Open Access. Powered by Scholars. Published by Universities.®

Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 30 of 120

Full-Text Articles in Physical Sciences and Mathematics

Role Of Group A Streptococcus Htra In The Maturation Of Speb Protease, J. N. Cole, J. A. Aquilina, P. G. Hains, A. Henningham, K. S. Sriprakash, M. G. Caparon, V. Nizet, M. Kotb, S. J. Cordwell, S. P. Djordjevic, Mark J. Walker Dec 2007

Role Of Group A Streptococcus Htra In The Maturation Of Speb Protease, J. N. Cole, J. A. Aquilina, P. G. Hains, A. Henningham, K. S. Sriprakash, M. G. Caparon, V. Nizet, M. Kotb, S. J. Cordwell, S. P. Djordjevic, Mark J. Walker

Faculty of Science - Papers (Archive)

The serine protease HtrA (DegP) of the human pathogen Streptococcus pyogenes (group A Streptococcus; GAS) is localized to the ExPortal secretory microdomain and is reportedly essential for the maturation of cysteine protease SpeB. Here we utilize HSC5 (M5 serotype) and the in-frame isogenic mutant HSC5ΔhtrA to determine whether HtrA contributes to the maturation of other GAS virulence determinants. Mutanolysin cell wall extracts and secreted proteins were arrayed by 2-DE and identified by MALDI-TOF PMF analysis. HSC5ΔhtrA had elevated levels of cell wall-associated M protein, whilst the supernatant had higher concentrations of M protein fragments and a reduced amount of mature …


Changing Cultures Of Water In Eastern Australian Backyard Gardens, Lesley M. Head, Pat Muir Dec 2007

Changing Cultures Of Water In Eastern Australian Backyard Gardens, Lesley M. Head, Pat Muir

Faculty of Science - Papers (Archive)

Research into diverse cultural understandings of water provides important contributions to the pressing global issue of sustainable supply, particularly when combined with analysis of relationships between everyday household practice and larger sociotechnical networks of storage and distribution. Here we analyse semi-structured interviews with 298 people about their 241 backyards in the Australian east coast cities of Sydney and Wollongong, undertaken during the 2002-03 drought. Water emerged as an important issue in both consciousness and practice. In contrast to a number of other environmental issues which stimulate more polarised responses, a commitment to reducing water consumption was shared across the study …


Increased Probiotic Yogurt Or Resistant Starch Intake Does Not Affect Isoflavone Bioavailability In Subjects Consuming A High Soy Diet, Theresa A. Larkin, William E. Price, Lee B. Astheimer Oct 2007

Increased Probiotic Yogurt Or Resistant Starch Intake Does Not Affect Isoflavone Bioavailability In Subjects Consuming A High Soy Diet, Theresa A. Larkin, William E. Price, Lee B. Astheimer

Faculty of Science - Papers (Archive)

Objective: Probiotics and prebiotics that affect gut microflora balance and its associated enzymeactivity may contribute to interindividual variation in isoflavone absorption after soy intake, possiblyenhancing isoflavone bioavailability. This study examined the effects of the consumption ofbioactive yogurt (a probiotic) or resistant starch (a known prebiotic) in combination with high soyintake on soy isoflavone bioavailability.Methods: Using a crossover design, chronic soy consumption was compared with soy plusprobiotic yogurt or resistant starch in older male and postmenopausal females (n 31). Isoflavonebioavailability was assessed at the beginning and end of each 5-wk dietary period by samplingplasma and urine after a standardized soy meal.Results: …


Investigation Of The Gas Phase Reactivity Of The 1-Adamantyl Radical Using A Distonic Radical Anion Approach, D. G. Harman, Stephen J. Blanksby Sep 2007

Investigation Of The Gas Phase Reactivity Of The 1-Adamantyl Radical Using A Distonic Radical Anion Approach, D. G. Harman, Stephen J. Blanksby

Faculty of Science - Papers (Archive)

The gas phase reactions of the bridgehead 3-carboxylato-1-adamantyl radical anion were observed with a series of neutral reagents using a modified electrospray ionisation linear ion trap mass spectrometer. This distonic radical anion was observed to undergo processes suggestive of radical reactivity including radical-radical combination reactions, substitution reactions and addition to carbon-carbon double bonds. The rate constants for reactions of the 3-carboxylato-1-adamantyl radical anion with the following reagents were measured (in units 10 12 cm3 molecule 1 s 1): 18O2 (85±4), NO (38.4±0.4), I2 (50±50), Br2 (8±2), CH3SSCH3 (12±2), styrene (1.20±0.03), CHCl3 (H abstraction 0.41±0.06, Cl abstraction 0.65±0.1), CDCl3 (D abstraction …


Reconnaissance Of Historic (Post-Ad 1000) High-Energy Deposits Along The Atlantic Coasts Of Southwest Britain, Ireland And Brittany, France, S. K. Haslett, Edward A. Bryant Aug 2007

Reconnaissance Of Historic (Post-Ad 1000) High-Energy Deposits Along The Atlantic Coasts Of Southwest Britain, Ireland And Brittany, France, S. K. Haslett, Edward A. Bryant

Faculty of Science - Papers (Archive)

Sand and gravel deposits from the Atlantic coasts of southwest Britain, Brittany and western Ireland are identified as potential indicators of historic (post-AD 1000) ocean-sourced high-energy events, such as storm surges and tsunami. This is an important historic period as it includes the climatic perturbations of the Medieval Warm Period and the Little Ice Age, and also seismogenic events, such as the Lisbon tsunami of 1755. Ten new sites are identified from various coastal settings and dated using eight new radiocarbon dates alongside previously published data. Generally, sites do not appear to record multiple high-energy events, suggesting that either only …


Adaptation To High Temperatures Through Macromolecular Dynamics By Neutron Scattering, M. Tehei, G. Zaccai Aug 2007

Adaptation To High Temperatures Through Macromolecular Dynamics By Neutron Scattering, M. Tehei, G. Zaccai

Faculty of Science - Papers (Archive)

Work on the relationship between hyperthermophile protein dynamics, stability and activity is reviewed. Neutron spectroscopy has been applied to measure and compare the macromolecular dynamics of various hyperthermophilic and mesophilic proteins, under different conditions. First, molecular dynamics have been analyzed for the hyperthermophile malate dehydrogenase from Methanococcus jannaschii and a mesophilic homologue, the lactate dehydrogenase from Oryctolagus cunniculus (rabbit) muscle. The neutron scattering approach has provided independent measurements of the global flexibility and structural resilience of each protein, and it has been demonstrated that macromolecular dynamics represents one of the molecular mechanisms of thermoadaptation. The resilience was found to be …


New Understanding Of The Group A Streptococcus Pathogenesis Cycle, A. H. Tart, Mark J. Walker, J. M. Musser Jul 2007

New Understanding Of The Group A Streptococcus Pathogenesis Cycle, A. H. Tart, Mark J. Walker, J. M. Musser

Faculty of Science - Papers (Archive)

Group A Streptococcus (GAS) has long been recognized as a human pathogen causing an exceptionally broad range of infections. However, despite intense research, the molecular mechanisms of GAS disease remain unclear. Recently, many important discoveries have been made that shed light on GAS pathogenesis and open exciting new avenues for future research. Advances in genome sequencing, microarray technology and proteomic analysis in combination with the development of more suitable animal models have dramatically increased the amount of data regarding the mechanisms of GAS pathogenesis. The information gained from these studies will translate into the identification of improved diagnostics and new …


Elucidation Of Double Bond Position In Unsaturated Lipids By Ozone Electrospray Ionization Mass Spectrometry (Ozesi-Ms), M. C. Thomas, Todd Mitchell, J. M. Deeley, D. G. Harman, R. C. Murphy, Stephen J. Blanksby Jun 2007

Elucidation Of Double Bond Position In Unsaturated Lipids By Ozone Electrospray Ionization Mass Spectrometry (Ozesi-Ms), M. C. Thomas, Todd Mitchell, J. M. Deeley, D. G. Harman, R. C. Murphy, Stephen J. Blanksby

Faculty of Science - Papers (Archive)

The position(s) of carbon-carbon double bonds within lipids can dramatically affect their structure and reactivity and thus has a direct bearing on biological function. Commonly employed mass spectrometric approaches to the characterization of complex lipids however, fail to localize sites of unsaturation within the molecular structure and thus cannot distinguish naturally occurring regioisomers. In a recent communication [Thomas, Mitchell, Blanksby in the Journal of the American Chemical Society, 2006, 128, 58-59] we have presented a new technique for the elucidation of double bond position in glycerophospholipids using ozone-induced fragmentation within the source of a conventional electrospray ionization mass spectrometer. Here …


Superoxide Does React With Peroxides: Direct Observation Of The Haber-Weiss Reaction In The Gas Phase, Stephen J. Blanksby, G. B. Ellison, V. M. Bierbaum, S. Kato May 2007

Superoxide Does React With Peroxides: Direct Observation Of The Haber-Weiss Reaction In The Gas Phase, Stephen J. Blanksby, G. B. Ellison, V. M. Bierbaum, S. Kato

Faculty of Science - Papers (Archive)

Reactions of superoxide with hydrogen peroxide and organic hydroperoxides are observed as efficient processes in the gas phase and yield products – including the ozonide anion – that are consistent with the one-electron reduction of the peroxide.


Catastrophic Wave Erosion, Bristol Channel, United Kingdom: Impact Of Tsunami?, E. A. Bryant, S. Haslett May 2007

Catastrophic Wave Erosion, Bristol Channel, United Kingdom: Impact Of Tsunami?, E. A. Bryant, S. Haslett

Faculty of Science - Papers (Archive)

On January 30, 1607, a massive wave from the ocean surged up Bristol Channel in the United Kingdom, flooding more than 500 km2 of lowland along 570 km of coast. It killed 2000 people and is considered Britain’s worst natural disaster on land. The wave occurred on a fine day and surprised inhabitants. Contemporary descriptions of the event have many of the characteristics of accounts of recent catastrophic tsunamis. Geomorphic evidence for tsunamis in the channel can be found in the form of transported and imbricated boulders, bedrock sculpturing on coastal platforms and ramps, and, at isolated locations, wholesale erosion …


Control Of Hiv Through The Inhibition Of Hiv-1 Integrase: A Medicinal Chemistry Perspective, Christopher Gordon, R. Griffith, Paul A. Keller Mar 2007

Control Of Hiv Through The Inhibition Of Hiv-1 Integrase: A Medicinal Chemistry Perspective, Christopher Gordon, R. Griffith, Paul A. Keller

Faculty of Science - Papers (Archive)

This article reviews the current status of classes of HIV-1 integrase enzyme inhibitors. These classes include peptide-based inhibitors, natural products, polyhydroxylated aromatics, diketo acids, naphthyridines, and sulfonated compounds including sulfonic acids. Discussions of structure activity relationships are presented and include the current overview of the structure-based model, suitable for the further design and development. To date, the advances in the medicinal chemistry of HIV-1 integrase inhibitors have relied mostly on ligand-based designs leading to most displaying similar binding interactions within the active site or at the dimer interface. This paves the way for single enzyme mutations rendering entire compound classes …


The N-Terminal Domain Of Alphab-Crystallin Is Protected From Proteolysis By Bound Substrate, J. A. Aquilina, S. J. Watt Feb 2007

The N-Terminal Domain Of Alphab-Crystallin Is Protected From Proteolysis By Bound Substrate, J. A. Aquilina, S. J. Watt

Faculty of Science - Papers (Archive)

alpha-Crystallin, a major structural protein of the lens can also function as a molecular chaperone by binding to unfolding substrate proteins. We have used a combination of limited proteolysis at low temperature, and mass spectrometry to identify the regions of alpha-crystallin directly involved in binding to the structurally compromised substrate, reduced alpha-lactalbumin. In the presence of trypsin, alpha-crystallin which had been pre-incubated with substrate showed markedly reduced proteolysis at the C-terminus compared with a control, indicating that the bound substrate restricted access of trypsin to R157, the main cleavage site. Chymotrypsin was able to cleave at residues in both the …


Cosmogenic Mega-Tsunami In The Australia Region: Are They Supported By Aboriginal And Maori Legends?, Edward A. Bryant, G. Walsh, D. Abbott Feb 2007

Cosmogenic Mega-Tsunami In The Australia Region: Are They Supported By Aboriginal And Maori Legends?, Edward A. Bryant, G. Walsh, D. Abbott

Faculty of Science - Papers (Archive)

Mega-tsunami have affected much of the coastline of Australia over the past millennium. Such catastrophic waves have left an imprint consisting predominently of bedrock sculpturing of the rocky coastline and deposition of marine sediments to elevations reaching 130 mabove sea level. One of the largest of these events occurred in eastern Australia in the fifteenth century. This event may be related to the Mahuika impact crater found at 48.38 S, 166.48 E on the continental shelf 250 km south of New Zealand. A comet at least 500 m in diameter formed the crater. Maori and Aboriginal legends allude to significant …


The Plasminogen-Binding Group A Streptococcal M Protein-Related Protein Prp Binds Plasminogen Via Arginine And Histidine Residues, Martina L. Sanderson-Smith, M. Dowton, Marie Ranson, Mark J. Walker Feb 2007

The Plasminogen-Binding Group A Streptococcal M Protein-Related Protein Prp Binds Plasminogen Via Arginine And Histidine Residues, Martina L. Sanderson-Smith, M. Dowton, Marie Ranson, Mark J. Walker

Faculty of Science - Papers (Archive)

The migration of the human pathogen Streptococcus pyogenes (group A streptococcus) from localized to deep tissue sites may result in severe invasive disease, and sequestration of the host zymogen plasminogen appears crucial for virulence. Here, we describe a novel plasminogen-binding M protein, the plasminogen-binding group A streptococcal M protein (PAM)-related protein (Prp). Prp is phylogenetically distinct from previously described plasminogen-binding M proteins of group A, C, and G streptococci. While competition experiments indicate that Prp binds plasminogen with a lower affinity than PAM (50% effective concentration = 0.34 µM), Prp nonetheless binds plasminogen with high affinity and at physiologically relevant …


Neutron Scattering Reveals Extremely Slow Cell Water In A Dead Sea Organism, M. Tehei, B. Franzetti, K. Wood, F. Gabel, E. Fabiani, M. Jasnin, M. Zamponi, D. Oesterhelt, G. Zaccai, M. Ginzburg, B. Ginzburg Jan 2007

Neutron Scattering Reveals Extremely Slow Cell Water In A Dead Sea Organism, M. Tehei, B. Franzetti, K. Wood, F. Gabel, E. Fabiani, M. Jasnin, M. Zamponi, D. Oesterhelt, G. Zaccai, M. Ginzburg, B. Ginzburg

Faculty of Science - Papers (Archive)

Intracellular water dynamics in Haloarcula marismortui, an extremely halophilic organism originally isolated from the Dead Sea, was studied by neutron scattering. The water in centrifuged cell pellets was examined by means of two spectrometers, IN6 and IN16, sensitive to motions with time scales of 10 ps and 1 ns, respectively. From IN6 data, a translational diffusion constant of 1.3 10-5 cm2s-1 determined at 285 K. This value is close to that found previously for other cells and close to that for bulk water, as well as that of the water in the 3.5 M NaCl solution bathing the cells. A …


A New Methodology For The Simulation Of Flexible Protein – Ligand Interactions, James A. Garner, John Deadman, David I. Rhodes, Renate Griffith, Paul A. Keller Jan 2007

A New Methodology For The Simulation Of Flexible Protein – Ligand Interactions, James A. Garner, John Deadman, David I. Rhodes, Renate Griffith, Paul A. Keller

Faculty of Science - Papers (Archive)

A methodology has been developed for the simulation of induced fit between a ligand and its target protein. It utilizes constrained molecular dynamics where atoms determined to be immobile from difference distance matrix studies are fixed. Application of this methodology to HIV-1 reverse transcriptase (RT) as the example target protein has demonstrated its robustness. Short simulation times are sufficient to achieve good refinement of docking poses resulting from exchange of structurally dissimilar inhibitors between crystal structures.


Water Quality In The Wingecarribee Shire, Nsw, Glennys A. O'Brien, Mark R. O'Donnell, Adrian C. Hutton Jan 2007

Water Quality In The Wingecarribee Shire, Nsw, Glennys A. O'Brien, Mark R. O'Donnell, Adrian C. Hutton

Faculty of Science - Papers (Archive)

This paper reports on a water quality monitoring program carried out for Wingecarribee Shire Council between March 2002 and July 2004 by University of Wollongong staff and students. Initially 40 sites were sampled on four occasions over three months in a pilot program leading to the selection of sites and parameters for a two year program of monthly monitoring. A range of chemical, physical and biological parameters was measured including nutrients and faecal coliform bacteria on samples collected over the 26 approximately monthly sampling trips. Chlorophyll a, phaeophyton and blue-green algae were also determined over a shorter period. The sampling …


Appraisal Of A One-Dimensional Model, Field Data And Dimensionless Parameters In A Study Of Estuarine Circulation, Errol J. Mclean, J. B. Hinwood Jan 2007

Appraisal Of A One-Dimensional Model, Field Data And Dimensionless Parameters In A Study Of Estuarine Circulation, Errol J. Mclean, J. B. Hinwood

Faculty of Science - Papers (Archive)

Parallel research programs encompassing the hydrodynamics and geochemistry have been undertaken in Oatley Bay, a small urban estuary that is a lower tributary to the Georges River in Southern Sydney Using field data and a simple numerical model, the regimes of flow effecting circulation in Oatley Bay have been determined. The efficiency of flushing and the subsequent fate of conservative pollutants are discussed. The field data comprised bathymetry, tides, drogue tracking and dye tests, the latter enabling the calibration of the model under different environmental conditions. With this model we have performed numerous runs and have characterised temporal and spatial …


The Pyrido[1,2-A]Azepine Stemona Alkaloids, Stephen G. Pyne, Alison T. Ung, Araya Jatisatienr, Pitchaya Mungkornasawakul Jan 2007

The Pyrido[1,2-A]Azepine Stemona Alkaloids, Stephen G. Pyne, Alison T. Ung, Araya Jatisatienr, Pitchaya Mungkornasawakul

Faculty of Science - Papers (Archive)

This paper reviews the isolation, structure elucidation, proposed biosynthesis and biological activities of the small, but increasing, number of pyrido[1,2-a]azepine Stemona alkaloids.


Spatial And Temporal Patterns Of Abundance And Recruitment Of Ghost Shrimp Trypaea Australiensis Across Hierarchical Scales In South-Eastern Australia, Douglas Rotherham, R. J. West Jan 2007

Spatial And Temporal Patterns Of Abundance And Recruitment Of Ghost Shrimp Trypaea Australiensis Across Hierarchical Scales In South-Eastern Australia, Douglas Rotherham, R. J. West

Faculty of Science - Papers (Archive)

Spatial and temporal variation in abundance and recruitment of burrowing ghost shrimp Trypaea australiensis was examined across 3 south-eastern Australian estuaries using a hierarchical sampling design, over a 2 yr period. We tested the hypothesis that abundances of shrimp were different between plots (10s to 100s of metres apart), sites within estuaries (kilometres apart), estuaries (100s of kilometres apart) and through time. More frequent sampling at 1 site also examined temporal variation at scales of months, seasons and years. Another aim was to investigate the reliability of using counts of burrow openings to indirectly measure the relative abundance of T, …


Biodiversity Conservation And Natural Resources Management In Nsw: Complexity, Coordination And Common Sense, Carla J. Mooney, Andrew H. Kelly, Malcolm D. Farrier Jan 2007

Biodiversity Conservation And Natural Resources Management In Nsw: Complexity, Coordination And Common Sense, Carla J. Mooney, Andrew H. Kelly, Malcolm D. Farrier

Faculty of Science - Papers (Archive)

Most environmental lawyers, like ecologists, wish to see broad scale landscape change, better management of land and improved protection of remnant vegetation and threatened species. Incorporating scientific knowledge into effective strategic planning is one step. Implementing strategic planning is another, necessitating the flow of priorities into statutory planning and regulation. The translation of broad landscape scale conservation objectives on to the ground requires not only improved understanding but also active use of the legal system. The law relating to the regulation of land use and vegetation clearing, threatened species conservation and catchment management is complex, inter-dependent and dynamic. While planning …


Detection Of Al(Iii) And Ga(Iii) Complexes With Morin By Electrospray Ionization Mass Spectrometry, John B. Bremner, Larry A. Hick, Jody Morgan, Saowanee Rattanaphani, Vichitr Rattanaphani, C Septhum Jan 2007

Detection Of Al(Iii) And Ga(Iii) Complexes With Morin By Electrospray Ionization Mass Spectrometry, John B. Bremner, Larry A. Hick, Jody Morgan, Saowanee Rattanaphani, Vichitr Rattanaphani, C Septhum

Faculty of Science - Papers (Archive)

The Al(III) and Ga(III) complexes formed by morin (M) in aqueous solution were investigated by means of electrospray ionization mass spectrometry (ESI-MS). In the full scan mass spectra, Al:M showed 1:2 and 2:3 stoichiometric ratios. When (S)-N-acetylserine methyl ester (Ser), as a partial mimic of the serine residue in silk, was added to Al:M and Ga:M complexes in aqueous solution, the mass spectra of Ser:Al:M showed 1:1:1 and 1:1:2 stoichiometric ratios. The patterns of the mass spectra of Ga:M and Ser:Ga:M complexes were similar to those for the corresponding Al(III) complexes. Calculated heats of formation of potential structures of the …


Validation And Data Characteristics Of Methane And Nitrous Oxide Profiles Observed By Mipas And Processed With Version 4.61 Algorithm, S Payan, C Camy-Peyret, H Oelhaf, G Wetzel, G Maucher, Nicholas B. Jones, S Wood, M De Maziere, T Blumenstock, P Duchatelet, D Smale, G Bianchini, G Redaelli, F Mencaraglia, M Pirre, N Huret, C Piccolo, U Cortesi, C Keim, N Glatthor, S Mikuteit, G P. Stiller, C Vigouroux, A Engel, M C. Volk, J Kuttippurath, H Kuellmann, P Raspollini, M Mahieu, V Payne, A Bracher, K Grunow, P Jeseck, Y Te, K Pfeilsticker, A Butz, Justus Notholt, Voltaire A. Velazco Jan 2007

Validation And Data Characteristics Of Methane And Nitrous Oxide Profiles Observed By Mipas And Processed With Version 4.61 Algorithm, S Payan, C Camy-Peyret, H Oelhaf, G Wetzel, G Maucher, Nicholas B. Jones, S Wood, M De Maziere, T Blumenstock, P Duchatelet, D Smale, G Bianchini, G Redaelli, F Mencaraglia, M Pirre, N Huret, C Piccolo, U Cortesi, C Keim, N Glatthor, S Mikuteit, G P. Stiller, C Vigouroux, A Engel, M C. Volk, J Kuttippurath, H Kuellmann, P Raspollini, M Mahieu, V Payne, A Bracher, K Grunow, P Jeseck, Y Te, K Pfeilsticker, A Butz, Justus Notholt, Voltaire A. Velazco

Faculty of Science - Papers (Archive)

The ENVISAT validation programme for the atmospheric instruments MIPAS, SCIAMACHY and GOMOS is based on a number of balloon-bone, aircraft and ground-based correlative measurements. In particular the activities of validation scientists were coordinated by ESA within the ENVISAT Stratospheric Aircraft and Balloon Campaign of ESABC. As part of a series of similar papers on other species [this issue] and in parallel to the contribution of the individual validation teams, the present paper provides a synthesis of comparisons performed between MIPAS CH4 and N2O profiles produced by the current ESA operational software (Instrument Processing Facility version 4.61 or IPF v4.61) and …


Stress-Induced Retrotranslocation Of Clusterin/Apoj Into The Cytosol, P Nizard, Suzanne Tetley, Y Le Drean, T Watrin, P Le Goff, Mark R. Wilson, Denis Michel Jan 2007

Stress-Induced Retrotranslocation Of Clusterin/Apoj Into The Cytosol, P Nizard, Suzanne Tetley, Y Le Drean, T Watrin, P Le Goff, Mark R. Wilson, Denis Michel

Faculty of Science - Papers (Archive)

Clusterin is a usually secreted glycoprotein with chaperone properties. Recently, it has been suggested that clusterin isoforms reside in the nuclear and cytosolic compartments of human cell types, where they can influence various cellular programs including DNA repair, transcription and apoptosis. Several mechanisms have been proposed to explain this atypical location, including alternative transcription initiation and alternative splicing. However none of these have been unequivocally established as occurring in live cells. Here we provide direct experimental evidence that in live intact cells, under certain stress conditions, clusterin can evade the secretion pathway and reach the cytosol. This was demonstrated using …


The Tropical Forest And Fire Emissions Experiment: Trace Gases Emitted By Smoldering Logs And Dung From Deforestation And Pasture Fires In Brazil, Ted J. Christian, Robert J. Yokelson, Joao A. Carvahlo, David W. Griffith, Ernesto C. Alvarado, Jose C. Santos, Turibio Gomes Soares Neto, Carlos A. Gurgel Veras, Wei Min Hao Jan 2007

The Tropical Forest And Fire Emissions Experiment: Trace Gases Emitted By Smoldering Logs And Dung From Deforestation And Pasture Fires In Brazil, Ted J. Christian, Robert J. Yokelson, Joao A. Carvahlo, David W. Griffith, Ernesto C. Alvarado, Jose C. Santos, Turibio Gomes Soares Neto, Carlos A. Gurgel Veras, Wei Min Hao

Faculty of Science - Papers (Archive)

Earlier work showed that Amazonian biomass burning produces both lofted and initially unlofted emissions in large amounts. A mobile, Fourier transform infrared spectrometer (FTIR) measured the unlofted emissions of 17 trace gases from residual smoldering combustion (RSC) of logs as part of the Tropical Forest and Fire Emissions Experiment (TROFFEE) during the 2004 Amazonian dry season. The RSC emissions were highly variable and the few earlier RSC measurements lay near the high end of combustion efficiency observed in this study. Fuel consumption by RSC was ∼5% of total for a planned deforestation fire. Much regional RSC probably occurs in the …


Safety Culture And Hazard Risk Perception Of Australian And New Zealand Maritime Pilots, Rosa M. Darbra, J.F.E. Crawford, C. W. Haley, R. J. Morrison Jan 2007

Safety Culture And Hazard Risk Perception Of Australian And New Zealand Maritime Pilots, Rosa M. Darbra, J.F.E. Crawford, C. W. Haley, R. J. Morrison

Faculty of Science - Papers (Archive)

A survey of the safety culture and hazard risk perception has been carried out involving 77 maritime pilots around Australia and New Zealand, representing more than 20% of the maritime pilots in each country, in proportional geographic districbution.


Copper And Zinc Tolerance Of Two Tropical Microalgae After Copper Acclimation, Hilary L. Johnson, Jenny L. Stauber, Merrin Adams S, Dianne F. Jolley Jan 2007

Copper And Zinc Tolerance Of Two Tropical Microalgae After Copper Acclimation, Hilary L. Johnson, Jenny L. Stauber, Merrin Adams S, Dianne F. Jolley

Faculty of Science - Papers (Archive)

Current toxicity tests with microalgae are often criticized as being overly sensitive to metals because algae are cultured in metal-deficient media. If such bioassays overestimate copper toxicity in surface waters, the relevance of water quality guidelines derived from these tests is questionable. In this study, the effect of acclimation to copper at environmentally relevant concentrations, on the sensitivity of the marine diatom Nitzschia closterium and the freshwater green alga Chlorella sp. to copper and zinc was examined. N. closterium was acclimated in culture medium containing 5 or 25 g Cu L-1 for 200 days, while Chlorella sp. was acclimated in …


Validation Of Mipas Hno3 Operational Data, D Y. Wang, M Hopfner, C E. Blom, W E. Ward, Nicholas B. Jones, G C. Toon, E Mahieu, S Wood, M De Maziere, P Demoulin, T Blumenstock, F Hase, H W. Fischer, D Smale, G Bianchini, G Redaelli, F Mencaraglia, J Urban, D Murtagh, M Pirre, V Catoire, N Huret, H Nakajima, C Piccolo, T Sugita, A Kleinbohl, U Cortesi, C Boone, H Oelhaf, C Keim, G Y. Liu, G Wetzel, S Mikuteit, K A. Walker, P Bernath, C Vigouroux, J Kuttippurath Jan 2007

Validation Of Mipas Hno3 Operational Data, D Y. Wang, M Hopfner, C E. Blom, W E. Ward, Nicholas B. Jones, G C. Toon, E Mahieu, S Wood, M De Maziere, P Demoulin, T Blumenstock, F Hase, H W. Fischer, D Smale, G Bianchini, G Redaelli, F Mencaraglia, J Urban, D Murtagh, M Pirre, V Catoire, N Huret, H Nakajima, C Piccolo, T Sugita, A Kleinbohl, U Cortesi, C Boone, H Oelhaf, C Keim, G Y. Liu, G Wetzel, S Mikuteit, K A. Walker, P Bernath, C Vigouroux, J Kuttippurath

Faculty of Science - Papers (Archive)

Nitric acid (HNO3) is one of the key products that are operationally retrieved by the European Space Agency (ESA) from the emission spectra measured by the Michelson Interferometer for Passive Atmospheric Sounding (MIPAS) onboard ENVISAT. The product version 4.61/4.62 for the observation period between July 2002 and March 2004 is validated by comparisons with a number of independent observations from ground-based stations, aircraft/balloon campaigns, and satellites. Individual HNO3 profiles of the ESA MIPAS level-2 product show good agreement with those of MIPAS-B and MIPAS-STR (the balloon and aircraft version of MIPAS, respectively), and the balloon-borne infrared spectrometers MkIV and SPIRALE, …


Comparisons Between Groundbased Ftir And Mipas N2o And Hno3 Profiles Before And After Assimilation In Bascoe, C Vigouroux, M De Maziere, C Errera, S Chabrillat, E Mahieu, P Duchatelet, S. W. Wood, D Smale, S Mikuteit, T Blumenstock, F Hase, Nicholas B. Jones Jan 2007

Comparisons Between Groundbased Ftir And Mipas N2o And Hno3 Profiles Before And After Assimilation In Bascoe, C Vigouroux, M De Maziere, C Errera, S Chabrillat, E Mahieu, P Duchatelet, S. W. Wood, D Smale, S Mikuteit, T Blumenstock, F Hase, Nicholas B. Jones

Faculty of Science - Papers (Archive)

Within the framework of the Network for Detection of Atmospheric Composition Change (NDACC), regular ground-based Fourier transform infrared (FTIR) measurements of many species are performed at several locations. Inversion schemes provide vertical profile information and characterization of the retrieved products which are therefore relevant for contributing to the validation of MIPAS profiles in the stratosphere and upper troposphere. We have focused on the species HNO3 and N2O at 5 NDACC-sites distributed in both hemispheres, i.e., Jungfraujoch (46.5 degrees N) and Kiruna (68 degrees N) for the northern hemisphere, and Wollongong (34 degrees S), Lauder (45 degrees S) and Arrival Heights …


Geophysical Validation Of Mipas-Envisat Operational Ozone Data, U Cortesi, J C. Lambert, C De Clercq, G. Bianchini, T Blumenstock, A. Bracher, E. Castelli, V. Catoire, K. V. Chance, M. De Maziere, P. Demoulin, S. Godin-Beekmann, N. B. Jones, K. Jucks, C. Keim, T. Kerzenmacher, H. Kuellmann, J. Kuttippurath, M. Iarlori, G. Y. Liu, Y. Liu, I. S. Mcdermid, Y. J. Meijer, F. Mencaraglia, S. Mikuteit, H. Oelhaf, C. Piccolo, M. Pirre, P. Raspollini, F. Ravegnani, W. J. Reburn, G. Redaelli, J. J. Remedios, H. Sembhi, D. Smale, T. Steck, A. Taddei, C. Varotsos, C. Vigouroux, A. Waterfall, G. Wetzel, S. Wood Jan 2007

Geophysical Validation Of Mipas-Envisat Operational Ozone Data, U Cortesi, J C. Lambert, C De Clercq, G. Bianchini, T Blumenstock, A. Bracher, E. Castelli, V. Catoire, K. V. Chance, M. De Maziere, P. Demoulin, S. Godin-Beekmann, N. B. Jones, K. Jucks, C. Keim, T. Kerzenmacher, H. Kuellmann, J. Kuttippurath, M. Iarlori, G. Y. Liu, Y. Liu, I. S. Mcdermid, Y. J. Meijer, F. Mencaraglia, S. Mikuteit, H. Oelhaf, C. Piccolo, M. Pirre, P. Raspollini, F. Ravegnani, W. J. Reburn, G. Redaelli, J. J. Remedios, H. Sembhi, D. Smale, T. Steck, A. Taddei, C. Varotsos, C. Vigouroux, A. Waterfall, G. Wetzel, S. Wood

Faculty of Science - Papers (Archive)

The Michelson Interferometer for Passive Atmospheric Sounding (MIPAS), on-board the European ENVIronmental SATellite (ENVISAT) launched on 1 March 2002, is a middle infrared Fourier Transform spectrometer measuring the atmospheric emission spectrum in limb sounding geometry. The instrument is capable to retrieve the vertical distribution of temperature and trace gases, aiming at the study of climate and atmospheric chemistry and dynamics, and at applications to data assimilation and weather forecasting.