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Articles 1 - 30 of 89
Full-Text Articles in Physical Sciences and Mathematics
Toward The Development Of An Ultra-Fast, Bright Photoelectron Emission Source Using Tip Enhancement, Pei-Hsiang Yen, Erik J. Sanchez
Toward The Development Of An Ultra-Fast, Bright Photoelectron Emission Source Using Tip Enhancement, Pei-Hsiang Yen, Erik J. Sanchez
Student Research Symposium
With the advancement of technology, people are pursuing even higher-resolution analysis results from metrology tools. When results are provided with temporal information, one can add a new dimension to the results. This research involves the development of a new temporal electron source by utilizing tip enhancement, which necessitates the creation of a novel type of emitter that emits electrons on a femtosecond (fs) time scale. Due to the nature of the electron’s mass, under the influence of an electric field they move quickly. To achieve our goal is the design of a resonant nano antenna (or known as a nantenna) …
Houseless Water Insecurity During Covid-19 Pandemic, Alicia N. Gamble
Houseless Water Insecurity During Covid-19 Pandemic, Alicia N. Gamble
Student Research Symposium
Water security is of the utmost importance for the houseless population. However, little is known about how the houseless population has been resilient to water barriers related to the COVID-19 pandemic. The purpose of this study is to understand houseless individuals' perceptions of public versus grassroots water sources, and the barriers and impacts of these sources. In order to understand these perceptions, individuals experiencing houselessness (e.g. living in tents, vehicles, emergency shelters, couch-surfing, or no roof) that utilize water sources in Portland, Oregon will be interviewed while walking in public areas to gain rich qualitative data, along with GPS data …
Simple Arenes As Aryne Synthetic Equivalents Via Sulfonium Salt Intermediates, Riley A. Roberts
Simple Arenes As Aryne Synthetic Equivalents Via Sulfonium Salt Intermediates, Riley A. Roberts
Student Research Symposium
Arynes are ephemeral molecules that are yet to be fully exploited in synthetic strategy because they are often challenging to access. These reactive intermediates participate in a myriad of reactions that conventional chemistry is incapable of, making them extremely useful for the synthesis of important molecules like pharmaceuticals and agrochemicals. While classical approaches for synthesizing arynes employ cheap starting material, extremely harsh reagents are necessary to generate the aryne. In contrast, methods that do not require harsh reaction conditions do require starting material that is exceedingly difficult to synthesize. To access arynes quickly and efficiently, the work described herein aims …
Research Proposal For An Assessment Of The Potential For The Arbuscular Fungi “Rhizophagus Irregularis” To Aid In Corn Uptake And Availability Of Iron, Caitlin Costello
Research Proposal For An Assessment Of The Potential For The Arbuscular Fungi “Rhizophagus Irregularis” To Aid In Corn Uptake And Availability Of Iron, Caitlin Costello
Student Research Symposium
Global iron deficiency is one factor contributing to malnutrition and varied health conditions. This deficiency accounts for 841,000 deaths and approximately 35,057,000 “disability-adjusted life years lost” (Stoltzfus, R. J. 2003). One way to combat this is to maintain or increase the iron uptake of the globe’s major crops. Research has shown that certain types of mycorrhizal fungi can increase the nutrient uptake of plants. To further this research, we will look at the arbuscular fungi Rhizophagus irregularis and its potential relationship with a short harvest corn variety. This type of mycorrhizal fungi improves plant nutrition including the plant’s ability to …
Social Capital And Cross-Boundary Collaboration In Wyoming Wildfire Management Networks, Hannah L. Spencer, Christian Heisler
Social Capital And Cross-Boundary Collaboration In Wyoming Wildfire Management Networks, Hannah L. Spencer, Christian Heisler
Student Research Symposium
Wildfire hotspots often intersect jurisdictional boundaries, so protecting human communities and restoring healthy fire regimes will require collaborative, cross-boundary action from fire managers. However, collaboration between fire management groups can have varied outcomes depending on the actors involved, all with different missions, financial obligations, and cultures. One way to conceptualize the interactions between actors is with the idea of social capital. We will investigate the following research question: how does social capital impact cross-boundary collaboration in wildfire management networks? We will survey wildfire managers in northwestern Wyoming about their collaborative actions using a snowball sampling method. Using Social Network Analysis …
Using Digital Holographic Microscopy To Characterize Vibrio's Chemotaxis, Jacqueline Acres, Eric Valentino
Using Digital Holographic Microscopy To Characterize Vibrio's Chemotaxis, Jacqueline Acres, Eric Valentino
Student Research Symposium
Vibrio alginolyticus is a marine bacterium that displays distinctive chemotactic behavior. Chemotaxis is the ability to move in response to a concentration gradient, either in the direction of nutrients or away from repellants. Vibrio's single, polar flagellum allows it to form a tight cloud in the presence of a chemoattractant. In this work, we experimentally characterize cloud sizes after both normal culture conditions and simulated microgravity using digital holographic microscopy or DHM. DHM allows visualization of volumetric samples by recording x,y,z and t information in holograms. Plane-by-plane reconstruction retrieves the z-plane information which can then by stitched together into hyperstacks …
Comparison Of Heavy Metals In Spinach Grown On The Roof Ground Location At Portland State University, Tyler A. Robin
Comparison Of Heavy Metals In Spinach Grown On The Roof Ground Location At Portland State University, Tyler A. Robin
Student Research Symposium
As a result of urbanization, fresh, healthy food can be expensive and easily contaminated but space for local farming is limited. Roofs can be underutilized in densely populated cities and can offer a space for local fresh farming. The purpose of this study is to continue a previous study done in 2021, to find if growing leafy vegetables on the roof can limit heavy metal exposure from air pollutants. This study compares spinach grown on the roof in 2021, 2019 and spinach bought from stores around the Portland State University campus and the heavy metals found in these greens. The …
Mapping Ecosystem Service Flows Of Estuary Restoration Projects On The Oregon Coast To Identify Impacted Stakeholders, Shersten Finley
Mapping Ecosystem Service Flows Of Estuary Restoration Projects On The Oregon Coast To Identify Impacted Stakeholders, Shersten Finley
Student Research Symposium
Restoration of largely depleted estuarine systems is increasingly recognized as key to solving a variety of problems coastal communities face currently. Many of these issues will become more acute with climate change and sea level rise. Historic losses of estuary area, and recognition of the ecosystem services provided by functioning estuary ecosystems have resulted in current impetus to pursue estuary restoration. By mapping the flows of ecosystem services using three ecosystem service ‘scorecard’ categories pertaining to coastal resource management: recreation, aesthetics, and cultural/historical/spiritual, we gain a better understanding of the populations impacted by the changes in flows of ecosystem service …
Growing Reservoir Networks Using The Genetic Algorithm Deep Hyperneat, Nancy L. Mackenzie
Growing Reservoir Networks Using The Genetic Algorithm Deep Hyperneat, Nancy L. Mackenzie
Student Research Symposium
Typical Artificial Neural Networks (ANNs) have static architectures. The number of nodes and their organization must be chosen and tuned for each task. Choosing these values, or hyperparameters, is a bit of a guessing game, and optimizing must be repeated for each task. If the model is larger than necessary, this leads to more training time and computational cost. The goal of this project is to evolve networks that grow according to the task at hand. By gradually increasing the size and complexity of the network to the extent that the task requires, we will build networks that are more …
Surface Plasmon Characterization In Ag Nanotriangles For Evaluation Of Fano Resonance Conditions, Nabila Islam
Surface Plasmon Characterization In Ag Nanotriangles For Evaluation Of Fano Resonance Conditions, Nabila Islam
Student Research Symposium
Surface plasmon polariton (SPP) is a collective oscillation of electrons and light at the metal -dielectric interface excited by the incident radiation on metal surface through the momentum matching conditions. The properties of SPPs and the resonance conditions are highly dependent on the confining materials and geometry of the confining nanostructure. The sensitivity of the surface plasmon resonance to the property of the confining materials made Surface plasmon resonance (SPR) sensors a central tool for biosensing. However, the frequency resolution of SPR sensors is typically limited by the broad resonance of the SPR mode. The resolution can be enhanced through …
The Power Of The Collective: A Multi Agent-Based Modeling Approach To Nuclear Radiation Localization, Benjamin Totten, Christof Teuscher
The Power Of The Collective: A Multi Agent-Based Modeling Approach To Nuclear Radiation Localization, Benjamin Totten, Christof Teuscher
Student Research Symposium
Gamma radiation is a very high frequency, very dangerous electromagnetic wave that has a chance of being emitted after radioactive decay. Radiation source localization, or locating the previously unknown source of nuclear radiation, in a rapid and efficient manner is critically important, but challenging. We aim to create an architecture for multiple, fully independent agents that cooperate to localize sources faster than existing single-agent architectures, without compromising accuracy. Using Agent-Based Modeling and Deep Reinforcement Learning, agents are enabled to make decisions based on other agents' behaviors while maintaining programmatic autonomy. We hypothesize that radiation sources can be localized faster using …
Stakeholder Perceptions Of Microplastics Management In Oregon, Maya A. Hurst-Mayr
Stakeholder Perceptions Of Microplastics Management In Oregon, Maya A. Hurst-Mayr
Student Research Symposium
There is currently no federal policy in the United States that specifically addresses microplastics (MPs) pollution. However, states are beginning to act on this issue; California’s SB 1422 initiates measurement of MPs in drinking water resources and Senate Bill 1263 requires the state to adopt a strategy to reduce the ecological impact of MPs in marine ecosystems. Other West Coast states like Oregon and Washington are expected to follow California’s example. It is important to know what the actors who are a part of shaping MPs policy in Oregon would see as barriers and opportunities to doing so. We conducted …
Computational Investigation Of The Mechanism Of An Octahedral Ni(Ii) Proton Reduction Catalyst And Importance Of Intramolecular Hydrogen Bonding, Avik Bhattacharjee, Dayalis S.V. Brown, Carolyn N. Virca, Trent E. Ethridge, Oreana Mendez Galue, Uyen T. Pham, Theresa M. Mccormick
Computational Investigation Of The Mechanism Of An Octahedral Ni(Ii) Proton Reduction Catalyst And Importance Of Intramolecular Hydrogen Bonding, Avik Bhattacharjee, Dayalis S.V. Brown, Carolyn N. Virca, Trent E. Ethridge, Oreana Mendez Galue, Uyen T. Pham, Theresa M. Mccormick
Student Research Symposium
Water-splitting to make hydrogen gas is of extreme importance in the field of alternative energy research. Transition-metal complexes are capable of catalyzing the conversion of water to hydrogen at higher pH, with low overpotential. Our research focuses on the importance of intramolecular hydrogen bonding (H-bonding) on the pKa and thermodynamic stability of the catalytic intermediates of a well-known proton-reduction catalyst, nickel (II) tris-pyridinethiolate. Density Functional Theory (DFT) calculations on the parent catalyst and eleven derivatives demonstrate geometric isomer formation after the protonation step of catalysis. These isomers differ in the relative thermodynamic stabilities and pKa values, which can be attributed …
Analysis Of Aftershock Parameters For The Alaskan Subduction Zone Tectonic Region, Gabrielle M. Paris (They/Them), Richard C. Hugo, Andrew J. Michael
Analysis Of Aftershock Parameters For The Alaskan Subduction Zone Tectonic Region, Gabrielle M. Paris (They/Them), Richard C. Hugo, Andrew J. Michael
Student Research Symposium
On 29 July 2021, a magnitude 8.2 earthquake was felt by over 200 people near Perryville, Alaska. The early aftershock forecasts issued by the USGS use default parameters based on expected productivity within a given tectonic region. These forecasts predicted a slower decrease in aftershock activity than what was observed. Even after the USGS adjusted the aftershock forecast parameters, the forecasts did not improve in the long term. Accurate aftershock predictions are important for maintaining public confidence in disaster alert systems. The question I want to explore is: are the generic parameters used in aftershock forecasting accurately describing the observed …
In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson
In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson
Student Research Symposium
In Silico Screening of Natural Compounds as Novel Drug Targets for The Treatment of Multiple MyelomaRousselene Larson1 2, Naveen Duhan1, and Rakesh Kaundal1 2 *1Department of Plants, Soils, and Climate, College of Agriculture and Applied Sciences; 2Bioinformatics Facility, Center for Integrated BioSystems; Utah State University, Logan, UT 84322 USA* corresponding author (e-mail: rkaundal@usu.edu)Telephone: +1 (435) 797-4117Fax: +1 (435) 797-2766Abstract: Multiple Myeloma (MM) is an incurable hematological malignancy cancer characterized by excessive clonal plasma cell proliferation in the bone marrow. In the United States, MM is the second most prevalent type of cancer that affects about 4 in 100,000 Americans. Toxicity …
Possible Mechanisms Behind Impaired Glucose Metabolism In Niacin-Deficient Mice, Sierra Lopez
Possible Mechanisms Behind Impaired Glucose Metabolism In Niacin-Deficient Mice, Sierra Lopez
Student Research Symposium
Niacin, a component of vitamin B3, is necessary for the synthesis of nicotinamide adenine dinucleotide (NAD). NAD is an essential coenzyme in many biologic functions, including a number of metabolic processes that regulate glucose and fat homeostasis. Humans obtain niacin in its dietary form, common in meats, nuts, legumes and some leafy vegetables. While severe niacin deficiency, or pellagra, has been drastically reduced in the United States, some populations remain vulnerable to deficiency, particularly pregnant women, cancer patients, the elderly and alcoholics. Age-related NAD deficiency is emerging as being positively correlated with cognitive decline and impaired dermal repair.. At the …
Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh
Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh
Student Research Symposium
Climatic change is one of the biggest threats to the ecosystem and biodiversity by enhancing environmental stresses. Environmental stresses such as biotic and abiotic stresses affect plant health and reduce crop production. The rhizosphere microbiome of a plant plays a significant role in a plant's defense against various biotic and abiotic stresses. In this study, we are investigating the microbiome diversity of bulk soil, rhizosphere, and endosphere of Ceanothus velutinus, snowbrush. Ceanothus is an evergreen native plant that is usually found in dry areas and thrives well in harsh conditions. The snowbrush samples were collected from different locations 1920m, 1950m, …
Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel
Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel
Student Research Symposium
Nighttime irrigation is a widespread strategy to conserve water, as it reduces wind drift and evaporation loss (WDEL). However, daytime sprinkler irrigation may also conserve water by lowering the temperature and increasing the humidity of crop microclimates, thereby reducing evapotranspiration (ET). Therefore, the objectives of this study include: 1) quantify whether a water savings exists between day and night irrigation with a water balance approach, 2) analyze the microclimate effects by irrigation timing to determine any changes to WDEL and evaporative demand, and 3) assess the quality and yield response of two urban crops. In 2019-21, we established 12 field …
Indoor Vertical Farming Potential Solution To Long-Term Global Food Security Issues, Natalie Rigby
Indoor Vertical Farming Potential Solution To Long-Term Global Food Security Issues, Natalie Rigby
Student Research Symposium
Indoor vertical farming may be a solution for global food security issues, especially those driven by climate change, supply chain disruptions, environmental decline, and urban sprawl. This method of cultivation has numerous benefits and drawbacks dependent on the different options used. This presentation will use resilience frameworks developed by USU's Center for Anticipatory Intelligence to help identify these threats facing global food systems and how they may be mitigated by indoor vertical farms. In the coming years, rapid climate change issues are predicted to play an important role in agriculture around the world. The world currently faces a number of …
Transgenic Expression Of Prunus Persica Salt Overly Sensitive 2 (Ppsos2) In Atsos2 Mutant Imparts Salt Tolerance In Arabidopsis, Vishal Singh
Student Research Symposium
Salinity is one of the major environmental stresses that affect crop growth and productivity. Almond crop has a great potential for Utah as a cash crop and salinity is one of the stresses affecting its growth and yield. Although almond trees are sensitive to salt stress, salinity-tolerant rootstocks can play a significant role in sustaining crop production in semiarid areas. Salinity tolerance has a complex mechanism with many genes acting in different pathways. Understanding the role of potential candidate genes is an important aspect of genomics assisted improvement of stress tolerance. In this study, functional complementation of the Prunus persica …
Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh
Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh
Student Research Symposium
Maize is the largest crop in the world in terms of production. Utah, maize is a potential fodder crop. With increasing climate change, soil salinity is also increasing worldwide. Soil salinity is very detrimental to plants' growth and development and crop production. For a fodder crop, plant biomass is an important trait, and maize biomass is adversely affected by salinity stress, especially at the seedling stage. A Selection of salt-tolerant breeding material is a time-consuming process and its complexity is further increased by significant heterogeneity in soil salinity under field based evaluation. Genomic prediction is an emerging tool that can …
Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh
Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh
Student Research Symposium
Climatic change-induced environmental stresses affect crop production. Drought is such a stress which affect crop production and landscaping adversely. Native plants are great for low water use landscaping and can adapt to the natural environment. USU Center for Water-Efficient Landscaping has released a list of native plants that can be used for this purpose. This study focuses on a native plant Ceanothus velutinus (snowbrush) which is an evergreen plant native to western North America. It thrives well in harsh conditions and can act as ornamental plant in low water use landscaping but is difficult to propagate under landscape conditions. Here, …
Examining Urban Soil Quality And Contamination Along The Wasatch Front, Frank Oliver
Examining Urban Soil Quality And Contamination Along The Wasatch Front, Frank Oliver
Student Research Symposium
Urban soil contamination has become an increasingly prevalent concern within residential developments and the expansion of urban agriculture. The purpose of this study was to establish an urban soil survey along the Wasatch Front to examine the concentrations of common contaminants and general soil quality in urban farms and community gardens during 2020-2021. Areas of concern include 1) heavy metals: lead, arsenic, cadmium, and chromium, 2) organic contaminants- petroleum hydrocarbons, polycyclic aromatic hydrocarbons, and volatile organic carbon, 3) pH, 4) soil salinity, and 5) elevated macronutrient levels. Measured contaminant concentrations will be compared to EPA regional screening levels (RSL) along …
Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan
Student Research Symposium
Abstract: Nitrification is an important microbial two-step transformation in the global nitrogen cycle, as it is the only natural process that produces nitrate within a system. The functional annotation of nitrification-related enzymes has a broad range of applications in metagenomics, agriculture, industrial biotechnology, etc. The time and resources needed for determining the function of enzymes experimentally are restrictively costly. Therefore, an accurate genome-scale computational prediction of the nitrification-related enzymes has become much more important.In this study, we developed an alignment-free computational approach to determine the nitrification-related enzymes from the sequence itself. We propose deepNEC, a novel end-to-end feature selection and …
Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan
Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan
Student Research Symposium
Abstract: With the advent of Next-Generation Sequencing (NGS) technologies, numerous data is being generated every day, however, streamlined analysis remains a big hurdle to efficiently use the technology. A large number of algorithms, statistical methods, and software tools have been developed in recent years to perform the individual analysis steps of various NGS applications. Some NGS applications data analysis procedures are therefore very complex, requiring several program tools to be downloaded for their various processing steps. There is a significant room for the development of scalable computing environments that link the individual software components to automated workflows to efficiently and …
Revegetation Of Native Plant Communities In Great Salt Lake Wetlands: The Effects Of Native Seed Mix Composition And Sowing Density, Laura Beck
Student Research Symposium
One of the threats currently facing Great Salt Lake wetlands is Phragmites australis. Its rapid expansion since 1987 has displaced native vegetation and changed the composition of plant communities. Removal is very costly and takes multiple years of different treatments like herbicide, mowing, and flooding. To ensure Phragmites australis does not return, native seeds will need to be sown. This experiment is to determine the best seed composition and sowing density. In the USU greenhouse, I will sow four different native seed mixes: 100% desirable perennial natives, 75% perennial natives and 25% fast growing natives, 50% perennial natives and 50% …
Translating -Omics Big Data: Comprehensive Understanding Of Host-Pathogen Interactions To Control Bacterial Blight In Alfalfa Using Computational Approaches, Raghav Kataria
Student Research Symposium
Plant infectious diseases are a major threat to the crops, owing to economic losses to the agriculture industry worldwide. Molecular interactions between the host and pathogen play a critical role in understanding the basis of pathogenesis. Majority of the Pseudomonas syringae strains are known to cause frost injury in plants, amongst which, P. syringae pv. syringae ALF3 is asserted to be a causal organism of bacterial stem blight in Medicago sativa (alfalfa). We elucidated the genome-scale host-pathogen interactions (HPIs) between alfalfa and P. syringae using two intense computational approaches: interolog (homology-based) and the domain-based method (based on 3D structure of …
Is Mitigation Of Drought Stress By Zinc Oxide Nanoparticles Driven By A Nano-Specific Mechanism Or Mitigation Of Micronutrient Deficiency?, Justin Deakin
Student Research Symposium
It has been reported that zinc oxide (ZnO) nanoparticles (NPs) can promote drought tolerance in crops when used as soil amendments. However, many of these experiments were conducted in Zn-deficient growth media with no comparison to currently available Zn fertilization methods, making it unclear if the benefits from adding ZnO NPs were caused by a nano-specifc mechanism or simply by the mitigation of a micronutrient deficiency. A review of the literature shows that of 12 published experiments considering the effects of ZnO NPs on plant health, 5 out of 6 studies that did not include a comparison to currently available …
Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller
Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller
Student Research Symposium
As agriculture intensifies, the world faces a dual challenge of increasing food production while reducing impacts of excess reactive nitrogen (N) in the environment. A field study examining different N sources in corn silage under semi-arid conditions was conducted at the Greenville farm in northern Utah (41°45’ N, 1111°48’52 W) since 2012. The experimental design is a randomized complete block design with four blocks and four treatments: control (no nitrogen), low ammonium sulfate (AS 112 kg N/ha), high ammonium sulfate (AS 224 kg N/ha), and steer manure compost (224 kg total N/ha). We examined yield, nitrogen use efficiency (NUE), and …
Teaching Social-Emotional Skills Through Storytelling: Development Of A Mobile App For Children, Sally Devitry
Teaching Social-Emotional Skills Through Storytelling: Development Of A Mobile App For Children, Sally Devitry
Student Research Symposium
Children today are born into a world where technology is deeply integrated into daily life. A study completed in 2016 found that 85% of children ages 5-10 participate in some form of screen time (e.g., television, tablet, or smart phone) daily. More than 75% of these children do so for more than two hours a day on average. The increasing use of technology, specifically tablet and smartphone use, will fundamentally redefine childhood experiences. In a child’s formative years, learning social-emotional skills such as empathy, communication, resilience, etc. is vital. Obviously, human interaction cannot be replaced in teaching these social-emotional skills, …