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Full-Text Articles in Engineering

Editorial: Special Issue “Protein Modeling And Simulation: Selected Articles From The Computational Structural Bioinformatics Workshop 2021”, Negin Forouzesh, Kamal Ai Nasr Feb 2023

Editorial: Special Issue “Protein Modeling And Simulation: Selected Articles From The Computational Structural Bioinformatics Workshop 2021”, Negin Forouzesh, Kamal Ai Nasr

Computer Science Faculty Research

No abstract provided.


Designing Harvesting And Hauling Cost Models For Energy Cane Production For Biorefineries, Prabodh Illukpitiya, Firuz Yuldashev, Kabirat Nasiru Jul 2022

Designing Harvesting And Hauling Cost Models For Energy Cane Production For Biorefineries, Prabodh Illukpitiya, Firuz Yuldashev, Kabirat Nasiru

Agricultural and Environmental Sciences Faculty Research

The harvesting and hauling operations of bioenergy feedstock is an important area in biofuel production. Production costs can be minimized by maintaining optimal machinery units for these operations. The objective of this study is to design an optimal harvesting unit for bioenergy refinery and estimate harvesting and hauling costs of energy cane. A biorefinery with the annual capacity of processing twenty-five million imp. gallons of ethanol were considered. Given the efficiency of harvesting, a two-row soldier system was considered. Considering the year-round supply of energy cane to the refinery, the optimal machinery unit was designed, and the combined operation costs …


Electrospray Deposition Of Polyvinylidene Fluoride (Pvdf) Microparticles: Impact Of Solvents And Flow Rate, Akinwunmi Joaquim, Omari Paul, Michael Ibezim, Dewayne Johnson, April Falconer, Ying Wu, Frances Williams, Richard Mu Jul 2022

Electrospray Deposition Of Polyvinylidene Fluoride (Pvdf) Microparticles: Impact Of Solvents And Flow Rate, Akinwunmi Joaquim, Omari Paul, Michael Ibezim, Dewayne Johnson, April Falconer, Ying Wu, Frances Williams, Richard Mu

TIGER Institute Faculty Research

Polymeric microparticles have been shown to have great impacts in the area of drug delivery, biosensing, and tissue engineering. Electrospray technology, which provides a simple yet effective technique in the creation of microparticles, was utilized in this work. In addition, altering the electrospray experimental parameters such as applied voltage, flow rate, collector distance, solvents, and the polymer-solvent mixtures can result in differences in the size and morphology of the produced microparticles. The effects of the flow rate at (0.15, 0.3, 0.45, 0.6, 0.8, and 1 mL/h) and N, N-Dimethylformamide (DMF)/acetone solvent ratios (20:80, 40:60, 60:40, 80:20, 100:0 v/v) in the …


Automatic Identification And Monitoring Of Plant Diseases Using Unmanned Aerial Vehicles: A Review, Krishna Neupane, Fulya Baysal-Gurel Sep 2021

Automatic Identification And Monitoring Of Plant Diseases Using Unmanned Aerial Vehicles: A Review, Krishna Neupane, Fulya Baysal-Gurel

Agricultural and Environmental Sciences Faculty Research

Disease diagnosis is one of the major tasks for increasing food production in agriculture. Although precision agriculture (PA) takes less time and provides a more precise application of agricultural activities, the detection of disease using an Unmanned Aerial System (UAS) is a challenging task. Several Unmanned Aerial Vehicles (UAVs) and sensors have been used for this purpose. The UAVs’ platforms and their peripherals have their own limitations in accurately diagnosing plant diseases. Several types of image processing software are available for vignetting and orthorectification. The training and validation of datasets are important characteristics of data analysis. Currently, different algorithms and …


Can Agricultural Management Induced Changes In Soil Organic Carbon Be Detected Using Mid-Infrared Spectroscopy?, Jonathan Sanderman, Kathleen Savage, Shree R.S. Dangal, Gabriel Duran, Charlotte Rivard, Michel A. Cavigelli, Hero T. Gollany, Virginia L. Jin, Mark A. Liebig, Emmanuel Chiwo Omondi, Yichao Rui, Catherine Stewart Jun 2021

Can Agricultural Management Induced Changes In Soil Organic Carbon Be Detected Using Mid-Infrared Spectroscopy?, Jonathan Sanderman, Kathleen Savage, Shree R.S. Dangal, Gabriel Duran, Charlotte Rivard, Michel A. Cavigelli, Hero T. Gollany, Virginia L. Jin, Mark A. Liebig, Emmanuel Chiwo Omondi, Yichao Rui, Catherine Stewart

Agricultural and Environmental Sciences Faculty Research

A major limitation to building credible soil carbon sequestration programs is the cost of measuring soil carbon change. Diffuse reflectance spectroscopy (DRS) is considered a viable low-cost alternative to traditional laboratory analysis of soil organic carbon (SOC). While numerous studies have shown that DRS can produce accurate and precise estimates of SOC across landscapes, whether DRS can detect subtle management induced changes in SOC at a given site has not been resolved. Here, we leverage archived soil samples from seven long-term research trials in the U.S. to test this question using mid infrared (MIR) spectroscopy coupled with the USDA-NRCS Kellogg …


Unmanned Aircraft System (Uas) Technology And Applications In Agriculture, Samuel C. Hassler, Fulya Baysal-Gurel Oct 2019

Unmanned Aircraft System (Uas) Technology And Applications In Agriculture, Samuel C. Hassler, Fulya Baysal-Gurel

Agricultural and Environmental Sciences Faculty Research

Numerous sensors have been developed over time for precision agriculture; though, only recently have these sensors been incorporated into the new realm of unmanned aircraft systems (UAS). This UAS technology has allowed for a more integrated and optimized approach to various farming tasks such as field mapping, plant stress detection, biomass estimation, weed management, inventory counting, and chemical spraying, among others. These systems can be highly specialized depending on the particular goals of the researcher or farmer, yet many aspects of UAS are similar. All systems require an underlying platform—or unmanned aerial vehicle (UAV)—and one or more peripherals and sensing …


Rapid Profiling Of Soybean Aromatic Compounds Using Electronic Nose, Ramasamy Ravi, Ali Taheri, Durga Khandekar, Reneth Millas May 2019

Rapid Profiling Of Soybean Aromatic Compounds Using Electronic Nose, Ramasamy Ravi, Ali Taheri, Durga Khandekar, Reneth Millas

Agricultural and Environmental Sciences Faculty Research

Soybean (Glycine max (L.)) is the world’s most important seed legume, which contributes to 25% of global edible oil, and about two-thirds of the world’s protein concentrate for livestock feeding. One of the factors that limit soybean’s utilization as a major source of protein for humans is its characteristic soy flavor. This off-flavor can be attributed to the presence of various chemicals such as phenols, aldehydes, ketones, furans, alcohols, and amines. In addition, these flavor compounds interact with protein and cause the formation of new off-flavors. Hence, studying the chemical profile of soybean seeds is an important step in understanding …


Research Day Abstracts 2018-2019 Jan 2019

Research Day Abstracts 2018-2019

Student Research

No abstract provided.


Analytical Approaches To Improve Accuracy In Solving The Protein Topology Problem, Kamal Al Nasr, Feras Yousef, Ruba Jebril, Christopher Jones Jan 2018

Analytical Approaches To Improve Accuracy In Solving The Protein Topology Problem, Kamal Al Nasr, Feras Yousef, Ruba Jebril, Christopher Jones

Computer Science Faculty Research

To take advantage of recent advances in genomics and proteomics it is critical that the three-dimensional physical structure of biological macromolecules be determined. Cryo-Electron Microscopy (cryo-EM) is a promising and improving method for obtaining this data, however resolution is often not sufficient to directly determine the atomic scale structure. Despite this, information for secondary structure locations is detectable. De novo modeling is a computational approach to modeling these macromolecular structures based on cryo-EM derived data. During de novo modeling a mapping between detected secondary structures and the underlying amino acid sequence must be identified. DP-TOSS (Dynamic Programming for determining the …