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Nitrogen Mass Balance And Cattle Performance Of Steers Fed Clinoptilolite Zeolite Clay, Dawn M. Sherwood, Galen E. Erickson, Terry J. Klopfenstein

Nebraska Beef Cattle Reports

A winter and a summer nitrogen mass balance experiment were conducted to analyze effects of feeding clinoptilolite zeolite clay to steers. No differences were found in steer ADG, F/G or carcass characteristics. Nitrogen mass balance and volatilization were not affected by a 1.2% addition of clinoptilolite in feedlot diets. These experiments indicate clinoptilolite zeolite clay does not have a large enough cation exchange potential to be effective in reducing N volatilization in open feedlot pens.

Economics Of Manure Phosphorus Distribution From Beef Feeding Operations, William F. Kissinger, Galen E. Erickson, Richard K. Koelsch, Raymond E. Massey

Nebraska Beef Cattle Reports

An economic model was developed to evaluate cost and value of manure distribution. A 2,500 head feedlot was used as a case study to calculate excretion amounts from cattle fed diets with a range of phosphorus. Diet P and subsequent costs of distributing that manure were used to analyze the corresponding costs of manure P distribution, in addition to determining the required acres needed to be in compliance with a nutrient management plan (NMP) based on use of manure P by the crops grown. The model illustrated when animals are fed diets of increasing P concentration, total distribution cost increased, …

Nebraska 2006 Beef Cattle Report

Nebraska Beef Cattle Reports

Table of Contents

Cow/Calf
Effects of Supplementing Beef Cows with Lipid from Whole Corn Germ
Effects of Supplementing Lactating, June-calving Cows on Second-calf Pregnancy Rates
Effects of Pre- and Postpartum Nutrition on Reproduction in Spring Calving Cows and Calf Feedlot Performance
Effects of Dam Nutrition on Growth and Reproductive Performance of Heifer Calves
A System for Wintering Beef Heifers Using Dried Distillers Grains
Feeding Melengestrol Acetate to Bulls Prior to and at Puberty Alters Body Weight, and Hormone Concentration
Vascular Endothelial Growth Factor mRNA Isoforms 120 and 164 Are Differentially Regulated Prior to Ovulation
Bull Exposure, When Combined with a …

Properties Of Chitosan Films As A Function Of Ph And Solvent Type, Ki Myong Kim, Jeong Hwa Son, Sung-Koo Kim, Curtis L. Weller, Milford Hanna

Biological Systems Engineering: Papers and Publications

Two different deacetylated chitosans were dissolved in formic, acetic, lactic, or propionic acid to prepare chitosan films. The pH values of the film-forming solutions were adjusted to 3, 4, and 5. Water vapor permeability (WVP), tensile strength (TS), elongation (E), and total soluble matter (TSM) were significantly (P < 0.05) affected by acid type, pH, and degree of deacetylation (DA). Low DA (LDA) chitosan films had lower WVP and TSM, higher TS compared with high DA (HDA) chitosan films. The E values were not affected by DA. As pH increased, WVP and TSM of chitosan films tended to increase while TS decreased significantly (P < 0.05). Chitosan films with acetic and propionic acid solvents had low WVP and TSM and high TS, while films with lactic acid solvent had high E and TSM and the lowest TS. Fourier-transform infrared showed peak shifting in the spectra with different solvents and at different pH values. Chitosan films with lactic acid solvent showed a peak shift to a lower frequency range. The NH3+ band was absent in the pH 5.0 chitosan film spectra.

Modeling Of Transport Phenomena And Melting Kinetics Of Starch In A Co-Rotating Twin-Screw Extruder, Lijun Wang, David D. Jones, Curtis L. Weller, Milford Hanna

Biological Systems Engineering: Papers and Publications

A mathematical model was developed to simulate fluid flow, heat transfer, and melting kinetics of starch in a co-rotating intermeshing twin-screw extruder (TSE). The partial differential equations governing the transport phenomena of the biomaterial in the extruder were solved by a finite element scheme. For validating the model, the predicted product pressure, bulk temperature at the entrance of the die, and minimum residence time of the biomaterial in the extruder were compared with experimental data. Standard errors of product pressure, bulk temperature at the die entrance, and minimum residence time were about 8.8, 2.8, and 17.3%. Simulations were carried out …

Postharvest Treatment To Control Codling Moth In Fresh Apples Using Water Assisted Radio Frequency Heating, Shaojin Wang, Sohan Birla, J. D. Hansen

Biological Systems Engineering: Papers and Publications

Apples destined for export to Japan and South Korea are currently disinfested for codling moth, Cydia pomonella L. (Lepidoptera: Tortricidae), using methyl bromide fumigation. Restrictions and limitations imposed on the uses of methyl bromide have increased interest in developing alternative non-chemical quarantine treatments. It is imperative that the treatment is effective against codling moth yet maintains the quality of treated apples. The present study explored the application of radio frequency (RF) energy in conjunction with conventional hot water treatment to develop feasible heat treatments. Treatment parameters were selected based on minimum time–temperature conditions required for 100% mortality of fifth-instar codling …

Land Application Of Manure For Beneficial Reuse, L. M. Risse, M. L. Cabrera, A. J. Franzluebbers, J. W. Gaskin, John E. Gilley, R. Killorn, D. E. Radcliffe, W. E. Tollner, H. Zhang

Biological Systems Engineering: Papers and Publications

The concentration of animal production systems has increased efficiency and improved overall economic return for animal producers. This concentration, along with the advent of commercial fertilizers, has led to a change in the way animal producers view manure. Manure, once valued as a resource by farmers, is now treated as a waste. Air and water quality concerns that arise primarily from the under-utilization or inefficient use of manure contribute to these changing views. However, when properly used, manure is a resource and should be regulated as such. In the United States, the USDA/EPA Unified National Strategy for Animal Feeding Operations …

Seven New Species Of Eimeria Schneider, 1875 (Apicomplexa: Eimeriidae) From Colubrid Snakes Of Guatemala And A Discussion Of What To Call Ellipsoid Tetrasporocystic, Dizoic Coccidia Of Reptiles, I. M. Asmundsson, Donald W. Duszynski, J. A. Campbell

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

During a survey of Guatemalan herpetofauna in the summers of 1998–2000, 29 presumed new species of Eimeria Schneider, 1875 were found, seven of which have a distinct elongate-ellipsoidal shape (L/W ratio ≥ 1.7) and are described herein. Six of the seven new species are similar in oöcyst length, width and L/W ratio and sporocyst length, width and L/W ratio, lack a micropyle, oöcyst residuum, Stieda body, sub- and parastieda bodies, have a polar granule and sporocyst residuum, and their sporocysts appear to have dehiscence sutures. The seventh is slightly smaller and has sporocysts with a Stieda body. The new species …

Privies And Parasites: The Archaeology Of Health Conditions In Albany, New York, Charles L. Fisher, Karl Reinhard, Matthew Kirk, Justin Divirgilo

Karl Reinhard Publications

Large numbers of parasites were identified in archaeological samples collected from privies and other features in excavations in Albany, New York. This information provides the largest database available for the study of parasite infections in historical period American cities. The greatest numbers of parasites were in contexts related to the expansion of the city in the late-18th century. Parasites remained, but their quantities decreased in the 19th century during another period of rapid population growth. The city was able to control parasite infection during this period through several means, including new techniques of privy construction, new water supply systems, and …

A Coprological View Of Ancestral Pueblo Cannibalism Debate Over A Single Fecal Fossil Offers A Cautionary Tale Of The Interplay Between Science And Culture, Karl J. Reinhard

Karl Reinhard Publications

As the object of my scientific study, I’ve chosen coprolites. It’s not a common choice, but to a paleonutritionist and archaeoparasitologist, a coprolite—a sample of ancient feces preserved by mineralization or simple drying—is a scientific bonanza. Analysis of coprolites can shed light on both the nutrition of and parasites found in prehistoric cultures. Dietary reconstructions from the analysis of coprolites can inform us about, for example, the origins of modern Native American diabetes. With regard to parasitology, coprolites hold information about the ancient emergence and spread of human infectious disease. Most sensational, however, is the recent role of coprolite analysis …

Sl1 Rna Gene Recovery From Enterobius Vermicularis Ancient Dna In Pre-Columbian Human Coprolites, Alena M. Iñiguez, Karl Reinhard, Marcelo Luiz Carvalho Gonçalves, Luiz Fernando Ferreira, Adauto Araújo, Ana Carolina Paulo Vincente

Karl Reinhard Publications

Enterobius vermicularis, pinworm, is one of the most common helminths worldwide, infecting nearly a billion people at all socio-economic levels. In prehistoric populations the paleoparasitological findings show a pinworm homogeneous distribution among hunter-gatherers in North America, intensified with the advent of agriculture. This same increase also occurred in the transition from nomad hunter-gatherers to sedentary farmers in South America, although E. vermicularis infection encompasses only the ancient Andean peoples, with no record among the pre-Colombian populations in the South American lowlands. However, the outline of pinworm paleo epidemiology has been supported by microscopic finding of eggs recovered from coprolites. …

Psettarium Anthicum Sp. N. (Digenea: Sanguinicolidae) From The Heart Of Cobia Rachycentron Canadum (Rachycentridae) In The Northern Gulf Of Mexico, Stephen A. Bullard, Robin M. Overstreet

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Psettarium anthicum sp. n. (Digenea: Sanguinicolidae) infects the myocardium and atrial wall of the cobia Rachycentron canadum (Linnaeus, 1766) (Rachycentridae) in the northern Gulf of Mexico off Mississippi, USA. It is the first member of Psettarium Goto et Ozaki, 1930 reported from other than the Indian Ocean or Pacific Ocean and the second species of the genus reported from cobia. It differs from its congeners by the combination of having posterior caeca with lateral projections appearing as thorns in lateral view and the male pore anterior to the oötype. The species of Psettarium, P. japonicum (Goto et Ozaki, 1929) …

A Review Of Polylekithum Arnold 1934 And Its Familial Affinities Using Morphological And Molecular Data, With Description Of Polylekithum Catahoulensis Sp. Nov., Stephen S. Curran, Vasyl V. Tkach, Robin M. Overstreet

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

The type material of Polylekithum ictaluri, P. halli, and Maculifer chandleri was examined from the United States National Parasite Museum, and we determined that the material was conspecific, making P. halli and M. chandleri junior subjective synonyms of P. ictaluri. Polylekithum catahoulensis sp. nov. was described from material collected from catfishes at the Catahoula Wildlife Refuge, LaSalle Parish, Louisiana, USA, and compared with P. ictaluri collected from catfishes in Reelfoot Lake, Obion County, Tennessee, USA, and the Pearl River, Hancock County, Mississippi, USA. Polylekithum catahoulensis had smaller eggs (77-–88 μm long by 51–-63 µm wide vs. 94–-108 …

Parelaphostrongylus Odocoilei In Columbia Black-Tailed Deer From Oregon, Jack A. Mortenson, Arthur Abrams, Benjamin M. Rosenthal, Detiger Dunams, Eric P. Hoberg, Robert J. Bildfell, Richard L. Green

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Documenting the occurrence of Parelaphostrongylus odocoilei has historically relied on the morphological examination of adult worms collected from the skeletal muscle of definitive hosts, including deer. Recent advances in the knowledge of protostrongylid genetic sequences now permit larvae to be identified. Dorsal-spined larvae (DSLs) collected in 2003–2004 from the lung and feces of six Columbian black-tailed deer (Odocoileus hemionus columbianus) from Oregon were characterized genetically. The sequences from unknown DSLs were compared to those from morphologically validated adults and larvae of P. odocoilei at both the second internal transcribed spacer (ITS-2) of ribosomal DNA and the mitochondrial cytochrome …

Progress In Diagnosis, Treatment And Elimination Of Echinococcosis And Cysticercosis, Peter M. Schantz

Other Publications in Zoonotics and Wildlife Disease

Here I review the current status of geographical occurrence and public health significance of echinococcosis (Echinococcus spp. infections) and cysticercosis (Taenia solium infection) with special emphasis on the remarkable technologic progress achieved in recent decades that has led to greater understanding of the biology and epidemiology of these cestode infections. The greatest remaining challenges are to apply this knowledge and technology to improved medical management and prevention of these infections.

Sex-Specific Expression Of Alternative Transcripts In Drosophila, Lauren Mcintyre, Lisa Bono, Anne Genissel, Rick Westerman, Damion Junk, Marina Telonis-Scott, Lawrence G. Harshman, Marta Wayne, Artyom Kopp, Sergey V. Nuzhdin

School of Biological Sciences: Faculty Publications

Background: Many genes produce multiple transcripts due to alternative splicing or utilization of alternative transcription initiation/termination sites. This 'transcriptome expansion' is thought to increase phenotypic complexity by allowing a single locus to produce several functionally distinct proteins. However, sex, genetic and developmental variation in the representation of alternative transcripts has never been examined systematically. Here, we describe a genome-wide analysis of sex-specific expression of alternative transcripts in Drosophila melanogaster.

Results: We compared transcript profiles in males and females from eight Drosophila lines (OregonR and 2b, and 6 RIL) using a newly designed 60-mer oligonucleotide microarray that allows us …

Wing Dimorphism In Aphids, Christian Braendle, Gregory K. Davis, Jennifer A. Brisson, David L. Stern

School of Biological Sciences: Faculty Publications

Many species of insects display dispersing and nondispersing morphs. Among these, aphids are one of the best examples of taxa that have evolved specialized morphs for dispersal versus reproduction. The dispersing morphs typically possess a full set of wings as well as a sensory and reproductive physiology that is adapted to flight and reproducing in a new location. In contrast, the nondispersing morphs are wingless and show adaptations to maximize fecundity. In this review, we provide an overview of the major features of the aphid wing dimorphism. We first provide a description of the dimorphism and an overview of its …

Spillover Of Agriculturally Subsidized Predators As A Potential Threat To Native Insect Herbivores In Fragmented Landscapes, Tatyana A. Rand, Svata M. Louda

School of Biological Sciences: Faculty Publications

Habitat loss and fragmentation can have strong negative impacts on populations of some native species. Spillover of generalist natural enemies from the surrounding landscape matrix is one mechanism potentially generating such effects, yet this has been rarely studied in insects. We examined the influence of habitat conversion to agriculture on the abundance and potential effects of predatory coccinellid beetles on native insect herbivores within 12 grassland remnants in central Nebraska (U.S.A.). Results of sweep sampling revealed that coccinellids were three to six times more abundant at native grassland sites embedded within cropland- dominated landscapes compared with control sites in grassland-dominated …

Assembly Of The Eastern North American Herpetofauna: New Evidence From Lizards And Frogs, J. Robert Macy, James A. Schulte Ii, Jared L. Strasburg, Jennifer A. Brisson, Allan Larson, Natalia B. Ananjeva, Yuezhao Wang, James F. Parham, Theodore J. Papenfuss

School of Biological Sciences: Faculty Publications

Darwin first recognized the importance of episodic intercontinental dispersal in the establishment of worldwide biotic diversity. Faunal exchange across the Bering Land Bridge is a major example of such dispersal. Here, we demonstrate with mitochondrial DNA evidence that three independent dispersal events from Asia to North America are the source for almost all lizard taxa found in continental eastern North America. Two other dispersal events across Beringia account for observed diversity among North American ranid frogs, one of the most species-rich groups of frogs in eastern North America. The contribution of faunal elements from Asia via dispersal across Beringia is …

The Developmental And Molecular Basis Of Allometry In Drosophila, Alexander W. Shingleton, Jennifer A. Brisson, David L. Stern

School of Biological Sciences: Faculty Publications

Allometry is the scaling relationship between the size of an organism and the size of its constituent parts. Despite its obvious developmental and evolutionary importance, very little is known of the mechanisms that regulate allometries. Here, we look at one particular type of allometry—that created by rearing Drosophila under different nutritional conditions. Drosophila larvae that are fed increasingly suboptimal diets eclose into increasingly small adults with increasingly small body parts. Surprisingly, however, the male genitals remain approximately the same size under a range of nutritional conditions. The genitals therefore maintain a different allometric relationship with the body than other structures. …

Phylogenetics Of The Florally Diverse Andean Clade Iochrominae (Solanaceae), Stacey Dewitt Smith, David A. Baum

School of Biological Sciences: Faculty Publications

Recent molecular phylogenetic studies of Solanaceae have identified many well-supported clades within the family and have permitted the creation of a phylogenetic system of classification. Here we estimate the phylogeny for Iochrominae, a clade of Physaleae sensu Olmstead et al. (1999), which contains 34 Andean species encompassing an immense diversity of floral forms and colors. Using three nuclear regions, ITS, the second intron of LEAFY, and exons 2 to 9 of the granule-bound starch synthase gene (waxy), we evaluated the monophyly of the traditional genera comprising Iochrominae and assessed the extent of interspecific hybridization within the clade. …

Microorganisms Pumping Iron: Anaerobic Microbial Iron Oxidation And Reduction, Karrie A. Weber, Laurie A. Achenbach, John D. Coates

School of Biological Sciences: Faculty Publications

Iron (Fe) has long been a recognized physiological requirement for life, yet for many microorganisms that persist in water, soils and sediments, its role extends well beyond that of a nutritional necessity. Fe(II) can function as an electron source for iron-oxidizing microorganisms under both oxic and anoxic conditions and Fe(III) can function as a terminal electron acceptor under anoxic conditions for iron-reducing microorganisms. Given that iron is the fourth most abundant element in the Earth’s crust, iron redox reactions have the potential to support substantial microbial populations in soil and sedimentary environments. As such, biological iron apportionment has been described …

Anaerobic Redox Cycling Of Iron By Freshwater Sediment Microorganisms, Karrie A. Weber, Matilde M. Urrutia, Perry F. Churchill, Ravi K. Kukkadapu, Eric E. Roden

School of Biological Sciences: Faculty Publications

The potential for microbially mediated anaerobic redox cycling of iron (Fe) was examined in a first-generation enrichment culture of freshwater wetland sediment microorganisms. Most probable number enumerations revealed the presence of significant populations of Fe(III)-reducing (approximately 10⁸ cells ml^-1 ) and Fe(II)-oxidizing, nitrate-reducing organisms (approximately 10⁵ cells ml^-1 ) in the freshwater sediment used to inoculate the enrichment cultures. Nitrate reduction commenced immediately following inoculation of acetate-containing (approximately 1 mM) medium with a small quantity (1% v/v) of wetland sediment, and resulted in the transient accumulation of NO₂^– and production of a mixture of …

Protein Binding Site Prediction Using An Empirical Scoring Function, Shide Liang, Chi Zhang, Song Liu, Yaoqi Zhou

School of Biological Sciences: Faculty Publications

Most biological processes are mediated by interactions between proteins and their interacting partners including proteins, nucleic acids and small molecules. This work establishes a method called PINUP for binding site prediction of monomeric proteins. With only two weight parameters to optimize, PINUP produces not only 42.2% coverage of actual interfaces (percentage of correctly predicted interface residues in actual interface residues) but also 44.5% accuracy in predicted interfaces (percentage of correctly predicted interface residues in the predicted interface residues) in a cross validation using a 57-protein dataset. By comparison, the expected accuracy via random prediction (percentage of actual interface residues in …

Incorporating Animal Behavior Into Seed Dispersal Models: Implications For Seed Shadows, Sabrina E. Russo, Stephen Portnoy, Carol K. Augspurger

School of Biological Sciences: Faculty Publications

Seed dispersal fundamentally influences plant population and community dynamics but is difficult to quantify directly. Consequently, models are frequently used to describe the seed shadow (the seed deposition pattern of a plant population). For vertebrate dispersed plants, animal behavior is known to influence seed shadows but is poorly integrated in seed dispersal models. Here, we illustrate a modeling approach that incorporates animal behavior and develop a stochastic, spatially explicit simulation model that predicts the seed shadow for a primate-dispersed tree species (Virola calophylla, Myristicaceae) at the forest stand scale. The model was parameterized from field-collected data on …

Review Of To Save The Wild Bison: Life On The Edge In Yellowstone By Mary Ann Franke, David Nesheim

Department of History: Dissertations, Theses, and Student Research

Mary Ann Franke investigates the recent controversy regarding the Yellowstone bison and the efforts to control their movements, the longer history of their management in the twentieth century, and a brief natural history of the species.

Redeeming The Time: Protestant Missionaries And The Social And Cultural Development Of Territorial Nebraska, Robert J. Voss

Department of History: Dissertations, Theses, and Student Research

The passage of the Kansas-Nebraska Act in May of 1854 formally opened a new region of the United States to settlers. Hundreds came with news of the creation of Nebraska Territory, but not in comparable numbers to the major western migrations that would follow after the Civil War. Instead, the initial small waves of Nebraska settlers would cling to the Missouri River and its settlements establishing communities on the eastern edges in the newly opened territory. These first settlers set the foundations for culture and society in Nebraska.

From 1854 until 1860, pioneers claimed lands near the Missouri, with few …

Impact Of Tillage And Placement Of Terbufos Insecticide Runoff, Mitiku Mamo, William L. Kranz, Elaine R. Douskey, Shripat T. Kamble, John F. Witkowski

Biological Systems Engineering: Papers and Publications

On a national scale, the damage caused by corn rootworm (Diabrotica virgifera virgifera LeConte), can cause economic loss of up to $650 million annually. To limit these losses, corn producers apply terbufos insecticide to approximately 11% of all corn acres at a time when there is a high probability of intense precipitation. When combined with low vegetative cover and disturbed soil surfaces, there is a high potential for terbufos transport into surface water bodies. Increased public concern for environmental contamination from the use of agricultural chemicals has prompted many crop growers to look for crop production practices that minimize …

Hyla Squirella (Squirrel Treefrog): Refugia., Louis A. Somma, David Serrano

Papers in Herpetology

HYLA SQUiREUA (Squirrel Treefrog). REFUGIA. Entomologists commonly use trap-nests to monitor cavity-nesting Hymenoptera. These trap-nests consist of 5 x 10 cm pine timber cut into 12-cm lengths. Five lengths are then stacked and strapped together. Each pIece of timber is predrilled in each side to have either a 3.2, 4.8, 6.4, 7.9, or 12.7 Iiundiameterhole, 8 cmindepth. Thus, each trap-nest consisted of five pieces of wood containing 2 holes of each diameter. They are suspended with wire from tree trunks and branches. We set these wooden traps (N = 10) at Devil's Millhopper Geological State Park, Gainesville, Alachua Co., Florida, …

Use Of Sediment Rating Curves And Optical Backscatter Data To Characterize Sediment Transport In The Upper Yuba River Watershed, California, 2001–03, Jennifer A. Curtis, Lorraine E. Flint, Charles N. Alpers, Scott A. Wright, Noah P. Snyder

Publications of the US Geological Survey

Sediment transport in the upper Yuba River watershed, California, was evaluated from October 2001 through September 2003. This report presents results of a three-year study by the U.S. Geological Survey, in cooperation with the California Ecosystem Restoration Program of the California Bay–Delta Authority and the California Resources Agency. Streamflow and suspended-sediment concentration (SSC) samples were collected at four gaging stations; however, this report focuses on sediment transport at the Middle Yuba River (11410000) and the South Yuba River (11417500) gaging stations. Seasonal suspended-sediment rating curves were developed using a group-average method and non-linear least-squares regression. Bed-load transport relations were used …