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On Flavonoid Accumulation In Different Plant Parts: Variation Patterns Among Individuals And Populations In The Shore Campion (Silene Littorea), José C. Del Valle, Mª Luisa Buide, Inés Casimiro-Soriguer, Justen B. Whittall, Eduardo Narbona

Biology

The presence of anthocyanins in flowers and fruits is frequently attributed to attracting pollinators and dispersers. In vegetative organs, anthocyanins and other non-pigmented flavonoids such as flavones and flavonols may serve protective functions against UV radiation, cold, heat, drought, salinity, pathogens, and herbivores; thus, these compounds are usually produced as a plastic response to such stressors. Although, the independent accumulation of anthocyanins in reproductive and vegetative tissues is commonly postulated due to differential regulation, the accumulation of flavonoids within and among populations has never been thoroughly compared. Here, we investigated the shore campion (Silene littorea, Caryophyllaceae) which exhibits …

Species Diversity, Distribution And Seasonal Abundance In Mangrove Associated Molluscs Along The Karachi Coast, Pakistan, Zia Ullah, Itrat Zehra, Muhammad Asif Gondal

Journal of Bioresource Management

Mangrove or Mangal vegetation are typical wetland ecosystems found in coastal deposits of mud and silt throughout the tropics and some distance into the sub-tropical latitude. Species diversity, distribution, seasonal abundance in population and behavioral responses of mangrove associated molluscs (gastropods and bivalves) were investigated in two mangal areas: Sandspit and Korangi, along the Karachi coast of Pakistan. For sampling, a fixed route was followed throughout the study period and the samples were collected and observations were made from HTZ to LTZ. Fourteen species of molluscs (5 Prosobranchia; 6 Pulmonata; 1 Opisthobranchia and 2 Lamellibranchia) belonging to ten families were …

Biodiversity And Ecological Dynamics Of Sciophilous Benthic Communities On Artificial Plates: Emphasis On Reef Sponges, Caidra Elizabeth Hassanzada

HCNSO Student Theses and Dissertations

Low light intensity habitats harbor unique sciophilous benthic communities and are a source of novel and unique sponge fauna. However, the community structure of these habitats is poorly studied to date. Thus, this study attempts to understand the composition and structure of sciophilous sponge populations in southeast Florida. Fifty limestone plates were placed on a shallow reef in Fort Lauderdale for two years (2010-2012). To identify the sponge community and their patterns over time, all plates were photographed at the end of each year. Then, samples were taken from each of the live sponge specimens observed on the plates and …

Switchgrass Germplasm Resources, Michael D. Casler, Kenneth P. Vogel, Melanie Harrison

Department of Agronomy and Horticulture: Faculty Publications

Switchgrass (Panicum virgatum L.) is an important native grass and dominant member of the tallgrass prairie ecosystem. It is used for conservation, restoration, livestock feed production, and bioenergy feedstock production. The purpose of this review is to describe the biological and geographical basis for switchgrass germplasm diversity and to provide a resource for scientists and outreach personnel to find switchgrass germplasm to meet their needs. Upland and lowland ecotypes represent the most important polymorphism in switchgrass, with distinct but overlapping geographic distributions. Variation in ploidy exists within both ecotypes, with 2n = 4x = 36 the dominant ploidy …

Snorkeling A 323myo Paleozooic Bay Community Structure And Depositional Environment Of The Bear Gulch Limestone Of Montana, Eileen D. Grogan, Richard Lund

Presentations

The Carboniferous Bear Gulch Limestone of Montana preserves the fauna and flora of a shallow, tropical marine bay, providing a rare glimpse into bay ecology and community structure in deep time. We discuss how museum fish collections are vital resources that assist us in resurrecting the fossil fish and how we derived a depositional model that explains the quality of preservation in this lagerstatte and records the diversity of its fishes (chondrichthyan, sarcopterygian and actinopterygians).

Evolutionary And Ecological Characterization Of Mayaro Virus Strains Isolated During An Outbreak, Venezuela, 2010, Albert J. Auguste, Jonathan Liria, Naomi L. Forrester, Dileyvic Giambalvo, Moncada Maria, Kanya C. Long, Dulce Morón, Nuris De Manzione, Robert B. Tesh, Eric S. Halsey, Tadeusz J. Kochel, Rosa Hernandez, Juan-Carlos Navarro, Scott C. Weaver

Faculty Publications

In 2010, an outbreak of febrile illness with arthralgic manifestations was detected at La Estación village, Portuguesa State, Venezuela. The etiologic agent was determined to be Mayaro virus (MAYV), a reemerging South American alphavirus. A total of 77 cases was reported and 19 were confirmed as seropositive. MAYV was isolated from acute-phase serum samples from 6 symptomatic patients. We sequenced 27 complete genomes representing the full spectrum of MAYV genetic diversity, which facilitated detection of a new genotype, designated N. Phylogenetic analysis of genomic sequences indicated that etiologic strains from Venezuela belong to genotype D. Results indicate that MAYV is …

The Contribution Of Syntrophic Fatty-Acid Degrading Microbial Communities To Anaerobic Digester Function And Stability, Prince Peter Mathai

Dissertations (1934 -)

Anaerobic digestion (AD), the conversion of complex organic matter to methane, occurs through a series of reactions mediated by different guilds of microorganisms. AD process imbalances, such as organic overload or high organic loading rates (OLR), can result in the accumulation of volatile fatty acids (VFA) e.g., propionate, which must be degraded to maintain stable reactor function. VFAs are metabolized by syntrophic fatty-acid degrading bacteria (SFAB) in association with methanogenic archaea (collectively, syntrophic microbial communities, SMC). Despite their indispensable role in AD, little is known about the ecology of SFAB, especially under stressed conditions. To facilitate ecological studies, four quantitative …

Forest Diversity And Disturbance: Changing Influences And The Future Of Virginia’S Forests, Christine J. Small, James L. Chamberlain

Virginia Journal of Science

The Virginia landscape supports a remarkable diversity of forests, from maritime dune woodlands, swamp forests, and pine savannas of the Atlantic Coastal Plain, to post-agricultural pine-hardwood forests of the Piedmont, to mixed oak, mesophytic, northern hardwood, and high elevation spruce-fir forests across three mountain provinces in western parts of the state. Virginia’s forests also have been profoundly shaped by disturbance. Chestnut blight, hemlock woolly adelgid, emerald ash borer, and other pests have caused declines or functional extirpation of foundation species. Invasive plants like multiflora rose, Oriental bittersweet, and Japanese stiltgrass threaten both disturbed and intact forests. Oaks and other fire-dependent …

Jane Claire Dirks's Correspondence With Stanley G. Jewett, Jane Claire Dirks-Edmunds, Stanley G. Jewett

Jane Claire Dirks-Edmunds Documents

This exchange between Jane Claire Dirks (later Jane Claire Dirks-Edmunds) and Stanley G. Jewett, a biologist with Region 1 of the Fish and Wildlife Service (serving Oregon and five other states), is an example of the type of correspondence Dirks had with various experts on the Pacific forest region while she was completing her doctoral thesis. Dirks-Edmunds began to study Zoology in Illinois immediately after earning her Bachelor's degree in Biology from Linfield College in 1937. She returned to teach in the Biology department at Linfield from 1941-1974.

Incipient Speciation In Freshwater Fish Species From Two Isolated Watersheds, Paula Gore Miller

Dissertations, Theses, and Capstone Projects

The process of speciation occurs as a result of restricted gene flow between segments of an interbreeding population occupying different geographic areas. This separation may result in isolated populations which undergo genetic and phenotypic changes. The Wisconsin glacial period, which ended approximately 17,500 years ago, dramatically altered the geography of North America. The glacier covered almost the entire North America as it advanced. Areas that were not covered with ice provided suitable habitats (refugia) for relict species that were previously widespread in the northern section of the continent. As the ice sheet retreated, animals and plants were able to return …

Doing It Again: Repeating Methodology From Published Literature To Learn Field Biology, Laurie Eberhardt

Biology Faculty Publications

Repeatability underpins a basic assumption in science which students must learn in order to evaluate others’ research findings as well as to communicate the results of their own research. By attempting to repeat the methods of published studies, students learn the importance of clear written communication, while at the same time developing research skills. I describe three examples of published field studies that can be used as the basis for course exercises on the repeatability of methodology, as well as field sampling techniques, all grounded in the overall topic of environmental change. Two of the exercises returned students to the …

Buteo Nesting Ecology: Evaluating Nesting Of Swainson’S Hawks In The Northern Great Plains, Will M. Inselman, Shubham Datta, Jonathan Jenks, Kent Jensen, Troy Grovenburg

Natural Resource Management Faculty Publications

Swainson’s hawks (Buteo swainsoni) are long-distance migratory raptors that nest primarily in isolated trees located in areas of high grassland density. In recent years, anthropogenic conversion of grassland habitat has raised concerns about the status of the breeding population in the northern Great Plains. In 2013, we initiated a study to investigate the influence of extrinsic factors influencing Swainson’s hawk nesting ecology in north-central South Dakota and south-central North Dakota. Using ground and aerial surveys, we located and monitored nesting Swainson’s hawk pairs: 73 in 2013 and 120 in 2014. We documented 98 successful breeding attempts that fledged …

Community Involvement To Address A Long-Standing Invasive Species Problem: Aspects Of Civic Ecology In Practice, Rebecca W. Dolan, Kelly Harris, Mark Adler

Scholarship and Professional Work - LAS

Invasive non-native species (INS) are found in every city around the globe, but their impacts in urban settings as biological agents of visual pollution that block views of natural landscapes and disconnect citizens from nature are not as often addressed as comprehensively as their impacts in natural areas or agricultural settings. The multiple impacts of INS in cities make them ideal candidates for aspects of Civic Ecology Practice, where local environmental stewardship action is taken to enhance green infrastructure and community well-being in urban and other human-dominated systems. We present details of a community driven program focused on removal of …

Rapid: Ecological Resistance Of Multiply Stressed Populations: The Response Of Tidal Marsh Birds And Plants To Hurricane Sandy, Brian J. Olsen, Chris S. Elphick, Greg Shriver

University of Maine Office of Research Administration: Grant Reports

All animal and plant populations can weather change. However, the amount of environmental change a population can absorb is likely to depend upon other, past and ongoing stresses that the population experiences. This project will test whether the ability of populations of native plants and animals in coastal marshes to withstand the recent, extreme storm Hurricane Sandy was greater or less in marshes more subject to past stresses. Researchers will compare the abundances of marsh plants and animals before and after the storm and test whether vulnerability was greater in more specialized species or in marshes surrounded by development, invaded …

How Diverse Detrital Environments Influence Nutrient Stoichiometry Between Males And Females Of The Co-Occurring Container Mosquitoes Aedes Albopictus, Ae. Aegypti, And Culex Quinquefasciatus, Donald A. Yee, Michael G. Kaufman, Nnaemeka F. Ezeakacha

Faculty Publications

Allocation patterns of carbon and nitrogen in animals are influenced by food quality and quantity, as well as by inherent metabolic and physiological constraints within organisms. Whole body stoichiometry also may vary between the sexes who differ in development rates and reproductive allocation patterns. In aquatic containers, such as tree holes and tires, detrital inputs, which vary in amounts of carbon and nitrogen, form the basis of the mosquito-dominated food web. Differences in development times and mass between male and female mosquitoes may be the result of different reproductive constraints, which could also influence patterns of nutrient allocation. We examined …

Population Dynamics And Ecophysiology Of Fraser Fir (Abies Fraseri) In The High Elevation Forests In The Southern Appalachian Mountains, Steven Douglas Kaylor

Doctoral Dissertations

Dominated by the endemic Fraser fir (Abies fraseri), the high-elevation forests of the Southern Appalachians are one of the most endangered ecosystems in the United States, and the future of these forests remains uncertain. Fraser fir is showing signs of decline in health and increased mortality throughout its range, possibly due to multiple environmental stresses.

Using twenty years of forest monitoring data, this dissertation documents change in forest structure and species composition in high-elevation red spruce-Fraser fir forests in southern Appalachia and generates predictions of future forest change. Additionally, it quantifies physiological measures of carbon fixation, storage and …

Functional Diversity Of Regional Marine Paleocommunities After The Permo-Triassic Mass Extinction: Case Studies From Panthalassa And Paleo-Tethys, Ashley Ann Dineen

Theses and Dissertations

The Permo-Triassic mass extinction (PTME) was the largest biodiversity collapse in Earth’s history. Published data has been interpreted as indicating that marine ecological devastation following the PTME was protracted and may have lasted 5 million years into the Middle Triassic (Anisian). However, a review of previous literature shows that understanding of biotic recovery is usually based on only a few components of the ecosystem, such as on taxonomic diversity, a single genus/phylum, or shallow water facies. Typically, paleocommunities are considered fully recovered when dominance and diversity are regained and normal ecosystem functioning has resumed. However, to more fully characterize Triassic …

Beyond Bivariate Correlations: Three-Block Partial Least Squares Illustrated With Vegetation, Soil, And Topography, Daehyun Kim, Thomas J. Dewitt, César S. B. Costa, John A. Kupfer, Ryan W. Mcewan, J. Anthony Stallins

Biology Faculty Publications

Ecologists, particularly those engaged in biogeomorphic studies, often seek to connect data from three or more domains. Using three-block partial least squares regression, we present a procedure to quantify and define bi-variance and tri-variance of data blocks related to plant communities, their soil parameters, and topography. Bi-variance indicates the total amount of covariation between these three domains taken in pairs, whereas tri-variance refers to the common variance shared by all domains. We characterized relationships among three domains (plant communities, soil properties, topography) for a salt marsh, four coastal dunes, and two temperate forests spanning several regions in the world. We …

Effects Of Different Agricultural Management Systems On Arbuscular Mycorrhizal Fungal Diversity, Community Structure, And Ecosystem Services., Charles Bradford Gottshall

Electronic Theses and Dissertations

Disturbances associated with row-crop agricultural management systems include mechanical (tillage and cultivation) and chemical (fertilizer, pesticides, herbicides, fungicides) inputs and are often co-occurring. Many soil microbes are sensitive to these disturbances, including arbuscular mycorrhizal fungi (AMF), important plant mutualists in agricultural systems. AMF associate with many crop plants and provide direct benefits through root pathogen protection, drought resistance, nutrient acquisition and uptake, as well as contribute to ecosystem services by improving overall soil fertility. Examining how different row-crop management system disturbances affect the AMF community is important for understanding and enhancing benefits provided by these important mutualists, and key to …

Modeling The Ecological Consequences Of Visitor Behavior In Off-Trail Areas Of Dispersed Recreation Use, Ashley L. D'Antonio

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Parks and protected areas are often created to protect important social, ecological, or cultural resources from impairment. In the United States, a large majority of these parks and protected areas are also public land where recreational activities such as hiking or scenic driving are allowed. Managers of many parks and protected areas must therefore try to protect resources while also allowing for recreation use that may put these resources at risk for damage. The field of recreation ecology is interested in understanding how recreation use in parks and protected areas can sometimes cause ecological impacts to vegetation, soil, wildlife, water, …

Exploring How Clean Water Act Enforcement Influences Stream Macroinvertebrate Communities, Shelby Renee Burks Ward

Masters Theses

Enforcement is a key feature of the Clean Water Act. The Clean Water Act’s National Pollutant Discharge Elimination System (NPDES) permit program regulates effluent into streams that may impact aquatic life. Yet, authorities do not always enforce permits when violations occur. My research examines macroinvetebrate survey data near NPDES permitted facilities in Kentucky and Tennessee to determine the influence of enforcement actions on aquatic biodiversity. Pre-existing data from the Environmental Protection Agency and state agencies was used to make quantitative and spatial comparisons.

My first study used multiple regression to explore whether enforcement and freshwater community indicators changed together. North …

A Comprehensive Evaluation Of Benthic Invertebrate Communities In The Emory River, Watts Bar Reservoir, Tn, Suzanne Jane Young

Masters Theses

The release of fly ash at the Tennessee Valley Authority (TVA) Kingston Fossil Plant (KIF) on 22 December 2008 discharged approximately 4.1 million cubic meters of coal ash into the adjacent aquatic and terrestrial systems. Previous benthic invertebrate investigations conducted by TVA and collaborative researchers concluded that benthic invertebrates in the Emory River were at moderate risk from ash-related constituents, primarily arsenic, in ash-contaminated sediment that remained in the Emory River following extensive dredging efforts. These conclusions were based on the observation of statistically significant reductions in growth and biomass in laboratory toxicity tests with Emory River sediment. Benthic invertebrate …

Discovery And Delimitation: Criconematid Nematodes Of North American Grasslands, Magdalena Jean Olson

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Approximately 200 years ago, North American landscapes were dominated by vast expanses of grassland. The Great Plains, an ecologically complex and diverse ecoregion, extended from Canada to the Gulf of Mexico, and from the Rocky Mountains to the border of the eastern hardwood forest in Indiana. Now the original tallgrass prairie exists in small widely dispersed remnant patches surrounded by agroecosystems. This study is an effort to characterize soil nematode diversity and population structure within those remnant patches. The plant parasitic nematode family Criconematidae serves as our indicator for nematode diversity, due to its global distribution, high abundance in natural …

Cryptic Speciation In The Acari: A Function Of Species Lifestyles Or Our Ability To Separate Species?, Anna Skoracka, Sara Magalhães, Brian G. Rector, Lechosław Kuczyński

Harold W. Manter Laboratory: Library Materials

There are approximately 55,000 described Acari species, accounting for almost half of all known Arachnida species, but total estimated Acari diversity is reckoned to be far greater. One important source of currently hidden Acari diversity is cryptic speciation, which poses challenges to taxonomists documenting biodiversity assessment as well as to researchers in medicine and agriculture. In this review, we revisit the subject of biodiversity in the Acari and investigate what is currently known about cryptic species within this group. Based on a thorough literature search, we show that the probability of occurrence of cryptic species is mainly related to the …

Investigating Trophic Interactions Of Deep-Sea Animals (Sharks, Teleosts, And Mobile Scavengers) In The Gulf Of Mexico Using Stable Isotope Analysis, Diana A. Churchill

FIU Electronic Theses and Dissertations

The deep-sea is the largest habitat on earth, containing over 90 percent of the world’s oceans and home to over 20,000 species. Deep-sea ecosystems are increasingly impacted by human activities including fishing and oil extraction. To understand potential impacts on deep-sea food webs, it is crucial to gather baseline data in these systems. I quantified the trophic interactions of three groups of deep-water animals across a range of trophic levels living in the northern and eastern Gulf of Mexico using stable isotope analysis. First, I propose methods for correcting δ¹⁵N values for the presence of nitrogenous metabolic waste …

Bactericera Cockerelli (Sulc) (Hemiptera: Triozidae): Nearly Complete Mitochondrial Genome, Single Mitochondrial Genes And Complete Mitochondrial Genome Comparison, And Insecticide Resistance Genes Of Potato Psyllid Populations From North America, Amalia Rosa Lopez Montiel

Biology Theses

The potato psyllid, Bactericera cockerelli (Sulc.), is an economic pest of potatoes and other solanaceous crops, and the vector of the causal agent of zebra chip disease. The expanded distribution of the potato psyllid has resulted in the differentiation of biotypes (central and western), and haplotypes (southwestern and northwestern), according to analysis of the mitochondrial gene cytochrome oxidase I (COI). In this study, the nearly complete (part of the control region unsequenced) mitochondrial genome from potato psyllid populations occurring in North America: Texas, Nebraska, California, Washington, northwest (Washington) and southwest (Arizona), were sequenced using next generation sequencing technology. The raw …

Serpentine Ecosystem Responses To Varying Water Availability And Prescribed Fire In The U.S. Mid-Atlantic Region, Jessica Schedlbauer

Biology Faculty Publications

No abstract provided.

Comparison Of Biotic Communities Of The Cedar-Hemlock And Oak-Hickory Associations, Draft Version, Jane Claire Dirks-Edmunds

Jane Claire Dirks-Edmunds Documents

This early, typewritten draft of the doctoral dissertation by Jane Claire Dirks (later Jane Claire Dirks-Edmunds) contains her edits and notes. Dirks-Edmunds's project compared the Douglas fir forest community on Saddleback Mountain in Oregon to an oak-hickory forest near her graduate school in Illinois.

Dr. Dirks-Edmunds graduated from Linfield College in 1937; she later returned to teach in the Biology department at Linfield from 1941-1974.

Living On The Edge: Settlement Patterns By The Symbiotic Barnacle Xenobalanus Globicipitis On Small Cetaceans, Juan M. Carillo, Robin M. Overstreet, Juan A. Raga, Francisco J. Aznar

Faculty Publications

The highly specialized coronulid barnacle Xenobalanus globicipitis attaches exclusively on cetaceans worldwide, but little is known about the factors that drive the microhabitat patterns on its hosts. We investigate this issue based on data on occurrence, abundance, distribution, orientation, and size of X. globicipitis collected from 242 striped dolphins (Stenella coeruleoalba) that were stranded along the Mediterranean coast of Spain. Barnacles exclusively infested the fins, particularly along the trailing edge. Occurrence, abundance, and density of X. globicipitis were significantly higher, and barnacles were significantly larger, on the caudal fin than on the flippers and dorsal fin. …

Flowers In Space Attacked By Aliens: Understanding The Spatial Ecology Behind The Devastating Damage By A Thistle Bud Weevil On Pitcher’S Thistle At Whitefish Dunes State Park, Wi, Zechariah D. Meunier

Lawrence University Honors Projects

One of the most threatened plants in the Great Lakes region is Pitcher’s thistle (Cirsium pitcheri), which inhabits sand dunes along the shorelines of Lakes Michigan, Huron, and Superior. In addition to risks from habitat loss and invasive species, C. pitcheri are imperiled by a thistle bud weevil (Larinus planus) that was originally distributed for biological control of nonnative thistles. During the summer of 2014, we empirically studied the devastating damage caused by L. planus on a population of C. pitcheri at Whitefish Dunes State Park, WI, to determine what factors influence the distribution and intensity …