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Full-Text Articles in Engineering

Evaluating Algorithms Used For Fetal Brain Scan Segmentation, Connor Stewart Burgess Aug 2021

Evaluating Algorithms Used For Fetal Brain Scan Segmentation, Connor Stewart Burgess

Undergraduate Student Research Internships Conference

The goal for this project was to successfully segment a fetal brain scan (fetal scan) using the algorithms provided by the program Slicer3D. To better understand the hurdles that arose when segmenting a fetal scan, we first look at the segmentation of an adult brain scan. This will allow us to see the straightforward nature of a brain segmentation when a high quality, high resolution volume with distinct structures is available. After examining the adult brain scan, attention will be moved to the segmentation of the fetal scan, where we’ll first look at the algorithms used and methods followed. Finally …


Multi-Atlas Segmentation Of The Facial Nerve, Bradley M. Gare Jun 2019

Multi-Atlas Segmentation Of The Facial Nerve, Bradley M. Gare

Electronic Thesis and Dissertation Repository

Medical image segmentation is an important step to identify the shape and position of patient anatomy prior to surgical simulation, surgical rehearsal, and surgical planning. It is crucial that the facial nerve (FN) is segmented accurately as damage to this nerve can severely impact facial expression, speech, and taste. Manual segmentation provides accurate results but is time-consuming and labor-intensive; semi-automatic methods of segmentation are more feasible in a clinical setting and can provide accurate results with minimal user involvement. The objective of this work was to create a novel, open-source, multi-atlas based segmentation algorithm of the entire FN requiring minimal …


Modeling Lung Tissue Motions And Deformations: Applications In Tumor Ablative Procedures, Ali Sadeghi Naini May 2011

Modeling Lung Tissue Motions And Deformations: Applications In Tumor Ablative Procedures, Ali Sadeghi Naini

Electronic Thesis and Dissertation Repository

Various types of motion and deformation that the lung undergoes during minimally invasive tumor ablative procedures have been investigated and modeled in this dissertation. The lung frequently undergoes continuous large respiratory deformation, which can greatly affect the pre-planned outcome of the operation, hence deformation compensation becomes necessary. The first type of major deformation involved in a target lung throughout a tumor ablative procedure is the one encountered in procedures where the lung is totally deflated before starting the operation. A consequence of this deflation is that pre-operative images (acquired while the lung was partially inflated) become inaccurate for targeting the …