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Full-Text Articles in Physical Sciences and Mathematics

Characterization Of Ceriporiopsis Subvermispora Bicupin Oxalate Oxidase Expressed In Pichia Pastoris, Patricia Moussatche, Eric Hoffer, Ellen W. Moomaw, Et Al. Jun 2016

Characterization Of Ceriporiopsis Subvermispora Bicupin Oxalate Oxidase Expressed In Pichia Pastoris, Patricia Moussatche, Eric Hoffer, Ellen W. Moomaw, Et Al.

Ellen Moomaw

Oxalate oxidase (E.C. 1.2.3.4) catalyzes the oxygen-dependent oxidation of oxalate to carbon dioxide in a reaction that is coupled with the formation of hydrogen peroxide. Although there is currently no structural information available for oxalate oxidase from Ceriporiopsis subvermispora (CsOxOx), sequence data and homology modeling indicate that it is the first manganese-containing bicupin enzyme identified that catalyzes this reaction. Interestingly, CsOxOx shares greatest sequence homology with bicupin microbial oxalate decarboxylases (OxDC). We show that CsOxOx activity directly correlates with Mn content and other metals do not appear to be able to support catalysis. EPR spectra indicate that the Mn is …


Fungal Oxalate Decarboxylase Activity Contributes To Sclerotinia Sclerotiorum Early Infection By Affecting Both Compound Appressoria Development And Function, Xiaofei Liang, Ellen W. Moomaw, Jeffrey A. Rollins Jun 2016

Fungal Oxalate Decarboxylase Activity Contributes To Sclerotinia Sclerotiorum Early Infection By Affecting Both Compound Appressoria Development And Function, Xiaofei Liang, Ellen W. Moomaw, Jeffrey A. Rollins

Ellen Moomaw

Sclerotinia sclerotiorum pathogenesis requires the accumulation of high levels of oxalic acid (OA). To better understand the factors affecting OA accumulation, two putative oxalate decarboxylase (OxDC) genes (Ss-odc1 and Ss-odc2) were characterized. Ss-odc1 transcripts exhibited significant accumulation in vegetative hyphae, apothecia, early stages of compound appressorium development and during plant colonization. Ss-odc2 transcripts, in contrast, accumulated significantly only during mid to late stages of compound appressorium development. Neither gene was induced by low pH or exogenous OA in vegetative hyphae. A loss-of-function mutant for Ss-odc1 (Δss-odc1) showed wild-type growth, morphogenesis and virulence, and was not characterized further. Δss-odc2 mutants hyperaccumulated …


Characterization Of Ceriporiopsis Subvermispora Bicupin Oxalate Oxidase Expressed In Pichia Pastoris, Patricia Moussatche, Eric Hoffer, Ellen W. Moomaw, Et Al. Jun 2016

Characterization Of Ceriporiopsis Subvermispora Bicupin Oxalate Oxidase Expressed In Pichia Pastoris, Patricia Moussatche, Eric Hoffer, Ellen W. Moomaw, Et Al.

Ellen Moomaw

Oxalate oxidase (E.C. 1.2.3.4) catalyzes the oxygen-dependent oxidation of oxalate to carbon dioxide in a reaction that is coupled with the formation of hydrogen peroxide. Although there is currently no structural information available for oxalate oxidase from Ceriporiopsis subvermispora (CsOxOx), sequence data and homology modeling indicate that it is the first manganese-containing bicupin enzyme identified that catalyzes this reaction. Interestingly, CsOxOx shares greatest sequence homology with bicupin microbial oxalate decarboxylases (OxDC). We show that CsOxOx activity directly correlates with Mn content and other metals do not appear to be able to support catalysis. EPR spectra indicate that the Mn is …


Fungal Oxalate Decarboxylase Activity Contributes To Sclerotinia Sclerotiorum Early Infection By Affecting Both Compound Appressoria Development And Function, Xiaofei Liang, Ellen W. Moomaw, Jeffrey A. Rollins Jun 2016

Fungal Oxalate Decarboxylase Activity Contributes To Sclerotinia Sclerotiorum Early Infection By Affecting Both Compound Appressoria Development And Function, Xiaofei Liang, Ellen W. Moomaw, Jeffrey A. Rollins

Ellen Moomaw

Sclerotinia sclerotiorum pathogenesis requires the accumulation of high levels of oxalic acid (OA). To better understand the factors affecting OA accumulation, two putative oxalate decarboxylase (OxDC) genes (Ss-odc1 and Ss-odc2) were characterized. Ss-odc1 transcripts exhibited significant accumulation in vegetative hyphae, apothecia, early stages of compound appressorium development and during plant colonization. Ss-odc2 transcripts, in contrast, accumulated significantly only during mid to late stages of compound appressorium development. Neither gene was induced by low pH or exogenous OA in vegetative hyphae. A loss-of-function mutant for Ss-odc1 (Δss-odc1) showed wild-type growth, morphogenesis and virulence, and was not characterized further. Δss-odc2 mutants hyperaccumulated …


Density, Abundance, And Habitat Associations Of The Inland Swamp Sparrow (Melospiza Georgiana Georgiana) In Iowa, Tyler Harms, Stephen Dinsmore Mar 2016

Density, Abundance, And Habitat Associations Of The Inland Swamp Sparrow (Melospiza Georgiana Georgiana) In Iowa, Tyler Harms, Stephen Dinsmore

Tyler Harms

Wetlands continue to decline throughout North America and the Prairie Pothole Region, thus emphasizing the importance of understanding population trends and habitat associations of wetland species to ensure effective conservation and habitat management of those species. We estimated density and abundance and evaluated habitat associations of the Inland Swamp Sparrow (Melospiza georgiana georgiana) in Iowa. We conducted standardized distance sampling surveys for Swamp Sparrows and measured habitat characteristics at 307 wetlands in two regions of Iowa in 2009 and 2010. We used Program Distance to model detection probability and estimate region-specific breeding densities of Swamp Sparrows at Iowa …


Influence Of Season And Time Of Day On Marsh Bird Detections, Tyler Harms, Stephen Dinsmore Mar 2016

Influence Of Season And Time Of Day On Marsh Bird Detections, Tyler Harms, Stephen Dinsmore

Tyler Harms

Call-broadcast surveys are frequently used to elicit responses of secretive marsh birds and produce greater detection rates than passive surveys. However, little is known about how detection rates of birds from these surveys differ by season and time of day. We conducted call-broadcast surveys for eight focal species at 56 wetlands throughout Iowa from 15 May–13 June 2010 (early season) and from 15 June–10 July 2010 (late season). Our focal species were Pied-billed Grebe (Podilymbus podiceps), American Bittern (Botaurus lentiginosus), Least Bittern (Ixobrychus exilis), King Rail (Rallus elegans), Virginia Rail (Rallus …


Density And Abundance Of Secretive Marsh Birds In Iowa, Tyler Harms, Stephen Dinsmore Mar 2016

Density And Abundance Of Secretive Marsh Birds In Iowa, Tyler Harms, Stephen Dinsmore

Tyler Harms

A decrease in wetland habitats throughout North America has caused a decline in populations of marsh birds. The objective of this study was to estimate population densities and abundances of secretive marsh birds in Iowa. Call-broadcast surveys were conducted in conjunction with distance sampling for eight species of marsh birds at wetlands in three regions of Iowa during 2009 and 2010. Regions were defined by observed microhabitat characteristics which also corresponded to physiographic regions. Region-specific density estimates were obtained using Program Distance for four species of marsh birds for which sufficient detections existed (Pied-billed Grebe [Podilymbus podiceps], Least …


New Body Mass Estimates For Canis Dirus, The Extinct Pleistocene Dire Wolf, William Anyonge, Christopher Roman Mar 2016

New Body Mass Estimates For Canis Dirus, The Extinct Pleistocene Dire Wolf, William Anyonge, Christopher Roman

Christopher Roman

Quantitative study of the body mass of Canis dirus. Results indicate a mean body mass comparable to the extant gray wolf, suggesting larger individual animals probably exceed the body mass range of extant gray wolves.


Expression Of Acyl Carrier Proteins In Spinach, Katherine Schmid, J. Ohlrogge Feb 2016

Expression Of Acyl Carrier Proteins In Spinach, Katherine Schmid, J. Ohlrogge

Katherine Schmid

Dr. Schmid and Dr. Ohlrogge's contribution to the Proceedings of the 9th International Symposium on Plant Lipids; Wye, England; July 8-13, 1990.


Cyclopropane Fatty Acid Expression In Plants, Katherine Schmid Feb 2016

Cyclopropane Fatty Acid Expression In Plants, Katherine Schmid

Katherine Schmid

Pants [sic] are transformed with a bacterial cyclopropane fatty acid synthase gene to produce lipids containing cyclopropane fatty acids. Using this technology dihydrosterculate is produced in oilseed crops such as rape.


The Ssdna Mutator Apobec3a Is Regulated By Cooperative Dimerization, Markus-Frederik Bohn, Shivender Shandilya, Tania Silvas, Ellen Nalivaika, Takahide Kouno, Brian Kelch, Sean Ryder, Nese Yilmaz, Mohan Somasundaran, Celia Schiffer Jan 2016

The Ssdna Mutator Apobec3a Is Regulated By Cooperative Dimerization, Markus-Frederik Bohn, Shivender Shandilya, Tania Silvas, Ellen Nalivaika, Takahide Kouno, Brian Kelch, Sean Ryder, Nese Yilmaz, Mohan Somasundaran, Celia Schiffer

Celia A. Schiffer

Deaminase activity mediated by the human APOBEC3 family of proteins contributes to genomic instability and cancer. APOBEC3A is by far the most active in this family and can cause rapid cell death when overexpressed, but in general how the activity of APOBEC3s is regulated on a molecular level is unclear. In this study, the biochemical and structural basis of APOBEC3A substrate binding and specificity is elucidated. We find that specific binding of single-stranded DNA is regulated by the cooperative dimerization of APOBEC3A. The crystal structure elucidates this homodimer as a symmetric domain swap of the N-terminal residues. This dimer interface …


Structure Of The Vif-Binding Domain Of The Antiviral Enzyme Apobec3g, Takahide Kouno, Elizabeth Luengas, Megumi Shigematsu, Shivender Shandilya, Jingying Zhang, Luan Chen, Mayuko Hara, Celia Schiffer, Reuben Harris, Hiroshi Matsuo Jan 2016

Structure Of The Vif-Binding Domain Of The Antiviral Enzyme Apobec3g, Takahide Kouno, Elizabeth Luengas, Megumi Shigematsu, Shivender Shandilya, Jingying Zhang, Luan Chen, Mayuko Hara, Celia Schiffer, Reuben Harris, Hiroshi Matsuo

Celia A. Schiffer

The human APOBEC3G (A3G) DNA cytosine deaminase restricts and hypermutates DNA-based parasites including HIV-1. The viral infectivity factor (Vif) prevents restriction by triggering A3G degradation. Although the structure of the A3G catalytic domain is known, the structure of the N-terminal Vif-binding domain has proven more elusive. Here, we used evolution- and structure-guided mutagenesis to solubilize the Vif-binding domain of A3G, thus permitting structural determination by NMR spectroscopy. A smaller zinc-coordinating pocket and altered helical packing distinguish the structure from previous catalytic-domain structures and help to explain the reported inactivity of this domain. This soluble A3G N-terminal domain is bound by …


Simultaneously Targeting The Ns3 Protease And Helicase Activities For More Effective Hepatitis C Virus Therapy, Jean Ndjomou, M Corby, Noreena Sweeney, Alicia Hanson, Cihan Aydin, Akbar Ali, Celia Schiffer, Kelin Li, Kevin Frankowski, Frank Schoenen, David Frick Jan 2016

Simultaneously Targeting The Ns3 Protease And Helicase Activities For More Effective Hepatitis C Virus Therapy, Jean Ndjomou, M Corby, Noreena Sweeney, Alicia Hanson, Cihan Aydin, Akbar Ali, Celia Schiffer, Kelin Li, Kevin Frankowski, Frank Schoenen, David Frick

Celia A. Schiffer

This study examines the specificity and mechanism of action of a recently reported hepatitis C virus (HCV) nonstructural protein 3 (NS3) helicase-protease inhibitor (HPI), and the interaction of HPI with the NS3 protease inhibitors telaprevir, boceprevir, danoprevir, and grazoprevir. HPI most effectively reduced cellular levels of subgenomic genotype 4a replicons, followed by genotypes 3a and 1b replicons. HPI had no effect on HCV genotype 2a or dengue virus replicon levels. Resistance evolved more slowly to HPI than telaprevir, and HPI inhibited telaprevir-resistant replicons. Molecular modeling and analysis of the ability of HPI to inhibit peptide hydrolysis catalyzed by a variety …


Structural Basis For Mutation-Induced Destabilization Of Profilin 1 In Als, Sivakumar Boopathy, Tania Silvas, Maeve Tischbein, Silvia Jansen, Shivender Shandilya, Jill Zitzewitz, John Landers, Bruce Goode, Celia Schiffer, Daryl Bosco Jan 2016

Structural Basis For Mutation-Induced Destabilization Of Profilin 1 In Als, Sivakumar Boopathy, Tania Silvas, Maeve Tischbein, Silvia Jansen, Shivender Shandilya, Jill Zitzewitz, John Landers, Bruce Goode, Celia Schiffer, Daryl Bosco

Celia A. Schiffer

Mutations in profilin 1 (PFN1) are associated with amyotrophic lateral sclerosis (ALS); however, the pathological mechanism of PFN1 in this fatal disease is unknown. We demonstrate that ALS-linked mutations severely destabilize the native conformation of PFN1 in vitro and cause accelerated turnover of the PFN1 protein in cells. This mutation-induced destabilization can account for the high propensity of ALS-linked variants to aggregate and also provides rationale for their reported loss-of-function phenotypes in cell-based assays. The source of this destabilization is illuminated by the X-ray crystal structures of several PFN1 proteins, revealing an expanded cavity near the protein core of the …


Inhibition Of Apobec3g Activity Impedes Double-Stranded Dna Repair, Ponnandy Prabhu, Shivender Shandilya, Elena Britan-Rosich, Adi Nagler, Celia Schiffer, Moshe Kotler Jan 2016

Inhibition Of Apobec3g Activity Impedes Double-Stranded Dna Repair, Ponnandy Prabhu, Shivender Shandilya, Elena Britan-Rosich, Adi Nagler, Celia Schiffer, Moshe Kotler

Celia A. Schiffer

The cellular cytidine deaminase APOBEC3G (A3G) was first described as an anti-HIV-1 restriction factor, acting by directly deaminating reverse transcripts of the viral genome. HIV-1 Vif neutralizes the activity of A3G, primarily by mediating degradation of A3G to establish effective infection in host target cells. Lymphoma cells, which express high amounts of A3G, can restrict Vif-deficient HIV-1. Interestingly, these cells are more stable in the face of treatments that result in double-stranded DNA damage, such as ionizing radiation and chemotherapies. Previously, we showed that the Vif-derived peptide (Vif25-39) efficiently inhibits A3G deamination, and increases the sensitivity of lymphoma cells to …


Rediii: A Pipeline For Automated Structure Solution, Markus-Frederik Bohn, Celia Schiffer Jan 2016

Rediii: A Pipeline For Automated Structure Solution, Markus-Frederik Bohn, Celia Schiffer

Celia A. Schiffer

High-throughput crystallographic approaches require integrated software solutions to minimize the need for manual effort. REdiii is a system that allows fully automated crystallographic structure solution by integrating existing crystallographic software into an adaptive and partly autonomous workflow engine. The program can be initiated after collecting the first frame of diffraction data and is able to perform processing, molecular-replacement phasing, chain tracing, ligand fitting and refinement without further user intervention. Preset values for each software component allow efficient progress with high-quality data and known parameters. The adaptive workflow engine can determine whether some parameters require modifications and choose alternative software strategies …


Modulation Of Hiv Protease Flexibility By The T80n Mutation, Hao Zhou, Shangyang Li, John Badger, Ellen Nalivaika, Yufeng Cai, Jennifer Foulkes-Murzycki, Celia Schiffer, Lee Makowski Jan 2016

Modulation Of Hiv Protease Flexibility By The T80n Mutation, Hao Zhou, Shangyang Li, John Badger, Ellen Nalivaika, Yufeng Cai, Jennifer Foulkes-Murzycki, Celia Schiffer, Lee Makowski

Celia A. Schiffer

The flexibility of HIV protease (HIVp) plays a critical role in enabling enzymatic activity and is required for substrate access to the active site. While the importance of flexibility in the flaps that cover the active site is well known, flexibility in other parts of the enzyme is also critical for function. One key region is a loop containing Thr 80, which forms the walls of the active site. Although not situated within the active site, amino acid Thr80 is absolutely conserved. The mutation T80N preserves the structure of the enzyme but catalytic activity is completely lost. To investigate the …


A Direct Interaction With Rna Dramatically Enhances The Catalytic Activity Of The Hiv-1 Protease In Vitro, Marc Potempa, Ellen Nalivaika, Debra Ragland, Sook-Kyung Lee, Celia Schiffer, Ronald Swanstrom Jan 2016

A Direct Interaction With Rna Dramatically Enhances The Catalytic Activity Of The Hiv-1 Protease In Vitro, Marc Potempa, Ellen Nalivaika, Debra Ragland, Sook-Kyung Lee, Celia Schiffer, Ronald Swanstrom

Celia A. Schiffer

Though the steps of human immunodeficiency virus type 1 (HIV-1) virion maturation are well documented, the mechanisms regulating the proteolysis of the Gag and Gag-Pro-Pol polyproteins by the HIV-1 protease (PR) remain obscure. One proposed mechanism argues that the maturation intermediate p15NC must interact with RNA for efficient cleavage by the PR. We investigated this phenomenon and found that processing of multiple substrates by the HIV-1 PR was enhanced in the presence of RNA. The acceleration of proteolysis occurred independently from the substrate's ability to interact with nucleic acid, indicating that a direct interaction between substrate and RNA is not …


A Balance Between Inhibitor Binding And Substrate Processing Confers Influenza Drug Resistance, Li Jiang, Ping Liu, Claudia Bank, Nicholas Renzette, Kristina Prachanronarong, L. Yilmaz, Daniel Caffrey, Konstantin Zeldovich, Celia Schiffer, Timothy Kowalik, Jeffrey Jensen, Robert Finberg, Jennifer Wang, Daniel Bolon Jan 2016

A Balance Between Inhibitor Binding And Substrate Processing Confers Influenza Drug Resistance, Li Jiang, Ping Liu, Claudia Bank, Nicholas Renzette, Kristina Prachanronarong, L. Yilmaz, Daniel Caffrey, Konstantin Zeldovich, Celia Schiffer, Timothy Kowalik, Jeffrey Jensen, Robert Finberg, Jennifer Wang, Daniel Bolon

Celia A. Schiffer

The therapeutic benefits of the neuraminidase (NA) inhibitor oseltamivir are dampened by the emergence of drug resistance mutations in influenza A virus (IAV). To investigate the mechanistic features that underlie resistance, we developed an approach to quantify the effects of all possible single-nucleotide substitutions introduced into important regions of NA. We determined the experimental fitness effects of 450 nucleotide mutations encoding positions both surrounding the active site and at more distant sites in an N1 strain of IAV in the presence and absence of oseltamivir. NA mutations previously known to confer oseltamivir resistance in N1 strains, including H275Y and N295S, …


Structural And Thermodynamic Effects Of Macrocyclization In Hcv Ns3/4a Inhibitor Mk-5172, Djade Soumana, Nese Yilmaz, Kristina Prachanronarong, Cihan Aydin, Akbar Ali, Celia Schiffer Jan 2016

Structural And Thermodynamic Effects Of Macrocyclization In Hcv Ns3/4a Inhibitor Mk-5172, Djade Soumana, Nese Yilmaz, Kristina Prachanronarong, Cihan Aydin, Akbar Ali, Celia Schiffer

Celia A. Schiffer

Recent advances in direct-acting antivirals against Hepatitis C Virus (HCV) have led to the development of potent inhibitors, including MK-5172, that target the viral NS3/4A protease with relatively low susceptibility to resistance. MK-5172 has a P2-P4 macrocycle and a unique binding mode among current protease inhibitors where the P2 quinoxaline packs against the catalytic residues H57 and D81. However, the effect of macrocyclization on this binding mode is not clear, as is the relation between macrocyclization, thermodynamic stabilization, and susceptibility to the resistance mutation A156T. We have determined high-resolution crystal structures of linear and P1-P3 macrocyclic analogs of MK-5172 bound …


Holocene Climatic Change And Past Irish Societal Response, David Brown, M. Baillie, J. Palmer, Christian Turney Dec 2015

Holocene Climatic Change And Past Irish Societal Response, David Brown, M. Baillie, J. Palmer, Christian Turney

David C. Brown

No abstract provided.


Wildlife Of The Gold Coast Wetlands, Shelley Burgin, Daryl Mcphee Aug 2015

Wildlife Of The Gold Coast Wetlands, Shelley Burgin, Daryl Mcphee

Daryl McPhee

Extract: Water in the landscape of the Gold Coast is dominated by marine and marine-influenced systems. The most obvious are the in-shore waters abutting the Gold Coast's world-famous beaches and estuaries. Little more than a glance at a map of the city also reveals the extensive canal estates built to take advantage of the marine waters, and indeed expand them. The waters of the rivers mix with the ocean's waters in the estuaries. These ecosystems are valuable nursery areas for marine wildlife, particularly, but not restricted to, fishes of commercial and recreational value.


Marine Environments Of The Gold Coast: Out With The Old, In With The New, Daryl Mcphee Aug 2015

Marine Environments Of The Gold Coast: Out With The Old, In With The New, Daryl Mcphee

Daryl McPhee

Extract: The marine environments of the Gold Coast comprise one of the most highly modified and heavily utilised waterways in Australia. Chapters 2 and 3 discussed changes in the historic land use patterns. Just what has this meant to the marine environments of the Gold Coast? In this chapter the contemporary marine h abitats of the Gold Coast are described, along with the fauna that those habitats support. We talk about how the current status of the habitats compares with various historical points in time, and the role of novel habitats. Given the impor tance of recreational fishing to both …


In Conclusion, Something To Chew On: Native Plant Foods Of The Gold Coast, Simon Grigalius, Daryl Mcphee Aug 2015

In Conclusion, Something To Chew On: Native Plant Foods Of The Gold Coast, Simon Grigalius, Daryl Mcphee

Daryl McPhee

Extract: Ask most people what Gold Coast food is and you may hear answers like the ubiquitous prawn cocktail with avocado, a burger with ' fresh' pineapple available at the local surf club, or fish and chips (eaten on the beach to give it the seaside connection), with the fish often imported from New Zealand or Vietnam. None of this is the true food of the Gold Coast.


A Brief History Of Discovery, Settlement And Development, Tor Hundloe, Craig Page Aug 2015

A Brief History Of Discovery, Settlement And Development, Tor Hundloe, Craig Page

Tor Hundloe

Extract: If we can rely on anecdotal data, the answers to what is truly Australian will start with mention of the koala, go to kangaroos and then include the rest of Australia's peculiar (to foreigners) fauna. The only exception might be that if we asked a male from the Asian subcontinent (India, Pakistan, Sri Lanka and Bangladesh) what he identified Australia with, he might answer 'Cricket'. Putting that aside, the Gold Coast is very likely to be in the mix of Australian icons. To capture the essence of the Gold Coast, we need to talk about its history in more …


The Impact On The Gold Coast's Terrestrial Environments, Tor Hundloe Aug 2015

The Impact On The Gold Coast's Terrestrial Environments, Tor Hundloe

Tor Hundloe

Extract: We tend to think of the Gold Coast as a water environment. As tourists know, it sits on the shore of the vast Pacific Ocean. That is why most come. They have seen the magnificent photographs. If not perched on flattened dunes looking east to the ocean, a significant part of the urban Gold Coast environment is located around natural and human-made water environments. Of these we will say little here, other than to note their extent. The focus of this chapter is the city's terrestrial environments, reporting on and ultimately, after describing the environments, discussing what proportion of …


State Of The Environment, Tor Hundloe Aug 2015

State Of The Environment, Tor Hundloe

Tor Hundloe

Extract: What have we done? What have we learned? In this chapter we turn our attention to the people of the Gold Coast and their environmental impacts, as experienced in the 21st century. The past is gone. The damage is done. Dramatic change in landforms and ecological relationships are inevitable in building cities. From this we can only learn and do things better in the future. This is why there will never be another Gold Coast like the one we describe in this book.


The Evolution Of Environmental Management As A Profession In Australia And New Zealand, E. Anderson, W. Haylock, Tor Hundloe, S. Molesworth, M. Morris, J. Roper-Lindsay, P. Skelton, J. Womersley Aug 2015

The Evolution Of Environmental Management As A Profession In Australia And New Zealand, E. Anderson, W. Haylock, Tor Hundloe, S. Molesworth, M. Morris, J. Roper-Lindsay, P. Skelton, J. Womersley

Tor Hundloe

Environmental management is a relatively new profession, having evolved since the rapid worldwide rise in environmental consciousness in the 1960s. This article, by past presidents of the Environment Institute of Australia and New Zealand, the inaugural editor of the Australasian Journal of Environmental Management, and collaborators, reflects on the establishment and development of environmental management as a profession, and the parallel development of the Institute as the focus for the profession. It concludes by considering future directions for the profession and Institute.


Petascale Hydrologic Modeling - Needs And Challenges, Fred Ogden Jun 2015

Petascale Hydrologic Modeling - Needs And Challenges, Fred Ogden

Fred L. Ogden

In recent decades, computational schemes have been developed to model point-scale processes using physics-based or conceptual approaches. The integration of these processes across space-time has been limited by computational power to either high-resolution over small spatial domains, or coarse resolution over large spatial domains. These modeling approaches have lead to improved understanding at both small and large scales, but have required parameterization of important phenomenon, and the corresponding lack of model sensitivity to changes and uncertainties in parameter values. The CI-WATER project aims to develop a peta-scale modeling approach to simultaneously allow simulation of high-resolution processes such as snow melt, …


Data In The Sciences At Colby College, A Case Study, Susan Westerberg Cole Apr 2015

Data In The Sciences At Colby College, A Case Study, Susan Westerberg Cole

Susan Westerberg Cole

A sabbatical project looked at the research data needs of science faculty at a small liberal arts college in order to determine potential library support services. I concluded that support needs to come from multiple campus units. This study highlighted the value of personal interviews to discover actual needs that had been unanticipated.