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Full-Text Articles in Engineering

Pepblock Builder Vr – An Open-Source Tool For Gaming-Based Bio-Edutainment In Interactive Protein Design, Venkata V. B. Yallapragada, Tianshu Xu, Sidney P. Walker, Sabin Tabirca, Mark Tangney May 2021

Pepblock Builder Vr – An Open-Source Tool For Gaming-Based Bio-Edutainment In Interactive Protein Design, Venkata V. B. Yallapragada, Tianshu Xu, Sidney P. Walker, Sabin Tabirca, Mark Tangney

Cappa Publications

Proteins mediate and perform various fundamental functions of life. This versatility of protein function is an attribute of its 3D structure. In recent years, our understanding of protein 3D structure has been complemented with advances in computational and mathematical tools for protein modelling and protein design. 3D molecular visualisation is an essential part in every protein design and protein modelling workflow. Over the years, stand-alone and web-based molecular visualisation tools have been used to emulate three-dimensional view on computers. The advent of virtual reality provided the scope for immersive control of molecular visualisation. While these technologies have significantly improved our …


Low-Loss, Compact, Spot-Size-Converter Based Vertical Couplers For Photonic Integrated Circuits, Praveen K.J. Singaravelu, G.C.R. Devarapu, Sebastian A. Schulz, Quentin Wilmart, Stéphane Malhouitre, Ségolène Olivier, Liam O’Faolain Mar 2019

Low-Loss, Compact, Spot-Size-Converter Based Vertical Couplers For Photonic Integrated Circuits, Praveen K.J. Singaravelu, G.C.R. Devarapu, Sebastian A. Schulz, Quentin Wilmart, Stéphane Malhouitre, Ségolène Olivier, Liam O’Faolain

Cappa Publications

In recent years, the monolithic integration of new materials such as SiN, Ge and LiNbO3 on silicon (Si) has become important to the Si photonics community due to the possibility of combining the advantages of both material systems. However, efficient coupling between the two different layers is challenging. In this work, we present a spot size converter based on a two-tier taper structure to couple the optical mode adiabatically between Si and SiN. The fabricated devices show a coupling loss as low as 0.058 dB  ±  0.01 dB per transition at 1525 nm. The low coupling loss between the Si …


Mid-Infrared Optical Sensing Using Sub-Wavelength Gratings, Brian Hogan, Liam Lewis, Michael Mcauliffe, Stephen P. Hegarty Feb 2019

Mid-Infrared Optical Sensing Using Sub-Wavelength Gratings, Brian Hogan, Liam Lewis, Michael Mcauliffe, Stephen P. Hegarty

Cappa Publications

Optical sensing has shown great potential for both quantitative and qualitative analysis of compounds. In particular sensors which are capable of detecting changes in refractive index at a surface as well as in bulk material have received much attention. Much of the recent research has focused on developing technologies that enable such sensors to be deployed in an integrated photonic device. In this work we demonstrate experimentally, using a sub-wavelength grating the detection of ethanol in aqueous solution by interrogating its large absorption band at 9.54 µm. Theoretical investigation of the operating principle of our grating sensor shows that in …


Effects Of Fabrication Errors On The Focusing Performance Of A Sector Metalens, S. S. Stafeev, A. G. Nalimov, Liam O’Faolain, M. V. Kotlyar Nov 2018

Effects Of Fabrication Errors On The Focusing Performance Of A Sector Metalens, S. S. Stafeev, A. G. Nalimov, Liam O’Faolain, M. V. Kotlyar

Cappa Publications

Using e-beam lithography, a 16-sector spiral metalens was fabricated in an amorphous silicon, capable of converting linearly polarized incident light into an azimuthally polarized optical vortex. When illuminated by a 633-nm linearly polarized laser beam, the metalens generated a near-surface subwavelength focal spot equal to 0.75 of the incident wavelength at full-width of half-maximum intensity. The focusing performance of the spiral metalens was numerically shown to be sensitive to the deviation of the factual microrelief from the calculated height. For the designed microrelief height, a circularly polarized incident beam was focused into a bright ring with a reverse energy flow …


Rotation Of Two-Petal Laser Beams In The Near Field Of A Spiral Microaxicon, S. S. Stafeev, Liam O'Faolain, M. V. Kotlyar Jun 2018

Rotation Of Two-Petal Laser Beams In The Near Field Of A Spiral Microaxicon, S. S. Stafeev, Liam O'Faolain, M. V. Kotlyar

Cappa Publications

Using a spiral microaxicon with the topological charge 2 and NA = 0.6 operating at a 532-nm wavelength and fabricated by electron-beam lithography, we experimentally demonstrate the rotation of a two-petal laser beam in the near field (several micrometers away from the axicon surface). The estimated rotation rate is 55 °/mm and linearly dependent on the on-axis distance, with the theoretical rotation rate being 53 °/mm. The experimentally measured rotation rate is found to be linear and coincident with the simulation results only on the on-axis segment from 1.5 to 3 mm. The experimentally measured rotation rate is 66 °/mm …