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Gain-Of-Function Polymorphisms In Human Inflammasomes: Implications For Cystic Fibrosis, Duane Jeansonne, Samithamby Jeyaseelan Aug 2021

Gain-Of-Function Polymorphisms In Human Inflammasomes: Implications For Cystic Fibrosis, Duane Jeansonne, Samithamby Jeyaseelan

Faculty Publications

No abstract provided.


Light Emitting Diode (Led) Color And Broiler Growth: Effect Of Supplementing Blue/Green Led To White Led Light On Broiler Growth, Stress, And Welfare, Jill R. Nelson, Joey L. Bray, Juliette Delabbio, Gregory S. Archer Jan 2020

Light Emitting Diode (Led) Color And Broiler Growth: Effect Of Supplementing Blue/Green Led To White Led Light On Broiler Growth, Stress, And Welfare, Jill R. Nelson, Joey L. Bray, Juliette Delabbio, Gregory S. Archer

Faculty Publications

Light emitting diode (LED) lighting provides an affordable lighting option for use in commercial poultry production. However, more information is needed to understand the effects of LED color on broiler welfare and growth. Five consecutive flocks (1 in summer, 1 in fall, 2 in winter, and 1 in spring) of straight run Ross 708 × Ross 708 broilers were reared in commercial type barns for 45 D. For white only (WO) treatment, birds were reared under white LED only (Agrishift MLB). For white supplemented (WS) treatment, birds were reared under white LED (Agrishift MLB) in the center aisle, with supplemental …


Comparison Of An Intermittent, Short-Dawn/Dusk Photoperiod With An Increasing, Long-Dawn/Dusk Photoperiod On Broiler Growth, Stress, And Welfare, Jill R. Nelson, Joey L. Bray, Juliette Delabbio, Gregory S. Archer Jan 2020

Comparison Of An Intermittent, Short-Dawn/Dusk Photoperiod With An Increasing, Long-Dawn/Dusk Photoperiod On Broiler Growth, Stress, And Welfare, Jill R. Nelson, Joey L. Bray, Juliette Delabbio, Gregory S. Archer

Faculty Publications

Photoperiod has been shown to significantly affect broiler performance. However, the effects of the traditional 1-min dimming period on broiler growth and welfare are unclear. In this study, 4 consecutive trials were conducted to compare the effects of an intermittent, short-dawn/dusk photoperiod (ISD) to an increasing, long-dawn/dusk photoperiod (ILD) on broiler growth, stress, and welfare. Straight run day-of-hatch Ross 708 × Ross 708 broilers were placed in 1 of 4 commercial broiler barns (2 b of 26,200 birds each per treatment) and grown to 45 D of age. The photoperiod in the ISD treatment consisted of 24L:0D day 0 to …


Artificial Intelligence And Covid-19: Deep Learning Approaches For Diagnosis And Treatment, M. B. Jamshidi, A. Lalbakhsh, J. Talla, Z. Peroutka, F. Hadjilooei, P Lalbakhsh, M. Jamshidi, L. La Spada, M. Mirmozafari, M. Dehghani, A. Sabet, Sa. Roshani, So. Roshani, N. Bayat-Makou, B. Mohamadzade, Z. Malek, A. Jamshidi, S. Kiani, H. Hashemi-Dezaki, W. Mohyuddin Jan 2020

Artificial Intelligence And Covid-19: Deep Learning Approaches For Diagnosis And Treatment, M. B. Jamshidi, A. Lalbakhsh, J. Talla, Z. Peroutka, F. Hadjilooei, P Lalbakhsh, M. Jamshidi, L. La Spada, M. Mirmozafari, M. Dehghani, A. Sabet, Sa. Roshani, So. Roshani, N. Bayat-Makou, B. Mohamadzade, Z. Malek, A. Jamshidi, S. Kiani, H. Hashemi-Dezaki, W. Mohyuddin

Faculty Publications

COVID-19 outbreak has put the whole world in an unprecedented difficult situation bringing life around the world to a frightening halt and claiming thousands of lives. Due to COVID-19 & x2019;s spread in 212 countries and territories and increasing numbers of infected cases and death tolls mounting to 5,212,172 and 334,915 (as of May 22 2020), it remains a real threat to the public health system. This paper renders a response to combat the virus through Artificial Intelligence (AI). Some Deep Learning (DL) methods have been illustrated to reach this goal, including Generative Adversarial Networks (GANs), Extreme Learning Machine (ELM), …


Utilization Of Pyrosequencing To Monitor The Microbiome Dynamics Of Probiotic Treated Poultry (Gallus Gallus Domesticus) During Downstream Poultry Processing, Vamsy Priya Guttala, Enrique G. Medrano, Joey Bray, Beatrice Clack Jan 2017

Utilization Of Pyrosequencing To Monitor The Microbiome Dynamics Of Probiotic Treated Poultry (Gallus Gallus Domesticus) During Downstream Poultry Processing, Vamsy Priya Guttala, Enrique G. Medrano, Joey Bray, Beatrice Clack

Faculty Publications

Antibiotic growth promoters that have been historically employed to control pathogens and increase the rate of animal development for human consumption are currently banned in many countries. Probiotics have been proposed as an alternative to control pathogenic bacteria. Traditional culture methods typically used to monitor probiotic effects on pathogens possess significant limitations such as a lack in sensitivity to detect fastidious and non-culturable bacteria, and are both time consuming and costly. Here, we tested next generation pyrosequencing technology as a streamline and economical method to monitor the effects of a probiotic on microbial communities in juvenile poultry (Gallus gallus …


High Throughput Genomic Sequencing Of Bioaerosols In Broiler Chicken Production Facilities, Kate M. O’Brien, Michael S. Chimenti, Morgan Farnell, Tom Tabler, Thomas Bair, Joey Lynn Bray, Matthew W. Nonnenmann Jan 2016

High Throughput Genomic Sequencing Of Bioaerosols In Broiler Chicken Production Facilities, Kate M. O’Brien, Michael S. Chimenti, Morgan Farnell, Tom Tabler, Thomas Bair, Joey Lynn Bray, Matthew W. Nonnenmann

Faculty Publications

Chronic inhalation exposure to agricultural dust promotes the development of chronic respiratory diseases among poultry workers. Poultry dust is composed of dander, chicken feed, litter bedding and microbes. However, the microbial composition and abundance has not been fully elucidated. Genomic DNA was extracted from settled dust and personal inhalable dust collected while performing litter sampling or mortality collection tasks. DNA libraries were sequenced using a paired-end sequencing-by-synthesis approach on an Illumina HiSeq 2500. Sequencing data showed that poultry dust is predominantly composed of bacteria (64–67%) with a small quantity of avian, human and feed DNA (< 2% of total reads). Staphylococcus sp. AL1, Salinicoccus carnicancri and Lactobacillus crispatus were the most abundant bacterial species in personal exposure samples of inhalable dust. Settled dust had a moderate relative abundance of these species as well as Staphylococcus lentus and Lactobacillus salivarius. There was a statistical difference between the microbial composition of aerosolized and settled dust. Unlike settled dust composition, aerosolized dust composition had little variance between samples. These data provide an extensive analysis of the microbial composition and relative abundance in personal inhalable poultry dust and settled poultry dust.


Failure Of A Heterologous Recombinant Sca5/Ompb Protein-Based Vaccine To Elicit Effective Protective Immunity Against Rickettsia Rickettsii Infections In C3h/Hen Mice, Sean P. Riley, Marissa M. Cardwell, Yvonne G. Chan, Ludovic Pruneau, Fabio Del Piero, Juan J. Martinez Dec 2015

Failure Of A Heterologous Recombinant Sca5/Ompb Protein-Based Vaccine To Elicit Effective Protective Immunity Against Rickettsia Rickettsii Infections In C3h/Hen Mice, Sean P. Riley, Marissa M. Cardwell, Yvonne G. Chan, Ludovic Pruneau, Fabio Del Piero, Juan J. Martinez

Faculty Publications

Spotted fever group (SFG) rickettsial species are obligate intracellular tick-borne pathogens that are responsible for important human diseases. Previous reports have demonstrated the feasibility of using recombinant surface cell antigen Sca5/OmpB to elicit protective immunity against homologous challenges using murine models of Mediterranean spotted fever and Rocky Mountain spotted fever. In addition, the feasibility of generating cross-protective immunity against related rickettsial species has also been established, but the molecular basis for these phenomena was not explored. Here, we demonstrate that vaccination of C3H/HeN mice with a recombinant OmpB domain derived from Rickettsia conorii induced high titer humoral immune responses that …


Exposure Of Workers To Dust And Bioaerosol On A Poultry Farm, Sheryll B. Jerez, Y. Cheng, Joey Bray Jan 2014

Exposure Of Workers To Dust And Bioaerosol On A Poultry Farm, Sheryll B. Jerez, Y. Cheng, Joey Bray

Faculty Publications

Poultry houses are known for generating excessive dust, which originates from bedding materials, fiberglass insulations, feed, dried fecal materials, and feather particles. Dust may contain microorganisms, including endotoxins, fungi, and bacteria, that may affect living things when inhaled. Dust that contains living organisms is referred to as bioaerosol, and its particle size may range from 0.5 to 100 µm. Respirable dust, which has an aerodynamic diameter of less than or equal to 4 µm, can travel to and be deposited in the gas-exchange region of the human respiratory system. This is of particular concern because of the greater health hazard …


Evaluation Of Electrostatic Particle Ionization And Biocurtain™ Technologies To Reduce Air Pollutants From Broiler Houses, Sheryll B. Jerez, W Faulkner, K. D. Casey, M S. Borhan, R. A. Smith Jan 2013

Evaluation Of Electrostatic Particle Ionization And Biocurtain™ Technologies To Reduce Air Pollutants From Broiler Houses, Sheryll B. Jerez, W Faulkner, K. D. Casey, M S. Borhan, R. A. Smith

Faculty Publications

The continuing growth of poultry production, along with the increasing urbanization of rural areas, is leading to more odor-related complaints from neighboring communities and more scrutiny from policy makers. It is, therefore, in the best interest of poultry producers to look at control methods for abating odors. Previous studies have shown that substantial amounts of volatile and odorous compounds are adsorbed and transported by dust particles. Thus, by reducing the amount of dust emitted from poultry facilities such as broiler houses, odor may be reduced as well. The objective of this study was to evaluate the effectiveness of two commercially …


Seasonal Variation In Offspring Sex Ratio In The Snowy Plover, Sarah T. Saalfeld, Warren C. Conway, David A. Haukos, William P. Johnson Jan 2013

Seasonal Variation In Offspring Sex Ratio In The Snowy Plover, Sarah T. Saalfeld, Warren C. Conway, David A. Haukos, William P. Johnson

Faculty Publications

The Snowy Plover (Charadrius nivosus) is unique in being a determinate layer of an odd modal clutch size and in having a variable mating system in which female brood desertion occurs regularly. These traits make determining Snowy Plover offspring sex ratios important not only for long-term population stability, as the species is of conservation concern, but also for application to sex allocation theory. In this study, we determined Snowy Plover offspring sex ratios, examined differential costs of producing male and female offspring, and evaluated sex ratio variation in relation to maternal condition, habitat condition, and time during the …


Parsimony And Model-Based Analyses Of Indels In Avian Nuclear Genes Reveal Congruent And Incongruent Phylogenetic Signals, Tamaki Yuri, Rebecca T. Kimball, John Harshman, Rauri C.K. Bowie, Michael J. Braun, Jena L. Chojnowski, Kin-Lan Han, Shannon J. Hackett, Christopher J. Huddleston, William S. Moore, Sushma Reddy, Frederick H. Sheldon, David W. Steadman, Christopher C. Witt, Edward L. Braun Jan 2013

Parsimony And Model-Based Analyses Of Indels In Avian Nuclear Genes Reveal Congruent And Incongruent Phylogenetic Signals, Tamaki Yuri, Rebecca T. Kimball, John Harshman, Rauri C.K. Bowie, Michael J. Braun, Jena L. Chojnowski, Kin-Lan Han, Shannon J. Hackett, Christopher J. Huddleston, William S. Moore, Sushma Reddy, Frederick H. Sheldon, David W. Steadman, Christopher C. Witt, Edward L. Braun

Faculty Publications

Insertion/deletion (indel) mutations, which are represented by gaps in multiple sequence alignments, have been used to examine phylogenetic hypotheses for some time. However, most analyses combine gap data with the nucleotide sequences in which they are embedded, probably because most phylogenetic datasets include few gap characters. Here, we report analyses of 12,030 gap characters from an alignment of avian nuclear genes using maximum parsimony (MP) and a simple maximum likelihood (ML) framework. Both trees were similar, and they exhibited almost all of the strongly supported relationships in the nucleotide tree, although neither gap tree supported many relationships that have proven …


Lakewood Farm: The Private Zoo That The Public Loved, Geoffrey D. Reynolds Jan 2010

Lakewood Farm: The Private Zoo That The Public Loved, Geoffrey D. Reynolds

Faculty Publications

Lakewood Farm: The Private Zoo That the Public Loved is an article concerning the private zoo in Holland, Michigan, that was owned by Chicago coal merchant George Fulmer Getz and helped form the Illionois based Brookfiekd Zoo and John Ball Zoo of Grand Rapids, Michigan.


Performance Comparison Between The Use And Nonuse Of An Enteric Health Medication Program Across Five Consecutive Commercial Broiler Flocks, Joey Lynn Bray, C. S. Taylor, T. E. Cherry, J. Carey Jan 2009

Performance Comparison Between The Use And Nonuse Of An Enteric Health Medication Program Across Five Consecutive Commercial Broiler Flocks, Joey Lynn Bray, C. S. Taylor, T. E. Cherry, J. Carey

Faculty Publications

A study was conducted to examine broiler performance and carcass yield across 5 consecutive commercial broiler flocks after the removal of roxarsone (ROX) and growth-promoting antibiotics (GPA) from the feed. Over a 1-yr period, approximately 552,000 broilers were reared in 4 solid-walled, tunnel-ventilated houses, divided into 2 paired-house facilities, and were assigned 1 of 2 dietary treatments. The treated group received basal diets containing salinomycin, ROX, and GPA, whereas the control group received the same diets without ROX and GPA. Average BW were recorded for 200 sample birds/treatment per flock at 18, 35, and 48 d of age. Average BW, …


Intestinal Microbial Ecology Of Broilers Vaccinated And Challenged With Mixed Eimeria Species, And Supplemented With Essential Oil Blends, E. O. Oviedo Rondon, M. E. Hume, C. Hernandez, S. Clemente-Hernandez Jan 2006

Intestinal Microbial Ecology Of Broilers Vaccinated And Challenged With Mixed Eimeria Species, And Supplemented With Essential Oil Blends, E. O. Oviedo Rondon, M. E. Hume, C. Hernandez, S. Clemente-Hernandez

Faculty Publications

Intestinal microbiota is an important component in the development of defense mechanisms in the gut mucosa. This project determined the dynamics of intestinal microbial communities (MC) of broilers vaccinated at first day of age with live oocysts of Eimeria species and fed diets supplemented with 2 specific essential oil (EO) blends, Crina Poultry (CP) and Crina Alternate (CA). Five treatments were analyzed: 1) unmedicated-uninfected (UU) control; 2) unmedicated-infected (UI) control; 3) vaccinated with Advent cocci-vaccine and without feed additive (COV) supplements; 4) vaccinated with Advent and supplemented with CP; and 5) vaccinated with Advent and supplemented with CA. The EO …


Responses Of Coccidia-Vaccinated Broilers To Essential Oil Blends Supplementation Up To Forty-Nine Days Of Age, E. O. Oviedo Rondon, S. Clemente-Hernandez, P. Williams, R. Losa Jan 2005

Responses Of Coccidia-Vaccinated Broilers To Essential Oil Blends Supplementation Up To Forty-Nine Days Of Age, E. O. Oviedo Rondon, S. Clemente-Hernandez, P. Williams, R. Losa

Faculty Publications

Coccidiosis control may become a greater problem as the use of growth-promoting antibiotics (GPA) and ionophores declines. Vaccination with live oocysts may turn into a popular alternative to the use of coccidiostats in broilers, although cocci vaccination is frequently linked to temporary lower performance in young flocks. This experiment evaluates the dietary supplementation of 2 specific essential oil (EO) blends (Crina Poultry and Crina Alternate), either as alternatives to GPA and ionophores (BMD + Coban) or as feed additives that help to improve the performance of cocci-vaccinated broilers. Live performance and lesion scores were observed. These 2 specific EO blends …


Requirements Of Sodium And Chloride By Leghorn Laying Hens, A. E. Murakami, M. I. Sakamoto, J. R. G. Franco, E. N. Martins, E. O. Oviedo Rondon Jan 2003

Requirements Of Sodium And Chloride By Leghorn Laying Hens, A. E. Murakami, M. I. Sakamoto, J. R. G. Franco, E. N. Martins, E. O. Oviedo Rondon

Faculty Publications

Sodium and Cl are low-cost nutrients with great influence on feed conversion ratio (FCR), eggshell quality, and excreta moisture. Actual values of dietary requirements of these minerals for commercial laying hens are not well defined. These requirements were reevaluated in a factorial experiment using corn-soybean meal basal diets. No significant influence of Na and Cl levels was observed on egg production (%), egg weight (g), or feed intake (g/d), but levels of these minerals had variable effects on FCR, eggshell quality, and excreta moisture. The optimum requirement of Na changed according to the variable evaluated and level of Cl used.


Effect Of Electrolyte Balance In Low-Protein Diets On Broiler Performance And Tibial Dyschondroplasia Incidence, A. E. Murakami, J. R. G. Franco, E. N. Martins, E. O. Oviedo Rondon, M. I. Sakamoto, M. S. Pereira Jan 2003

Effect Of Electrolyte Balance In Low-Protein Diets On Broiler Performance And Tibial Dyschondroplasia Incidence, A. E. Murakami, J. R. G. Franco, E. N. Martins, E. O. Oviedo Rondon, M. I. Sakamoto, M. S. Pereira

Faculty Publications

A proper dietary electrolyte balance (DEB) is essential to ensure an optimum acid-base equilibrium and broiler performance. In low-CP diets, this balance can be affected by reduction of soybean meal and inclusion of high levels of synthetic amino acids. Although, some studies have related low-protein diets supplemented with amino acids and DEB, these relations are not well explained, because some research demonstrates confusion about the deficiency and balance of nutrients. The objective of these experiments was to evaluate the DEB effects of diets with low levels of protein supplemented with amino acids on broiler performance and bone development. Results indicated …


Survey Of Pathogens In Poultry Litter In The United States, Mac Terzich, Melody J. Pope, Tim E. Cherry, Jessie Hollinger Jan 2000

Survey Of Pathogens In Poultry Litter In The United States, Mac Terzich, Melody J. Pope, Tim E. Cherry, Jessie Hollinger

Faculty Publications

Poultry litter is one of many components resulting from the production of broilers. Understanding poultry litter microbiological composition is very beneficial when attempting to improve the broiler's environmental conditions and searching for the best uses for this valuable industry by-product. The objective of this study was to collect samples of poultry litter throughout the United States and determine the presence of bacteria in the litter. Tests were conducted for total bacteria, Gram negative bacteria, Gram positive bacteria, Staphylococcus, Escherichia coli, and coliforms. Poultry litter samples were taken from 12 different regions throughout the United States and were analyzed …


An Evaluation Of The Presence Of Pathogens On Broilers Raised On Poultry Litter Treatment-Treated Litter, M. J. Pope, T. E. Cherry Jan 2000

An Evaluation Of The Presence Of Pathogens On Broilers Raised On Poultry Litter Treatment-Treated Litter, M. J. Pope, T. E. Cherry

Faculty Publications

Two trials were conducted to evaluate the presence of salmonella, campylobacter, and generic Escherichia coli on broilers raised on Poultry Litter Treatment (PLT®)-enhanced litter in comparison with those raised on untreated litter. Two Company A farms included three houses on each farm as the treated group and three houses per farm as controls. Two complete growouts were evaluated on each farm. The Company B study included 10 farms with two paired houses per farm, one house as the treated group and one house as the control. One growout was evaluated per farm. The pathogen sampling consisted of litter sampling and …


Eyespray Vaccination: Infectivity And Development Of Immunity To Eimeria Acervulina And Eimeria Tenella, H. David Chapman, Tim E. Cherry Jan 1997

Eyespray Vaccination: Infectivity And Development Of Immunity To Eimeria Acervulina And Eimeria Tenella, H. David Chapman, Tim E. Cherry

Faculty Publications

The infectivity of a coccidiosis vaccine and its ability to immunize chickens against two species of Eimeria was examined. The vaccine was administered to newly-hatched chicks by spraying directly onto the eye. The method resulted in a high proportion of chicks infected with E. acervulina and E. tenella. Vaccinated birds reared in cages in the absence of reinfection did not develop immunity to either species by 4 wk of age, but birds reared in floor pens developed immunity to both E. acervulina and E. tenella.