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Conservation And Variation Of Dna Methylation In Lactuca Sativa And Lactuca Serriola, Trudi A. Baker
Conservation And Variation Of Dna Methylation In Lactuca Sativa And Lactuca Serriola, Trudi A. Baker
Graduate Doctoral Dissertations
Molecular techniques for guiding plant breeding have successfully used wild progenitors of domestic crops as sources of genetic variants conveying desirable traits. However, epigenetic variation, in particular DNA methylation, is a significant source of phenotypic variation and epigenetic effects of plant domestication are poorly understood. Described herein are the first single-base pair resolution methylomes of the highly valued crop iceberg lettuce (Lactuca sativa cv. Salinas) and its close relative, and ubiquitous weed, L. serriola. This work suggests several roles for acquisition and inheritance of methylation in the evolution of Lactuca spp. in response to stress. The Lactuca spp. have conserved …
Five Fundamental Gaps In Nature-Nurture Science, Peter J. Taylor
Five Fundamental Gaps In Nature-Nurture Science, Peter J. Taylor
Working Papers on Science in a Changing World
Difficulties identifying causally relevant genetic variants underlying patterns of human variation have been given competing interpretations. The debate is illuminated in this article by drawing attention to the issue of underlying heterogeneity—the possibility that genetic and environmental factors or entities underlying a trait are heterogeneous—as well as four other fundamental gaps in the methods and interpretation of classical quantitative genetics: "Genetic" and "environmental" fractions of variation in traits are distinct from measurable genetic and environmental factors underlying the traits’ development; Standard formulas for partitioning variation in human traits are unreliable; Methods for translation from fractions of variation to measurable …
Troubled By Heterogeneity? Control, Infrastructure & Participation In Social Epidemiology And Life Course Development, Peter J. Taylor
Troubled By Heterogeneity? Control, Infrastructure & Participation In Social Epidemiology And Life Course Development, Peter J. Taylor
Working Papers on Science in a Changing World
This working paper presents the panels of a poster prepared for a conference, “Complex Systems, Health Disparities, and Population Health: Building Bridges,” held at NIH in Bethesda, MD in February 2014. Just as poster presenters hope viewers stop and talk, my aim in sharing the panels as a working paper is to elicit more conversation about different kinds of heterogeneity and the ways they are addressed or suppressed in social epidemiology and life course development. The thinking behind this concern is as follows. The two foundational developments of modern biology—the theories of evolution by natural selection and the genetic basis …
Heterogeneity And Data Analysis, Peter J. Taylor
Heterogeneity And Data Analysis, Peter J. Taylor
Working Papers on Science in a Changing World
This working paper is a discussion paper for a September 2011 meeting of the research group of Prof. Di Cook on data visualization and exploratory data analysis at Iowa State University. A taxonomy of eleven kinds of heterogeneity is presented, followed by a set of vignettes that illustrate some of the meanings and sketch some implications, then a series of images that illustrate the heterogeneities. Several of the vignettes speak to a broad contention about heterogeneity and control: In relation to modern understandings of heredity and development over the life course, research and application of resulting knowledge are untroubled by …