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Cocoa Polyphenols Modulate The Fecal Microbiome In A Mouse Model Of Colitis, Independent Of Basal Diet And Colon Inflammation, Abby D. Benninghoff

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Chronic inflammation increases the risk of developing multiple chronic diseases, including cancer. The risk of developing colorectal cancer (CRC) specifically is increased in individuals who suffer from colitis, a characteristic of Inflammatory Bowel Disease (IBD). Diet is another risk factor for developing CRC, particularly an inflammation-promoting Western-type diet. Thus, supplementing a Western diet with functional foods containing anti-inflammatory polyphenols is a potential approach to decreasing CRC risk by reducing gut inflammation and altering gut microbiome profile. This study aimed to determine the effects of cocoa polyphenol (CP) supplementation on inflammation status and microbiome profile before, during, and after colitis when …

Environmental Factors Associated With Triploid Aspen Occurrence In Intermountain West Landscapes, Karen E. Mock, James A. Walton

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Polyploidy is common among plants and can contribute to physiological and morphological differences, altering how plants respond to environmental changes, promoting genetic diversification, and even species radiation. Quaking aspen (Populus tremuloides), a keystone species associated with high plant and animal diversity is frequently found in mixed diploid/triploid populations in the Intermountain West. High mortality rates and widespread population declines in aspen are of increasing concern in the Intermountain West, often ascribed to changing climates and drought stress events. The goal of this study was to better understand environmental factors influencing the distribution of triploid aspen population in the Intermountain West. …

Slr Practitioner Needs, Daniella Hirschfeld, Kelli Archie, Emilio Mateo, James C. Arnott, Julie A. Vano

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As sea levels continue to rise, practitioners at the local and regional scale are under increased pressure to reduce risks to people and property posed by the threats of sea-level rise (SLR) and associated impacts. To achieve this, a transdisciplinary approach that integrates data-driven research with local knowledge and community engagement is necessary. As such, it is imperative the science community understands the needs of practitioners. However, there has been little qualitative assessment of adaptation practice in coastal areas, especially with a focus on the needs of practitioners in making use of current SLR science. Our mixed-methods approach began with …

Investigating Channel Narrowing And Nonnative Vegetation Encroachment In Three Dryland Rivers, Casey Pennock, Benjamin Miller, Phaedra Budy

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Water development and the proliferation of invasive riparian vegetation has led to widespread habitat loss and simplification of rivers in the western United States, contributing to the imperilment of native fishes. Here, we quantify channel narrowing and vegetation encroachment, which are conspicuous indicators of riverine habitat degradation, along approximately 400 km of three dryland tributaries of the upper Colorado River. To accomplish this, we conducted a comparative analysis of aerial photographs from historical (1930s) and contemporary (2010s or 2020s) time periods and utilized Light Detection and Ranging (LiDAR) data and Object-Based Image Analysis (OBIA) to determine contemporary canopy cover of …

Using Nonnative Vegetation To Enhance In-Stream Habitat For Native Fishes, Casey Pennock, Benjamin Miller, Phaedra Budy

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Flow alteration and riparian vegetation encroachment are causing habitat simplification with severe consequences for native fishes. To assess the effectiveness of enhancing simplified habitat in a large dryland river, we experimentally added invasive wood at 19 paired treatment and reference (no wood added) subreaches (50 - 100m) within the main channel of the San Juan River. Using a before-after-control-impact design, we sampled fishes and macroinvertebrates, and quantified habitat complexity. After wood addition, total native fish densities were 2.2x higher in treatments compared to references, whereas total nonnative fish densities exhibited no response. Macroinvertebrate densities were 6.8x higher, and habitat complexity …

Data For: Channel Response To Flow Augmentation: Diamond Fork River, Ut Dataset, Diane Wagner, Peter Wilcock

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A river's physical features and channel dimensions are determined by the water and sediment supplied to it. The Diamond Fork River, located in central Utah–received large trans-basin diversion flows from 1915-2003, providing an exceptional opportunity to explore the response of a river to a large increase in flow.

Our project goals were to describe 1) channel response to this large and long artificial flow augmentation and 2) how the channel recovered after the removal of the diversion flows. The objective of this thesis is to document the channel condition throughout the 20th century to present day as a basis for …

Hazara University's Monocot Specimen Data In Openherbarium.Org On 20 December 2023, Mary Barkworth, Liaqat Ullah, Abdul Majid, Ghulam Mujtaba Shah, Jan Alam

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Northern Pakistan is interpreted here as including three administrative regions: Khyber Pakhtunkhwa, Gilgit-Baltistan, and Azad Jammu and Kashmir. It is dominated by multiple mountain ranges whose valleys drain, directly or indirectly, into the Indus River. Hazara University, which is in Khyber Pakhtunkhwa, was started in 2002 and its herbarium (HUP) in 2005. Digitization of the herbarium's vascular plants began in 2021 with its records being shared in OpenHerbarium and GBIF. Its online presence is now growing more rapidly than any other Pakistani herbarium. This paper summarizes the taxonomic diversity and geographic origin of its monocot holdings in 2023. In 2023, …

Data From: Unveiling The Physical Properties Predictive Of Oil Binding Capacity In An Interesterified Palm-Based Fat, Melissa Marsh, Brennan Bean, Farnaz Maleky, Silvana Martini

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This paper identifies physical properties of an interesterified palm-based fat (EIEPO) that predict oil binding capacity (OBC). A 100% EIEPO sample, 50% EIEPO sample diluted with 50% soybean oil (SBO), and a 20% EIEPO sample diluted with 80% SBO were used to test how saturation level impacts OBC. All samples were crystallized using either a fast (6.4°C/min) or slow (0.1°C/min) cooling rate as well as with or without the application of high-intensity ultrasound (HIU; 20kHz) to generate a wide range of physical properties. Immediately after crystallization, the sample's physical properties, including crystal microstructure, solid fat content (SFC), viscoelasticity (G', G", …

Greater Sage-Grouse Brood Locations On Parker Mountain Utah 1998-2009, David Dahlgren

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Species of conservation concern are often habitat specialists, posing significant risk to those species when specific plant communities are threatened. Despite this, practitioners habitually focus conservation efforts on these singular communities, while ignoring ecological mechanisms that explain the wildlife-plant relationships. In doing so, practitioners may overlook alternative vegetation communities that could maintain wildlife populations under alternative conditions (e.g., climate change). Here, we term these areas surrogate habitat, defined as "vegetation communities or resource sites that provide similar critical resources to conventional sites," and assess their potential for conservation using a case-study of Greater sage-grouse (Centrocercus urophasianus) on Parker Mountain, Utah …

Data From: Climate Change-Driven Cumulative Mountain Pine Beetle-Caused Whitebark Pine Mortality In The Greater Yellowstone Ecosystem, William W. Macfarlane

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In 2018-2019 the Landscape Assessment System (LAS), an aerial survey method was used to assess mountain pine beetle (Dendroctonus ponderosae; MPB) - caused mortality of whitebark pine (Pinus albicaulis) across the Greater Yellowstone Ecosystem (59000 km2; GYE). This consisted of 11,942 km of flightlines, along which 4,434 geo-tagged, oblique aerial photos were captured and processed. A mortality rating of none to severe (0 to 4 nt attack or 5.0 5.4 old attack) was assigned to each photo based on the amount of red (recent attack) and gray (old attack) trees visible. The method produced a photo inventory of 74 percent …

Molecular Dynamics Simulations Of The Spontaneous Deformation And Auxetics Behavior During Tensile Test Of A Nematic Liquid Crystal Elastomer Model, Haoran Wang, Nanang Mahardika

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Nematic liquid crystal elastomers (LCEs) are advanced materials known for their shape-changing capability in response to external stimuli such as heat, light and electromagnetic fields. This makes them excellent candidates for applications like soft robotics and energy harvesting. While studies on their physical behavior have shed light on the complex nonlinear mechanics of LCEs, investigations through all-atom molecular dynamics (MD) simulations remain an underutilized avenue compared to experimental and theoretical analyses. This limited use is primarily due to the lack of well-established frameworks for conducting high-fidelity atomistic simulations of LCEs. To bridge this gap, we introduce an all-atom MD simulation …

Data From: Root Distributions Predict Shrub-Steppe Responses To Precipitation Intensity, Andrew Kulmatiski, Karen H. Beard

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Precipitation events are becoming more intense around the world, changing the way water moves through soils and plants. Plant rooting strategies that sustain water uptake under these conditions are likely to become more abundant (e.g., shrub encroachment). Yet, it remains difficult to predict species responses to climate change because we typically do not know where active roots are located or how much water they absorb. Here, we applied a water tracer experiment to describe forb, grass, and shrub root distributions. These measurements were made in 8 m by 8 m field shelters with low or high precipitation intensity. We used …

Student Goal Setting, Goal Tracking, And Goal Accomplishment, Jared Hansen, Paul Wilson, Jeff Christensen

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This dataset came from the research paper "Sustainably engaging student personal development in a distracting digital world through experiential goal setting and weekly goal tracking" coauthored by the researchers. The project examines the effects of student weekly goal tracking reports on student goal achievement. It also examines the effect of SMART goal elements and if the goal is sustainability focused. It controls for student biological sex and for student work team drama. Using student goal achievement (0/1) as the dependent variable, the authors apply binary logistic regression analysis to the data.

Heterochronic Serum Proteins, Jeffrey Mason

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Mechanism of ovarian-dependent enhancement of health and longevity in postreproductive female mice

Technology Acceptance Model(Tam) And Ai Hallucination Survey Dataset, Jared Hansen, Jeff Christensen, Paul Wilson

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This dataset came from the research paper “Understanding the antecedents, advantages, and mistakes of technology adoption of Artificial Intelligence (AI) within consumers’ tourism decision-making processes” coauthored by the researchers. The project examines the integration of elements from the technology acceptance model, theory of planned behavior, and three new variables (AI prior general usage, AI familiarity, and AI hallucination potential) to prediction behavioural intention to use AI (ChatGPT) in making future tourism decisions.

Nalidarturbopauseshear, Titus Yuan

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The USU Na lidar has been upgraded to be able to measure temperature and winds in the lower thermosphere up to ~ 115 km routinely. The new capability, coupled with the existing nightglow instruments at USU, enables the investigation of the extreme large wind and shears in this region and their correlation to the atmospheric gravity waves activities in the upper mesosphere.

Utah State University Covid-19 Oral History Collection Supplemental Documentation, Utah State University Special Collections & Archives

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The last time Utah State University (USU) closed for a pandemic was over a hundred years ago, in fall 1918. Evidence, especially firsthand accounts, of that period in USU’s history are limited in the archives. In the wake of the COVID-19 pandemic, Special Collections and Archives has collected the experiences of Utah State faculty, staff, and students in oral histories. These oral histories document the individual accounts of initial shutdowns and the continued response efforts through 2022. From the president of the university to student workers each oral history offers insight into how Utah State responded as an institution. Supplementing …

Murine Hearing Abr/Dpoae Assessments In Cmv-Infected Mouse Pups Receiving Peritoneal Antivirals Of Gcv, Quercetin+P188, Or A Combination. Controls Include Infected And Untreated And Non-Infected And Treated. Second Dataset Of Antiviral Assay In A Murine Stria Vascularis (Sv) Monolayer Cell Culture, David Britt, Albert Park

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Ganciclovir (GCV) has been shown to be an effective antiviral for the treatment of congenital cytomegalovirus (cCMV) induced sensorineural hearing loss. However, dose-dependent adverse effects (e.g. neutropenia) require strict, burdensome monitoring, limiting GCV use in some patients. Quercetin is a flavonoid with antioxidant properties that has demonstrated antiviral therapy against CMV. Although more benign than GCV, quercetin has limited therapeutic value due to its poor solubility. We previously reported that GCV improves hearing thresholds in a murine model of cCMV. We also noted that solubilizing quercetin with poloxamer 188 (P188) and combining with GCV therapy amplified CMV inhibition in murine …

Mesopause Region Temperature And Na Number Density Between 1990 And 2017, Tao Yuan, Chiao-Yao She

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The Colorado State University (CSU) Na lidar performed nocturnal mesopause region Na density and temperature observations between March 1990 and March 2010 at Fort Collins, CO (41.6N, 105W). The lidar was relocated to Utah State University (USU) campus and has continued its regular observation at Logan, Utah (42N, 112W) since September 2010.

Effects Of Pregnancy And Progesterone On Atrial Fibrillation, Heloisa M. Rutigliano

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Atrial Fibrillation (AF) is the most common cardiac arrythmia in adults with likely sex-specific risk factors. Female sex hormones may be important in modulating risk for atrial fibrillation. We hypothesize that pregnancy and progesterone (P4), a hormone found in high levels during pregnancy with abrupt withdrawal immediately after parturition, modulates AF susceptibility in female goats. Cardiac specific TGF-?1 transgenic female goats and age-matched wild-type (WT) female goats were utilized. Pacemakers were implanted in all animals for continuous arrhythmia monitoring and AF inducibility. AF inducibility was evaluated using 5 separate 10 s bursts of atrial pacing (160 - 200 ms). In …

Digital Atlas Of The Vascular Plants Of Utah, R. Douglas Ramsey, Leila M. Shultz, Wanda Lindquist, Chris Garrard, Mindy Wheeler

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Locations of 74,755 vascular plant vouchers representing 2,425 species were digitized into a spatial database from the Atlas of the Vascular Plants of Utah (Albee et al. 1988). Source maps consisted of 1:6,000,000-scale shaded relief maps of Utah with points representing collection locations by species. Location points, representing 1 or more specimens, were transposed onto these maps from the approximately 400,000 herbarium records of 3 major universities and federal land management agencies.

Dynamic Fecal Microbiota Transfer From Mice With Western Diet-Induced Severe Colitis And Colon Tumorigenesis Did Not Exacerbate Colitis Symptoms Or Colon Tumorigenesis In Recipient Mice Fed Either The Ain93g Diet Or The Total Western Diet, Abby D. Benninghoff

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Consumption of the total Western diet (TWD) in mice has been shown to increase gut inflammation, promote colon tumorigenesis, and alter the fecal microbiome composition in mice as com-pared to mice fed a healthy diet, AIN93G (AIN). However, it is unclear whether the gut micro-biome contributes directly to colitis-associated CRC in this model. The objective of this study was to determine whether dynamic fecal microbiota transfer (FMT) from host mice fed either AIN or TWD basal diets would alter colitis symptoms or colitis-associated CRC in recipient mice, which were fed either AIN or TWD directly using a 2x2 factorial experiment …

Supplementary Files For "Adaptive Mapping Of Design Ground Snow Loads In The Conterminous United States", Jadon Wagstaff, Jesse Wheeler, Brennan Bean, Marc Maguire, Yan Sun

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Recent amendments to design ground snow load requirements in ASCE 7-22 have reduced the size of case study regions by 91% from what they were in ASCE 7-16, primarily in western states. This reduction is made possible through the development of highly accurate regional generalized additive regression models (RGAMs), stitched together with a novel smoothing scheme implemented in the R software package remap, to produce the continental- scale maps of reliability-targeted design ground snow loads available in ASCE 7-22. This approach allows for better characterizations of the changing relationship between temperature, elevation, and ground snow loads across the Conterminous United …

N-Back Accuracy And Neural Activation In Dld, Ronald Gillam

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The present study was designed to explore the general cognitive mechanisms in WM that are often found to be impaired in children with DLD. A continuous auditory N-back task was used to probe cognitive abilities such as sustained attention, storage, updating, and inhibition in monolingual TD children and children with DLD. FNIRS was used to examine the hemodynamic response patterns in the left DLPFC and IPL as children performed 0-back, 1-back, and 2-back tasks. The 0-back task was used in our analysis as a control for sustained attention. The research questions were: 1) Are there differences in N-back response accuracy …

Thermal Tolerance And Physiology Of Eleutherodactylus Coqui Along An Elevational Gradient In Hawai‘I, Karen H. Beard, Susannah S. French, Jack Marchetti

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The purpose of this study was to determine if the thermal tolerance and physiology of the coqui frog changed along HawaiÔiÕs elevation gradient. A short acclimation experiment was used to test the baseline thermal tolerance and physiology, and an extended acclimation experiment to test the acclimation ability of the thermal tolerance and physiology metrics of the coqui frogs collected from low (m), medium (350-550 m) and high elevations (>750 m).

Pariette Wetlands Water, Sediment And Plant Total Selenium Concentration, Colleen P. Jones, Paul R. Grossl, Astrid R. Jacobson

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We measured total Selenium in plants from July through November of 2012 and in water, macroinvertebrates, plants, and sediments from July of 2014 from Pariette Wetlands, Utah, U.S.A. to test for spatial, temporal, plant species and plant tissue distribution of Selenium.

Elevation Influences The Microhabitat Use And Baseline Physiology Of Coqui Frogs In Hawai‘I, Karen H. Beard, Susannah S. French, Jack Marchetti

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The purpose of this study was to determine whether elevation in HawaiÔi affects the coquiÕs microhabitat use such as substrate choice and height off the forest floor and physiological metrics such as osmolality, oxidative status, and energy metabolites (glucose, free glycerol, and triglycerides).

Data For Gridding, Joseph D. Birch, James A. Lutz, Soren Struckman, Jessica Miesel, Justine Karst

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Background: Large-diameter trees have an outsized influence on aboveground forest dynamics, composition, and structure. Although their influence on aboveground processes is well studied, their role in shaping belowground fungal communities is largely unknown. We sought to test if (H1) fungal community spatial structure matched aboveground forest structure, (H2) fungal functional guilds exhibited differential associations to aboveground tree, snag, and deadwood, and (H3) that large-diameter trees and snags have a larger influence on fungal community richness than smaller-diameter trees. We used MiSeq sequencing of fungal communities collected from soils in a spatially intensive survey in a portion of Cedar Breaks National …

Dietary Supplementation With Black Raspberries Altered The Gut Microbiome Composition In A Mouse Model Of Colitis-Associated Colorectal Cancer, Although With Differing Effects For A Healthy Versus A Western Basal Diet, Abby D. Benninghoff

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Black raspberries (BRB) are rich in anthocyanins with purported anti-inflammatory properties. However, it is not known whether dietary supplementation would ameliorate Western-diet enhanced gut inflammation and colon tumorigenesis. We employed a mouse model of colitis-associated colorectal cancer (CAC) to determine the effects of dietary supplementation with 5 to 10% (w/w) whole, freeze-dried BRB in male C57BL/6J mice fed either a standard healthy diet (AIN93G) or the total Western diet (TWD). In a pilot study, BRB suppressed colitis and colon tumorigenesis while also shifting the composition of the fecal microbiome in favor of taxa with purported health benefits, including Bifidobacteria pseudolongum. …

Study Into The Sensitity Of The G-H Method To Blending Distance, Cory Goates, Doug Hunsaker

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A numerical lifting-line method (implemented in an open-source software package) is presented which can accurately estimate the aerodynamics of wings with arbitrary sweep, dihedral, and twist. Previous numerical lifting-line methods have suffered from grid convergence challenges and limitations in accurately modeling the effects of sweep, or have relied on empirical relations for swept-wing parameters and have been limited in their application to typical wing geometries. This work presents novel improvements in accuracy, flexibility, and speed for complex geometries over previous methods. In the current work, thin-airfoil theory is used to correct section lift coefficients for sweep, providing a more general …