomotor adaptations that have facilitated the clade’s invasion of new niches. Researchers studying the evolution of primates and of their individual locomotor adaptations have traditionally relied on bony morphology – a practical choice given the virtual non-existence of any other type of tissue in the fossil record. However, this focus downplays the potential importance of the many other structures involved in locomotion, such as muscle, cartilage, and neural tissue, which may each be influenced by separate selective forces because of their different roles in facilitating movement. …

The New World Of Pet Prosthetics, Anna Brooks

Capstones

When an abandoned dog was found in Brooklyn with his paw gnawed off, the animal shelter had two options: amputate the leg, or put the dog down. But neither seemed like a solution. So they decided to do something different, and fit the dog for a prosthetic leg. Prosthetics for people have been around for millennia, and now these devices are moving into the animal kingdom. This story explores the new world of animal prosthetics, and how these devices have changed the lives of animals like Mr. Stubbs — the first alligator with a prosthetic tail — and saved the …