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University of Wollongong

Faculty of Informatics - Papers (Archive)

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2006

Design

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The Design And Analysis Of Multi-Phase Plant Breeding Experiments, A B. Smith, P Lim, Brian R. Cullis Jan 2006

The Design And Analysis Of Multi-Phase Plant Breeding Experiments, A B. Smith, P Lim, Brian R. Cullis

Faculty of Informatics - Papers (Archive)

Despite the importance of selection for quality characteristics in plant improvement programmes, literature on experimental design and statistical analysis for these traits is scarce. Most quality traits are obtained from multi-phase experiments in which plant varieties are first grown in a field trial then further processed in the laboratory. In the present paper a general mixed model approach for the analysis of multi-phase data is described, with particular emphasis on quality trait data that are often highly unbalanced and involve substantial sources of non-genetic variation and correlation. Also detailed is a new approach for experimental design that employs partial replication …


On The Design Of Early Generation Variety Trials With Correlated Data, Brian R. Cullis, A B. Smith, N. E. Coombes Jan 2006

On The Design Of Early Generation Variety Trials With Correlated Data, Brian R. Cullis, A B. Smith, N. E. Coombes

Faculty of Informatics - Papers (Archive)

This article considers the design of early generation variety trials with a prespecified spatial correlation structure and introduces a new class of partially replicated designs called p-rep designs in which the plots of standard varieties are replaced by additional plots of test lines. We show how efficient p-rep designs can be readily generated using the modified Reactive TABU search algorithm. The expected and realized genetic gain of p-rep and grid plot designs is compared in a simulation study.