Digital Commons Network^™

Development Of Machine Learning Models To Predict The Online Impact Of Research, Mohammed Murtuza Shahzad Syed

Graduate Research Theses & Dissertations

Scientific research is being increasingly shared online in a way such that there is a need to develop methodologies to measure the impact of specific papers in ways that go beyond traditional indicators of scholarly citations and beyond the scholarly community. In this thesis, new machine learning models are developed to measure and predict the impact ofresearch in the online context. The extent to which research papers are mentioned on social media platforms, i.e., their online sustainability, indicates the public's interest in and perhaps even the level of understanding of scientific topics. A research paper having a long lifespan, i.e., …

Carbon Footprint Of Machine Learning Algorithms, Gigi Hsueh

Senior Projects Spring 2020

With the rapid development of machine learning, deep learning has demonstrated superior performance over other types of learning. Research made possible by big data and high-end GPU's enabled those research advances at the expense of computation and environmental costs. This will not only slow down the advancement of deep learning research because not all researchers have access to such expensive hardware, but it also accelerates climate change with increasing carbon emissions. It is essential for machine learning research to obtain high levels of accuracy and efficiency without contributing to global warming. This paper discusses some of current approaches in estimating …

Outlier Profiles Of Atomic Structures Derived From X-Ray Crystallography And From Cryo-Electron Microscopy, Lin Chen, Jing He, Angelo Facchiano

Computer Science Faculty Publications

Background: As more protein atomic structures are determined from cryo-electron microscopy (cryo-EM) density maps, validation of such structures is an important task. Methods: We applied a histogram-based outlier score (HBOS) to six sets of cryo-EM atomic structures and five sets of X-ray atomic structures, including one derived from X-ray data with better than 1.5 Å resolution. Cryo-EM data sets contain structures released by December 2016 and those released between 2017 and 2019, derived from resolution ranges 0–4 Å and 4–6 Å respectively. Results: The distribution of HBOS values in five sets of X-ray structures show that HBOS is sensitive distinguishing …

Modelling Interleaved Activities Using Language Models, Eoin Rogers, Robert J. Ross, John D. Kelleher

Conference papers

We propose a new approach to activity discovery, based on the neural language modelling of streaming sensor events. Our approach proceeds in multiple stages: we build binary links between activities using probability distributions generated by a neural language model trained on the dataset, and combine the binary links to produce complex activities. We then use the activities as sensor events, allowing us to build complex hierarchies of activities. We put an emphasis on dealing with interleaving, which represents a major challenge for many existing activity discovery systems. The system is tested on a realistic dataset, demonstrating it as a promising …

Synthesising Tabular Datasets Using Wasserstein Conditional Gans With Gradient Penalty (Wcgan-Gp), Manhar Singh Walia, Brendan Tierney, Susan Mckeever

Conference papers

Deep learning based methods based on Generative Adversarial Networks (GANs) have seen remarkable success in data synthesis of images and text. This study investigates the use of GANs for the generation of tabular mixed dataset. We apply Wasserstein Conditional Generative Adversarial Network (WCGAN-GP) to the task of generating tabular synthetic data that is indistinguishable from the real data, without incurring information leakage. The performance of WCGAN-GP is compared against both the ground truth datasets and SMOTE using three labelled real-world datasets from different domains. Our results for WCGAN-GP show that the synthetic data preserves distributions and relationships of the real …

Online Clustering With Bayesian Nonparametrics, Matthew D. Scherreik

Browse all Theses and Dissertations

Clustering algorithms, such as Gaussian mixture models and K-means, often require the number of clusters to be specified a priori. Bayesian nonparametric (BNP) methods avoid this problem by specifying a prior distribution over the cluster assignments that allows the number of clusters to be inferred from the data. This can be especially useful for online clustering tasks, where data arrives in a continuous stream and the number of clusters may dynamically change over time. Classical BNP priors often overestimate the number of clusters, however, leading researchers to develop new priors with more control over this tendency. To date, BNP algorithms …

Cnn-Based Estimation Of Sagittal Plane Walking And Running Biomechanics From Measured And Simulated Inertial Sensor Data, Eva Dorschky, Marlies Nitschke, Christine F. Martindale, Antonie J. Van Den Bogert, Anne D. Koelewijn, Bjoern M. Eskofier

Mechanical Engineering Faculty Publications

Machine learning is a promising approach to evaluate human movement based on wearable sensor data. A representative dataset for training data-driven models is crucial to ensure that the model generalizes well to unseen data. However, the acquisition of sufficient data is time-consuming and often infeasible. We present a method to create realistic inertial sensor data with corresponding biomechanical variables by 2D walking and running simulations. We augmented a measured inertial sensor dataset with simulated data for the training of convolutional neural networks to estimate sagittal plane joint angles, joint moments, and ground reaction forces (GRFs) of walking and running. When …

Introduction: Intelligent Entertainment: Shaping Policies On The Algorithmic Generation And Regulation Of Creative Works, Hannibal Travis

FIU Law Review

No abstract provided.

Hierarchical Clustering To Predict The Response Of Cardiac Resynchronization Therapy In Patients With Heart Failure, Rukayat Bukola Adeosun

Dissertations, Master's Theses and Master's Reports

The heterogeneous nature of today’s evolving health databases requires new techniques and approaches to process these data and extract clinically useful information. This relevant information obtained can be used to improve the response rate of cardiac resynchronization therapy (CRT) in patients with heart failure. Hierarchical clustering (HC) which is an unsupervised ML technique may uncover clusters within the bulk of data of patient population which is useful for strategies towards precision and personalized medicine. This study aims to investigate how HC can be used to automatically group a bulk of clinically acquired CRT data into clusters and subgroups that could …

Application Of Advanced Algorithms And Statistical Techniques For Weed-Plant Discrimination, Saman Akbar Zadeh

Theses: Doctorates and Masters

Precision agriculture requires automated systems for weed detection as weeds compete with the crop for water, nutrients, and light. The purpose of this study is to investigate the use of machine learning methods to classify weeds/crops in agriculture. Statistical methods, support vector machines, convolutional neural networks (CNNs) are introduced, investigated and optimized as classifiers to provide high accuracy at high vehicular speed for weed detection.

Initially, Support Vector Machine (SVM) algorithms are developed for weed-crop discrimination and their accuracies are compared with a conventional data-aggregation method based on the evaluation of discrete Normalised Difference Vegetation Indices (NDVIs) at two different …

Deep Neural Network Based M-Learning Model For Predicting Mobile Learners'performance, Muhammad Adnan, Asad Habib, Jawad Ashraf, Shafaq Mussadiq, Arsalan Ali

Turkish Journal of Electrical Engineering and Computer Sciences

The use of deep learning (DL) techniques for mobile learning is an emerging field aimed at developing methods for finding mobile learners' learning behavior and exploring important learning features. The learning features (learning time, learning location, repetition rate, content types, learning performance, learning time duration, and so on) act as fuel to DL algorithms based on which DL algorithms can classify mobile learners into different learning groups. In this study, a powerful and efficient m-learning model is proposed based on DL techniques to model the learning process of m-learners. The proposed m-learning model determines the impact of independent learning features …

Comparative Analysis Of Classification Techniques For Network Fault Management, Mohammed Madi, Fidaa Jarghon, Yousef Fazea, Omar Almomani, Adeeb Saaidah

Turkish Journal of Electrical Engineering and Computer Sciences

Network troubleshooting is a significant process. Many studies were conducted about it. The first step in the troubleshooting procedures is represented in collecting information. It's collected in order to identify the problems. Syslog messages which are sent by almost all network devices include a massive amount of data that concern the network problems. Based on several studies, it was found that analyzing syslog data (which) can be a guideline for network problems and their causes. The detection of network problems can become more efficient if the detected problems have been classified based on the network layers. Classifying syslog data requires …

Revised Polyhedral Conic Functions Algorithm For Supervised Classification, Gürhan Ceylan, Gürkan Öztürk

Turkish Journal of Electrical Engineering and Computer Sciences

In supervised classification, obtaining nonlinear separating functions from an algorithm is crucial for prediction accuracy. This paper analyzes the polyhedral conic functions (PCF) algorithm that generates nonlinear separating functions by only solving simple subproblems. Then, a revised version of the algorithm is developed that achieves better generalization and fast training while maintaining the simplicity and high prediction accuracy of the original PCF algorithm. This is accomplished by making the following modifications to the subproblem: extension of the objective function with a regularization term, relaxation of a hard constraint set and introduction of a new error term. Experimental results show that …

Predicting Drug Misuse Status Using Machine Learning On Electronic Health Records, Robert Arnold Kania

Master's Theses

Substance misuse is a major problem in the world. in 2014, as many as 52,404 deaths in the US were caused by drug overdoses. in 2001, the monetary cost of drug misuse has been estimated to be 414 billion dollars. in this work, we explore the use of different machine learning algorithms in the prediction of cocaine misuse using structured and unstructured data found in electronic health records. These records contain various attributes that can help with this prediction, including but not limited to chart text data, previous diagnoses of certain diseases and information about the area the patient lives …

Coproid Predicts The Source Of Coprolites And Paleofeces Using Microbiome Composition And Host Dna Content, Maxime Borry, Bryan Cordova, Angela Perri, Marsha Wibowo, Tanvi Prasad Honap, Jada Ko, Kate Britton, Linus Girdland-Flink, Robert C. Power, Ingelise Stuijts, Domingo C. Salazar-García, Courtney Hofman, Richard Hagan, Thérèse Samdapawindé Kagoné, Nicolas Meda, Helene Carabin, David Jacobson, Karl Reinhard, Cecil Lewis, Aleksandar Kostic, Choongwon Jeong, Alexander Herbig, Alexander Hübner, Christina Warinner

Karl Reinhard Publications

Shotgun metagenomics applied to archaeological feces (paleofeces) can bring new insights into the composition and functions of human and animal gut microbiota from the past. However, paleofeces often undergo physical distortions in archaeological sediments, making their source species difficult to identify on the basis of fecal morphology or microscopic features alone. Here we present a reproducible and scalable pipeline using both host and microbial DNA to infer the host source of fecal material. We apply this pipeline to newly sequenced archaeological specimens and show that we are able to distinguish morphologically similar human and canine paleofeces, as well as non-fecal …

Disaster Damage Categorization Applying Satellite Images And Machine Learning Algorithm, Farinaz Sabz Ali Pour, Adrian Gheorghe

Engineering Management & Systems Engineering Faculty Publications

Special information has a significant role in disaster management. Land cover mapping can detect short- and long-term changes and monitor the vulnerable habitats. It is an effective evaluation to be included in the disaster management system to protect the conservation areas. The critical visual and statistical information presented to the decision-makers can help in mitigation or adaption before crossing a threshold. This paper aims to contribute in the academic and the practice aspects by offering a potential solution to enhance the disaster data source effectiveness. The key research question that the authors try to answer in this paper is how …

Wheat Growth Monitoring And Yield Estimation Based On Multi-Rotor Unmanned Aerial Vehicle, Zhaopeng Fu, Jie Jang, Yang Gao, Brian Krienke, Meng Wang, Kaitai Zhong, Qiang Cao, Yongchao Tian, Yan Zhu, Weixing Cao, Xiaojun Liu

Department of Agronomy and Horticulture: Faculty Publications

Leaf area index (LAI) and leaf dry matter (LDM) are important indices of crop growth. Real-time, nondestructive monitoring of crop growth is instructive for the diagnosis of crop growth and prediction of grain yield. Unmanned aerial vehicle (UAV)-based remote sensing is widely used in precision agriculture due to its unique advantages in flexibility and resolution. This study was carried out on wheat trials treated with different nitrogen levels and seeding densities in three regions of Jiangsu Province in 2018–2019. Canopy spectral images were collected by the UAV equipped with a multi-spectral camera during key wheat growth stages. To verify the …

A Review On Multi-Lingual Sentiment Analysis By Machine Learning Methods, Santwana Sagnika, Anshuman Pattanaik, Bhabani Shankar Prasad Mishra, Saroj K. Meher

Journal Articles

The arrival of e-commerce and the multitude of information presented by the web have established the internet as a principal destination for consumers looking for truthful opinions and multiple viewpoints for some product, news, topic, or trend in the markets. Thus, it is desirable to make this search easier by using systems which sift through the mass of data and summarize the available opinions for easy understanding of the seeker. This task, known as sentiment analysis, is currently a prominent area of research. Sentiment analysis can be useful for businesses, data analysts and data scientists, as well as customers. Even …

Optimal Feature Selection For Learning-Based Algorithms For Sentiment Classification, Zhaoxia Wang, Zhiping Lin

Research Collection School Of Computing and Information Systems

Sentiment classification is an important branch of cognitive computation—thus the further studies of properties of sentiment analysis is important. Sentiment classification on text data has been an active topic for the last two decades and learning-based methods are very popular and widely used in various applications. For learning-based methods, a lot of enhanced technical strategies have been used to improve the performance of the methods. Feature selection is one of these strategies and it has been studied by many researchers. However, an existing unsolved difficult problem is the choice of a suitable number of features for obtaining the best sentiment …

Exploring The Potential Of Artificial Intelligence And Machine Learning To Combat Covid-19 And Existing Opportunities For Lmic: A Scoping Review, Maleeha Naseem, Ramsha Akhund, Hajra Arshad, Muhammad Talal Ibrahim

Community Health Sciences

Background: In the face of the current time-sensitive COVID-19 pandemic, the limited capacity of healthcare systems resulted in an emerging need to develop newer methods to control the spread of the pandemic. Artificial Intelligence (AI), and Machine Learning (ML) have a vast potential to exponentially optimize health care research. The use of AI-driven tools in LMIC can help in eradicating health inequalities and decrease the burden on health systems.
Methods: The literature search for this Scoping review was conducted through the PubMed database using keywords: COVID-19, Artificial Intelligence (AI), Machine Learning (ML), and Low Middle-Income Countries (LMIC). Forty-three articles were …

Artificial Intelligence In Plasma Electrolytic Micro-Oxidation For Surface Hardening - Insights From Scholarly Citation Networks And Patents., Priya Jadhav, Dr.Arun Bongale, Dr.Satish Kumar, Dr.Amit Kumar Tiwari

Library Philosophy and Practice (e-journal)

Objective - The purpose of this article is to analyze the top work areas and patent domains in the field of surface hardening by micro-arc oxidation. Also, it is directed on the opportunities of data analysis by different machine learning tools. Material and methods - The www.lens.org database is used to collect articles from Elsevier, Trans tech publications, Springer New York, MDPI, etc. to review the relevant articles as well as patents related to the topic. The result - A total of 1057 articles were published in 60 different journals and 756 patents in the area of research under various …

An Analysis Of The Success Of Farmers Markets In Kentucky Using Logistic Regression And Support Vector Machines, Jeron Russell

Mahurin Honors College Capstone Experience/Thesis Projects

The purpose of this research is to look at the relationship that market-specific, economic, and demographic variables have with the success of farmers markets in Kentucky. It additionally seeks to build a tool for predicting farmers market success that could be used by policy makers to aid in decision-making processes concerning farmers markets. Logistic regression and Support Vector Machines (SVMs) are used on data acquired from the Kentucky Department of Agriculture and the American Community Survey in order to analyze the data in a traditional statistical approach as well as a machine learning approach. The results included an SVM model …

Accounting For Training Data Error In Machine Learning Applied To Earth Observations, Arthur Elmes, Hamed Alemohammad, Ryan Avery, Kelly Caylor, J. Ronald Eastman, Lewis Fishgold, Mark A. Friedl, Meha Jain, Divyani Kohli, Juan Carlos Laso Bayas, Dalton Lunga, Jessica L. Mccarty, Robert Gilmore Pontius, Andrew B. Reinmann, John Rogan, Lei Song, Hristiana Stoynova, Su Ye, Zhuang Fang Yi, Lyndon Estes

Geography

Remote sensing, or Earth Observation (EO), is increasingly used to understand Earth system dynamics and create continuous and categorical maps of biophysical properties and land cover, especially based on recent advances in machine learning (ML). ML models typically require large, spatially explicit training datasets to make accurate predictions. Training data (TD) are typically generated by digitizing polygons on high spatial-resolution imagery, by collecting in situ data, or by using pre-existing datasets. TD are often assumed to accurately represent the truth, but in practice almost always have error, stemming from (1) sample design, and (2) sample collection errors. The latter is …

Special Section Guest Editorial: Machine Learning In Optics, Jonathan Howe, Travis Axtell, Khan Iftekharuddin

Electrical & Computer Engineering Faculty Publications

This guest editorial summarizes the Special Section on Machine Learning in Optics.

Vegetation Detection Using Deep Learning And Conventional Methods, Bulent Ayhan, Chiman Kwan, Bence Budavari, Liyun Kwan, Yan Lu, Daniel Perez, Jiang Li, Dimitrios Skarlatos, Marinos Vlachos

Electrical & Computer Engineering Faculty Publications

Land cover classification with the focus on chlorophyll-rich vegetation detection plays an important role in urban growth monitoring and planning, autonomous navigation, drone mapping, biodiversity conservation, etc. Conventional approaches usually apply the normalized difference vegetation index (NDVI) for vegetation detection. In this paper, we investigate the performance of deep learning and conventional methods for vegetation detection. Two deep learning methods, DeepLabV3+ and our customized convolutional neural network (CNN) were evaluated with respect to their detection performance when training and testing datasets originated from different geographical sites with different image resolutions. A novel object-based vegetation detection approach, which utilizes NDVI, computer …

Superconducting Radio-Frequency Cavity Fault Classification Using Machine Learning At Jefferson Laboratory, Chris Tennant, Adam Carpenter, Tom Powers, Anna Shabalina Solopova, Lasitha Vidyaratne, Khan Iftekharuddin

Electrical & Computer Engineering Faculty Publications

We report on the development of machine learning models for classifying C100 superconducting radio-frequency (SRF) cavity faults in the Continuous Electron Beam Accelerator Facility (CEBAF) at Jefferson Lab. CEBAF is a continuous-wave recirculating linac utilizing 418 SRF cavities to accelerate electrons up to 12 GeV through five passes. Of these, 96 cavities (12 cryomodules) are designed with a digital low-level rf system configured such that a cavity fault triggers waveform recordings of 17 rf signals for each of the eight cavities in the cryomodule. Subject matter experts are able to analyze the collected time-series data and identify which of the …

Heterogeneous Multi-Layered Network Model For Omics Data Integration And Analysis, Bohyun Lee, Shuo Zhang, Aleksandar Poleksic, Lei Xie

Faculty Publications

Advances in next-generation sequencing and high-throughput techniques have enabled the generation of vast amounts of diverse omics data. These big data provide an unprecedented opportunity in biology, but impose great challenges in data integration, data mining, and knowledge discovery due to the complexity, heterogeneity, dynamics, uncertainty, and high-dimensionality inherited in the omics data. Network has been widely used to represent relations between entities in biological system, such as protein-protein interaction, gene regulation, and brain connectivity (i.e. network construction) as well as to infer novel relations given a reconstructed network (aka link prediction). Particularly, heterogeneous multi-layered network (HMLN) has proven successful …