Engineering Commons^™

Incorporating Feedback From Multiple Sensory Modalities Enhances Brain–Machine Interface Control, Aaron J. Suminski, Dennis C. Tkach, Andrew H. Fagg, Nicholas G. Hatsopoulos

Biomedical Engineering Faculty Research and Publications

The brain typically uses a rich supply of feedback from multiple sensory modalities to control movement in healthy individuals. In many individuals, these afferent pathways, as well as their efferent counterparts, are compromised by disease or injury resulting in significant impairments and reduced quality of life. Brain–machine interfaces (BMIs) offer the promise of recovered functionality to these individuals by allowing them to control a device using their thoughts. Most current BMI implementations use visual feedback for closed-loop control; however, it has been suggested that the inclusion of additional feedback modalities may lead to improvements in control. We demonstrate for the …

Correction To Mitochondrial Free [Ca2+] Increases During Atp/Adp Antiport And Adp Phosphorylation: Exploration Of Mechanisms, Johan Haumann, Ranjan K. Dash, David F. Stowe, Age D. Boelens, Daniel A. Beard, Amadou K.S. Camara

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Aortic Coarctation: Recent Developments In Experimental And Computational Methods To Assess Treatments For This Simple Condition, John F. Ladisa, Charles A. Taylor, Jeffrey A. Feinstein

Biomedical Engineering Faculty Research and Publications

Coarctation of the aorta (CoA) is often considered a relatively simple disease, but long-term outcomes suggest otherwise as life expectancies are decades less than in the average population and substantial morbidity often exists. What follows is an expanded version of collective work conducted by the authors' and numerous collaborators that was presented at the 1st International Conference on Computational Simulation in Congenital Heart Disease pertaining to recent advances for CoA. The work begins by focusing on what is known about blood flow, pressure and indices of wall shear stress (WSS) in patients with normal vascular anatomy from both clinical imaging …

Distribution Of Capillary Transit Times In Isolated Lungs Of Oxygen-Tolerant Rats, Madhavi Ramakrishna, Zhuohui Gan, Anne V. Clough, Robert C. Molthen, David L. Roerig, Said H. Audi

Biomedical Engineering Faculty Research and Publications

Rats pre-exposed to 85% O₂ for 5–7 days tolerate the otherwise lethal effects of 100% O₂. The objective was to evaluate the effect of rat exposure to 85% O₂ for 7 days on lung capillary mean transit time (t¯c) and distribution of capillary transit times (h _c(t)). This information is important for subsequent evaluation of the effect of this hyperoxia model on the redox metabolic functions of the pulmonary capillary endothelium. The venous concentration vs. time outflow curves of fluorescein isothiocyanate labeled dextran (FITC-dex), an intravascular indicator, and coenzyme Q₁ hydroquinone …

Ankle Strength And Functional Limitations In Children And Adolescents With Type I Osteogenesis Imperfecta, Angela Caudill, Ann Flanagan, Sahar Hassani, Adam Graf, Ruta Bajorunaite, Gerald F. Harris, Peter A. Smith

Biomedical Engineering Faculty Research and Publications

Purpose: To determine whether children with type I osteogenesis imperfecta (OI) exhibit ankle plantar flexor weakness and whether this correlates with physical function.

Methods: Twenty children and adolescents with type I OI and 20 age-matched controls (age 6-18 years) participated in a single evaluation session. Data included strength assessment, Gillette Functional Assessment Questionnaire, Pediatric Outcome Data Collection Instrument (PODCI), and Faces Pain Scale—Revised.

Results: Ankle plantar flexor weakness was evident in the OI group compared with the control group. Heel-rise strength correlated with ankle isometric plantar flexion strength. Limitations in PODCI subscales—sports and physical function and pain/comfort—are present in the …

Development Of A Unique Whole-Brain Model For Upper Extremity Neuroprosthetic Control, Dominic Nathan

Dissertations (1934 -)

Neuroprostheses are at the forefront of upper extremity function restoration. However, contemporary controllers of these neuroprostheses do not adequately address the natural brain strategies related to planning, execution and mediation of upper extremity movements. These lead to restrictions in providing complete and lasting restoration of function. This dissertation develops a novel whole-brain model of neuronal activation with the goal of providing a robust platform for an improved upper extremity neuroprosthetic controller. Experiments (N=36 total) used goal-oriented upper extremity movements with real-world objects in an MRI scanner while measuring brain activation during functional magnetic resonance imaging (fMRI). The resulting data was …

Detrimental Thoracoabdominal Interaction With Lateral Airbag Restraints, Jason John Hallman

Dissertations (1934 -)

Side impact motor vehicle crashes pose unique challenges for occupant protection, particularly with regard to torso injury mitigation. The minimal crush distance between the vehicle exterior and the occupant torso has necessitated advanced passive safety technologies in response to tightened regulatory requirements and increased public awareness of safety issues. In particular, lateral airbag restraints (side airbags) have undergone a rapid and unregulated introduction in recent years, with US availability increasing to over 90% of new vehicles in 2010. As with frontal airbag restraints, the prdissertationsity for injury to occupants in close proximity to side airbag deployment remains a concern. Test …

Validation Of A Micro-Ct Approach For Characterization Of Murine And Human Bone In Osteogenesis Imperfecta, John Jameson, Brooke Slavens, Robert Molthen, Peter Smith, Gerald Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Local Hemodynamic Changes Caused By Main Branch Stent Implantation And Subsequent Side Branch Balloon Angioplasty In A Representative Coronary Bifurcation, Andrew R. Williams, Bon-Kwon Koo, Timothy J. Gundert, Peter J. Fitzgerald, John F. Ladisa Jr.

Biomedical Engineering Faculty Research and Publications

Abnormal blood flow patterns promoting inflammation, cellular proliferation, and thrombosis may be established by local changes in vessel geometry after stent implantation in bifurcation lesions. Our objective was to quantify altered hemodynamics due to main vessel (MV) stenting and subsequent virtual side branch (SB) angioplasty in a coronary bifurcation by using computational fluid dynamics (CFD) analysis. CFD models were generated from representative vascular dimensions and intravascular ultrasound images. Time-averaged wall shear stress (TAWSS), oscillatory shear index (OSI), and fractional flow reserve (FFR) were quantified. None of the luminal surface was exposed to low TAWSS (/cm2) in the nondiseased bifurcation model. …

Mitochondrial Free [Ca2+] Increases During Atp/Adp Antiport And Adp Phosphorylation: Exploration Of Mechanisms, Johan Haumann, Ranjan K. Dash, David F. Stowe, Age D. Boelens, Daniel A. Beard, Amadou K.S. Camara

Biomedical Engineering Faculty Research and Publications

ADP influx and ADP phosphorylation may alter mitochondrial free [Ca²⁺] ([Ca²⁺]_m) and consequently mitochondrial bioenergetics by several postulated mechanisms. We tested how [Ca²⁺]_m is affected by H₂PO₄⁻ (P_i), Mg²⁺, calcium uniporter activity, matrix volume changes, and the bioenergetic state. We measured [Ca²⁺]_m, membrane potential, redox state, matrix volume, pH_m, and O₂ consumption in guinea pig heart mitochondria with or without ruthenium red, carboxyatractyloside, or oligomycin, and at several levels of Mg²⁺ and P_i. …

Design And Validation Of An Mr Conditional Upper Extremity Evaluation System To Study Brain Activation Patterns After Stroke, Rubing Xu

Master's Theses (2009 -)

Stroke is the third leading cause of death and second most frequent cause of disability in the United States. Stroke rehabilitation methods have been developed to induce the cortical reorganization and motor-relearning that leads to stroke recovery. In this thesis, we designed and developed an MR conditional upper extremity reach and grasp movement evaluation system for the stroke survivors to study their kinematic performances in reach and grasp movement and the relationship between kinematic metrics and the recovery level measured by clinical assessment methods. We also applied the system into the functional MRI experiments to identify the ability to study …

Quantification Of 99mTc-Duramycin Uptake Kinetics In The Area-At-Risk After Myocardial Ischemia And Reperfusion, Joseph Capacete

Master's Theses (2009 -)

Myocardial infarction (MI) is a condition in which blood supply to the heart is insufficient. MI is associated with two forms of cell death: apoptosis and necrosis. ^99mTc-duramycin (^99mTc-D) is a novel radiopharmaceutical that detects cell death by recognizing externalized phosphatidylethanolamine. The objective of this study was to develop a compartmental model for ^99mTc-D uptake kinetics in normal and infarct myocardium, and utilize this model to compare the uptake kinetics of ^99mTc-D in MI with that of another radiopharmaceutical, ^99mTc-C2A-GST.

MI was induced in rats which were then injected (i.v.) with ^99mTc-D. Rats …

Image-Based Quantification Workflow For Coronary Morphology: A Tool For Use In Next-Generation Bifurcation Stent Design, Sara Marie Nomeland

Master's Theses (2009 -)

Coronary artery disease (CAD) occurs in ~200,000 bifurcation lesions annually. Treatment of CAD near bends and bifurcations is challenging and a preferred strategy for bifurcation lesions has yet to be established. However, a favorable treatment option may be elucidated by a more thorough understanding of vessel morphology as well as local hemodynamic alterations caused by current stenting approaches. Computational modeling of human arteries offers an attractive way to investigate the relationships between geometry, hemodynamics and vascular disease. Recent developments also make it possible to perform analysis on realistic geometries acquired noninvasively.

The objective of this work was twofold. The first …

Visual, Motor And Attentional Influences On Proprioceptive Contributions To Perception Of Hand Path Rectilinearity During Reaching, Robert A. Scheidt, Kyle P. Lillis, Scott J. Emerson

Biomedical Engineering Faculty Research and Publications

We examined how proprioceptive contributions to perception of hand path straightness are influenced by visual, motor and attentional sources of performance variability during horizontal planar reaching. Subjects held the handle of a robot that constrained goal-directed movements of the hand to the paths of controlled curvature. Subjects attempted to detect the presence of hand path curvature during both active (subject driven) and passive (robot driven) movements that either required active muscle force production or not. Subjects were less able to discriminate curved from straight paths when actively reaching for a target versus when the robot moved their hand through the …

Epidermal Neural Crest Stem Cell (Epi-Ncsc)--Mediated Recovery Of Sensory Function In A Mouse Model Of Spinal Cord Injury, Yao Fei Hu, Krishnaj Gourab, Clive Wells, Oliver Clives, Brian D. Schmit, Maya Sieber-Blum

Biomedical Engineering Faculty Research and Publications

Here we show that epidermal neural crest stem cell (EPI-NCSC) transplants in the contused spinal cord caused a 24% improvement in sensory connectivity and a substantial recovery of touch perception. Furthermore we present a novel method for the ex vivo expansion of EPI-NCSC into millions of stem cells that takes advantage of the migratory ability of neural crest stem cells and is based on a new culture medium and the use of microcarriers. Functional improvement was shown by two independent methods, spinal somatosensory evoked potentials (SpSEP) and the Semmes-Weinstein touch test. Subsets of transplanted cells differentiated into myelinating oligodendrocytes. Unilateral …

Upper Extremity Kinetics During Lofstrand Crutch-Assisted Gait In Children, Neha Bhagchandani

Master's Theses (2009 -)

Complete biomechanical analysis helps evaluate the motion during various gait patterns for the upper and lower extremities. Extensive studies have been performed to evaluate unassisted gait patterns, but very little has been accomplished for studying assisted motion. Children with pathologies such as osteogenesis imperfecta, spinal cord injury, and cerebral palsy use assistive devices such as anterior and posterior walkers, canes, Lofstrand and axillary crutches for ambulation purposes.

Statistics show that there are currently about 566,000 crutch users in the United States. The long-term crutch users in this population can suffer various upper limb pathologies associated with extensive upper extremity (UE) …

A Non-Rigid Registration Method For Analyzing Myocardial Wall Motion For Cardiac Ct Images, Elizabeth B. Philps

Master's Theses (2009 -)

Cardiac resynchronization therapy (CRT) has a high percentage of non-responders. Successfully locating the optimal location for CRT lead placement on a priori images can increase efficiency in procedural preparation and execution and could potentially increase the rate of CRT responders.

Registration has been used in the past to assess the motion of medical images. Specifically, one method of non-rigid registration has been utilized to assess the motion of left ventricular MR cardiac images. As CT imaging is often performed as part of resynchronization treatment planning and is a fast and accessible means of imaging, extending this registration method to assessing …

Bi-Planar Postural Stability Model: Fitting Parameters To Patient Data Automatically, Andrew Michael Sovol

Master's Theses (2009 -)

Studies of children with cerebral palsy (CP) have shown that maintaining control of posture in quiet standing is often difficult. Physical therapy and assistive devices, both with or without surgery, may be employed in an effort to improve postural stability. Assessing the effectiveness of such interventions is important for healthcare providers and their patients. A previously created bi-planar model of posture control has been further developed as a method of assessment. This MATLAB and Simulink model has successfully replicated experimental results for typical adults and children, as well as children with CP across three different test conditions: eyes open, eyes …

Sensitivity Of Motor Adaptation To The Statistical Properties Of An Environmental Load, Timothy Michael Haswell

Master's Theses (2009 -)

Linear, limited-memory models capture many important features of adaptive motor performance during reaching, stepping and pointing. A recent study in our lab found that a model fitted to data obtained from subjects reaching against elastic loads which varied from trial-to-trial later failed to fit the steady-state response behavior of subjects exposed to deterministic, step changes in load. Does motor adaptation depend on statistical properties of the environment (eg. mean load strength and variability)? Neurologically intact volunteers (n=14) made 6 blocks of 100 planar, ballistic, 10cm, out-and-back reaching movements against spring-like loads having equilibrium positions at the hand's starting point. View …

Mitochondrial Matrix K+ Flux Independent Of Large-Conductance Ca2+-Activated K+ Channel Opening, Mohammed Aldakkak, David F. Stowe, Qunli Cheng, Wai-Meng Kwok, Amadou K.S. Camara

Biomedical Engineering Faculty Research and Publications

Large-conductance Ca²⁺-activated K⁺ channels (BK_Ca) in the inner mitochondrial membrane may play a role in protecting against cardiac ischemia-reperfusion injury. NS1619 (30 μM), an activator of BK_Ca channels, was shown to increase respiration and to stimulate reactive oxygen species generation in isolated cardiac mitochondria energized with succinate. Here, we tested effects of NS1619 to alter matrix K⁺, H⁺, and swelling in mitochondria isolated from guinea pig hearts. We found that 30 μM NS1619 did not change matrix K⁺, H⁺, and swelling, but that 50 and 100 …

Ct Energy Weighting In The Presence Of Scatter And Limited Energy Resolution, Taly Gilat Schmidt

Biomedical Engineering Faculty Research and Publications

Purpose: Energy-resolved CT has the potential to improve the contrast-to-noise ratio(CNR) through optimal weighting of photonsdetected in energy bins. In general, optimal weighting gives higher weight to the lower energy photons that contain the most contrast information. However, low-energy photons are generally most corrupted by scatter and spectrum tailing, an effect caused by the limited energy resolution of the detector. This article first quantifies the effects of spectrum tailing on energy-resolved data, which may also be beneficial for material decomposition applications. Subsequently, the combined effects of energy weighting, spectrum tailing, and scatter are investigated through simulations.

Methods: The study first …

The Effect Of Ace Inhibition On The Pulmonary Vasculature In Combined Models Of Chronic Hypoxia And Pulmonary Arterial Banding In Sprague Dawley Rats, Shanelle Clarke, Shelley Baumgardt, Robert C. Molthen

Biomedical Engineering Faculty Research and Publications

Microfocal CT was used to image the pulmonary arterial (PA) tree in rodent models of pulmonary hypertension (PH). CT images were used to measure the arterial tree diameter along the main arterial trunk at several hydrostatic intravascular pressures and calculate distensibility. High-resolution planar angiographic imaging was also used to examine distal PA microstructure. Data on pulmonary artery tree morphology improves our understanding of vascular remodeling and response to treatments. Angiotensin II (ATII) has been identified as a mediator of vasoconstriction and proliferative mitotic function. ATII has been shown to promote vascular smooth muscle cell hypertrophy and hyperplasia as well as …

Time-Efficient Patient-Specific Quantification Of Regional Carotid Artery Fluid Dynamics And Spatial Correlation With Plaque Burden, John F. Ladisa, Mark Bowers, Leanne Harmann, Robert W. Prost, Anil Vamsi Doppalapudi, Tayyab Mohyuddin, Osama Zaidat, Raymond Q. Migrino

Biomedical Engineering Faculty Research and Publications

Purpose:

Low wall shear stress (WSS) and high oscillatory shear index (OSI) influence plaque formation, yet little is known about their role in progression/regression of established plaques because of lack of practical means to calculate them in individual patients. Our aim was to use computational fluid dynamics(CFD) models of patients with carotid plaque undergoing statin treatment to calculate WSS and OSI in a time-efficient manner, and determine their relationship to plaque thickness (PT), plaque composition (PC), and regression.

Methods:

Eight patients (68±9 yr, one female) underwent multicontrast 3 T MRI at baseline and six-month post statin treatment. PT and PC …

Integration Mechanisms For Heading Perception, Elif M. Sikoglu, Finnegan J. Calabro, Scott A. Beardsley, Lucia M. Vaina

Biomedical Engineering Faculty Research and Publications

Previous studies of heading perception suggest that human observers employ spatiotemporal pooling to accommodate noise in optic flow stimuli. Here, we investigated how spatial and temporal integration mechanisms are used for judgments of heading through a psychophysical experiment involving three different types of noise. Furthermore, we developed two ideal observer models to study the components of the spatial information used by observers when performing the heading task. In the psychophysical experiment, we applied three types of direction noise to optic flow stimuli to differentiate the involvement of spatial and temporal integration mechanisms. The results indicate that temporal integration mechanisms play …

The Effect Of Abductor Muscle And Anterior-Posterior Hip Contact Load Simulation On The In-Vitro Primary Stability Of A Cementless Hip Stem, Youngbae Park, Carolyne Albert, Yong-San Yoon, Göran Fernlund, Hanspeter Frei, Thomas R. Oxland

Biomedical Engineering Faculty Research and Publications

Background

In-vitro mechanical tests are commonly performed to assess pre-clinically the effect of implant design on the stability of hip endoprostheses. There is no standard protocol for these tests, and the forces applied vary between studies. This study examines the effect of the abductor force with and without application of the anterior-posterior hip contact force in the in-vitro assessment of cementless hip implant stability.

Methods

Cementless stems (VerSys Fiber Metal) were implanted in twelve composite femurs which were divided into two groups: group 1 (N = 6) was loaded with the hip contact force only, whereas group 2 (N = …

Motion Of The Multisegmental Foot In Hallux Valgus, Karl Canseco, Leah Rankine, Jason T. Long, Thomas Smedberg, Richard Marks, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

Hallux valgus is a common condition characterized by lateral deviation of the large toe and medial deviation of the first metatarsal. While some gait analyses of patients with hallux valgus have been performed using plantar pressures, very little is known about the kinematics of gait in this population. The purpose of this study was to evaluate triplanar kinematics in patients with hallux valgus using a multisegmental foot model. Materials and Methods: A 15-camera Vicon Motion Analysis System was used to evaluate the gait of 38 feet in 33 patients with mild to severe hallux valgus. The Milwaukee foot model was …