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Pathway Analysis Of Differentially Expressed Genes (Computational), Raymond A. Enke May 2016

Pathway Analysis Of Differentially Expressed Genes (Computational), Raymond A. Enke

Ray Enke Ph.D.

This class tested protocol will guide students through the steps for the following activities:
  • Conduct gene ontology (GO) pathway analysis of statistically and biologically significant differentially expressed genes (DEGs)
  • Sort and organize lists of DEGs in MS Excel spreadsheets based on biological function


Dissection & Rna Isolation From Embryonic Chicken Retina (Wet Lab), Raymond A. Enke May 2016

Dissection & Rna Isolation From Embryonic Chicken Retina (Wet Lab), Raymond A. Enke

Ray Enke Ph.D.

This class tested protocol will guide students through the steps for the following activities:
  • Dissect retina & cornea from developing chicken embryos
  • Extract total cellular RNA from tissues for downstream gene expression analysis


Rna Gel & Spectrophotometer Analysis (Wet Lab), Raymond A. Enke May 2016

Rna Gel & Spectrophotometer Analysis (Wet Lab), Raymond A. Enke

Ray Enke Ph.D.

This class tested protocol will guide students through the steps for the following activities:
  • Determine quantity & purity of total RNA using a spectrophotometer
  • Determine the quality of total RNA using native agarose gel electrophoresis (no formaldehyde required)


Analysis Of Rna-Seq Alignments Using Dna Subway Green Line (Computational), Raymond A. Enke May 2016

Analysis Of Rna-Seq Alignments Using Dna Subway Green Line (Computational), Raymond A. Enke

Ray Enke Ph.D.

This class tested protocol will guide students through the steps for the following activities:
  • Review basic steps of RNA-Seq bioinformatics analysis in DNA Subway Green Line
  • View and run basic analytics of RNA-Seq data set in DNA Subway Green Line


Creating Custom Rna-Seq Data Tracks In The Ucsc Genome Browser (Computational), Raymond A. Enke May 2016

Creating Custom Rna-Seq Data Tracks In The Ucsc Genome Browser (Computational), Raymond A. Enke

Ray Enke Ph.D.

This class tested protocol will guide students through the steps for the following activities:
  • Create your own custom data tracks in the UCSC Genome Browser
  • Visualize RNA-Seq TopHat alignment data as custom tracks in the UCSC Genome Browser
  • Integrate RNA-Seq alignment data with other genome-wide data sets


Stem Gateway Course Redesign Teaching Professional Development: Resources For Teaching And Learning, Gary Smith, Audriana Stark Jan 2016

Stem Gateway Course Redesign Teaching Professional Development: Resources For Teaching And Learning, Gary Smith, Audriana Stark

STEM Gateway

The learning object is a collection of teaching professional development presentations and workbooks for guiding faculty in the re-design of lower-division college science and mathematics courses. The materials were designed and implemented during the University of New Mexico STEM Gateway Project, funded by the U.S. Department of Education Title V program during 2012-2016. The teaching professional development curriculum consisted of a 2.5-day course redesign institute followed by roughly monthly sessions on topics that include teaching diverse students; building learning strategies for students; obtaining student buy-in for active learning; evaluating alignment of learning objectives, activities, and assessment; peer observation of teaching, …


Student Perceptions To Teaching Undergraduate Anatomy In Health Sciences, R Anderton, L Chiu, S Aulfrey Jan 2016

Student Perceptions To Teaching Undergraduate Anatomy In Health Sciences, R Anderton, L Chiu, S Aulfrey

Health Sciences Papers and Journal Articles

Anatomy and physiology teaching has undergone significant changes to keep up with advances in technology and to cater for a wide array of student specific learning approaches. This paper examines perceptions towards a variety of teaching instruments, techniques, and innovations used in the delivery and teaching of anatomy and physiology for health science students, and asks whether active learning through more progressive methods of teaching is beneficial for students across health science disciplines. In total, 138 health science students consisting of 32 biomedical science students, 52 exercise and sports science students, and 54 health and physical education students completed the …


Integrating Movement And Science To Promote Physical Activity And Academic Performance In Middle School Children, Kevin E. Finn, Kyle Mcinnis Jan 2013

Integrating Movement And Science To Promote Physical Activity And Academic Performance In Middle School Children, Kevin E. Finn, Kyle Mcinnis

Health Sciences Faculty Publications

Background: Recommendations from leading U.S. health agencies concerned with reducing childhood obesity call for increased physical activity during school and afterschool environments. Methods: We developed the Active Science curriculum, which is a variety of activity-based lessons (e.g., nature hike, dance class, walk at local park, treadmill at local YMCA) and incorporated them into traditional science classes and after school programs for middle school children in a low-income, ethnically diverse community. Following the activity experiments, students and teachers uploaded data from devices to an interactive website that provided inquiry-based exploratory learning of science content. Results: Physical activity results showed that the …


A Walk Down The Red Carpet: Students As Producers Of Digital Video-Based Knowledge., Barry Ryan Jan 2013

A Walk Down The Red Carpet: Students As Producers Of Digital Video-Based Knowledge., Barry Ryan

Articles

Disengaged and apathetic students are common in many undergraduate classrooms. Learning to these students is a passive process, typified by a consumer-like attitude. One approach to engage students, and enhance the learning experience, is to integrate active learning into the curriculum. The purpose of the pedagogical evaluative study described here was to investigate if student researched, designed and created digital video could act as a viable reusable peer learning resource. Although the use and integration of technology was central to the scope of this project, other ideas such as threshold concepts, the requirement for both active and authentic social constructivist …


Innovative Approach To Active Learning, John G. Graveel, George E. Van Scoyoc Oct 2012

Innovative Approach To Active Learning, John G. Graveel, George E. Van Scoyoc

IMPACT Presentations

Presentation on a course redesign and project plan given at the American Society of Agronomy Annual Meeting, Cincinnati, OH.


Patterns Of Life: Integrating Mathematics With Science, Culture, And Art, Dian Calkins, James B. Cunningham, Foad Satterfield, Mietek Kolipinski, Sibdas Ghosh Oct 2007

Patterns Of Life: Integrating Mathematics With Science, Culture, And Art, Dian Calkins, James B. Cunningham, Foad Satterfield, Mietek Kolipinski, Sibdas Ghosh

Collected Faculty and Staff Scholarship

We offered undergraduate students an interdisciplinary course Patterns of Life that develops mathematical reasoning strategies to solve complex problems. In its most essential form, mathematics is the study of patterns; and mathematical (patterned) reasoning is the ability to think with a plan and a purpose. Students personally experience and use patterns of reasoning in diverse disciplines, and then work in groups to form a valid strategy for solving a selected problem. Patterns of Life is designed as guided, on-site, active-learning experiences, in cooperation with local scientific, cultural and fine arts communities. Course goals for students include: (1) to increase mathematical …


Undergraduate Research Communities: A Powerful Approach To Research Training, Scott Kight Jun 2006

Undergraduate Research Communities: A Powerful Approach To Research Training, Scott Kight

Scott Kight

We applied the concept of learning communities, whereby students develop their own ideas in cohort-based settings, to undergraduate research training. This creates powerful research communities where students practice science from observation to experimental design to interpretation of data. We describe a biology program, but the approach suits many discovery-based disciplines.