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Articles 1 - 30 of 809

Full-Text Articles in Physical Sciences and Mathematics

Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, Kayla Gonzalez-Boy Nov 2023

Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, Kayla Gonzalez-Boy

Symposium of Student Scholars

Jobos Bay Estuary is an intertidal, tropical estuary located in southern Puerto Rico. The estuary covers about 12 km2 and has a variety of habitats, such as seagrass beds, mangroves, mud flats, and coral reefs, which play important roles in sediment trapping and water quality maintenance. Seagrasses also serve as nursery and feeding grounds and provide shelter for macrofauna. Currently, the role of seagrasses and water quality on nitrogen (N) cycling in trophic estuaries is not well constrained. Understanding variations in sediment-based effects on N cycling rates and transformations, and how they are associated with water quality, is an …

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Reducing Uncertainty In Sea-Level Rise Prediction: A Spatial-Variability-Aware Approach, Subhankar Ghosh, Shuai An, Arun Sharma, Jayant Gupta, Shashi Shekhar, Aneesh Subramanian Oct 2023

Reducing Uncertainty In Sea-Level Rise Prediction: A Spatial-Variability-Aware Approach, Subhankar Ghosh, Shuai An, Arun Sharma, Jayant Gupta, Shashi Shekhar, Aneesh Subramanian

I-GUIDE Forum

Given multi-model ensemble climate projections, the goal is to accurately and reliably predict future sea-level rise while lowering the uncertainty. This problem is important because sea-level rise affects millions of people in coastal communities and beyond due to climate change's impacts on polar ice sheets and the ocean. This problem is challenging due to spatial variability and unknowns such as possible tipping points (e.g., collapse of Greenland or West Antarctic ice-shelf), climate feedback loops (e.g., clouds, permafrost thawing), future policy decisions, and human actions. Most existing climate modeling approaches use the same set of weights globally, during either regression or …

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Estimating Blue Carbon Stocks In Native And Non-Native Seagrass Beds Of Jobos Bay, Pr, Michael Chapman, Raven Winant, Kayla Gonzalez-Boy, Mark Mccarthy, Ángel Dieppa-Ayala Apr 2023

Estimating Blue Carbon Stocks In Native And Non-Native Seagrass Beds Of Jobos Bay, Pr, Michael Chapman, Raven Winant, Kayla Gonzalez-Boy, Mark Mccarthy, Ángel Dieppa-Ayala

Symposium of Student Scholars

Seagrasses are keystone species that support coastal biodiversity, but not all species of seagrasses provide the same ecosystem services. Although seagrasses occupy a small area of marine habitat, they provide many ecosystem services. They stabilize sediments, remove nutrients, provide habitat and food for diverse marine life, and promote carbon storage in sediments. Jobos Bay is the second largest estuary in Puerto Rico and contains salt marshes, mangroves, and seagrass beds. The native seagrass, Thalassia testudinum, is the most abundant seagrass in the bay; however, a seagrass species from the Indian Ocean, Halophila stipulacea, began invading in recent years. The impacts …

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Review Of Nighttime Temperature Effects On Long-Term Health Condition Through Sleep Studies, Sydnie Matkins Apr 2023

Review Of Nighttime Temperature Effects On Long-Term Health Condition Through Sleep Studies, Sydnie Matkins

Modeling, Simulation and Visualization Student Capstone Conference

Over the past 40 years, there has been increasing interest in human sleep quality and duration. This nonsystematic review looked at over 80 peer-reviewed papers on the association among sleep, temperature, and long-term health conditions. Generally, warmer temperatures lend to poorer sleep quality, and poor sleep quality lend to mental illness and a higher risk of coronary heart disease and mortality. Future research should be to conduct a study that relies more on health records rather than questionnaires to accurately map current and future health quality.

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The Linkage Between The Climate Change And The Cybercrimes, Min Kim Apr 2023

The Linkage Between The Climate Change And The Cybercrimes, Min Kim

Cybersecurity Undergraduate Research Showcase

At the beginning of the new era, the rise of the Fourth Industrial Revolution has been rapidly transforming society into a new form that has never been experienced before. While previous industrial revolutions have also contributed to societal growth through phenomenal inventions and discoveries, the Fourth Industrial Revolution has the potential to break the most conventional rule, and one that has dominated social and economic activities: physical interaction. In the near future, sitting at the office, having an in-person meeting, or going on a business trip may no longer be needed as physical barriers are destroyed by cyberspace. However, two …

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The Importance Of Processing And Understanding Bacteriophages, Alexandra Greco, Emily Bishop, Emma Hofseth, Kelsi Phelps Apr 2023

The Importance Of Processing And Understanding Bacteriophages, Alexandra Greco, Emily Bishop, Emma Hofseth, Kelsi Phelps

Undergraduate Research Competition

There are many bacteria that are increasingly becoming antibiotic resistant resulting in a new prevalent medical issue. Bacteriophages are evolutionary virus weapons that infect and fight against these infectious bacteria that give rise to Bacteriophages the most abundant biological entity found in nature, outnumbering all life combined, with a total estimated population of 1031. As part of BIOL 302L - Phage Discovery, we focused on identifying phages from individually collected soil samples found regionally in South Carolina. Through a series of experiments, we were able to identify and amplify two newly discovered phages that infect Mycobacterium Smegmatis following the protocols …

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Telling Their Story: Identifying Stranded Bottlenose Dolphins Using Dorsal Fin Photo-Identification To Match Known Individuals, Grace Richa Apr 2023

Telling Their Story: Identifying Stranded Bottlenose Dolphins Using Dorsal Fin Photo-Identification To Match Known Individuals, Grace Richa

Undergraduate Research Competition

Bottlenose dolphins are protected and managed under the Marine Mammal Protection Act. When dolphins die (strand), researchers investigate the cause of death, but additional information regarding past experience and distribution can help to identify long-term exposure to pathogens and threats. The objective of this study is to use dorsal fin photo-identification to identify stranded bottlenose dolphins by matching them to known individuals from historical CCU research survey data. Photos from vessel-based surveys in Cape Romain, Murrells Inlet, Winyah Bay, and North Inlet, SC were sorted, cropped, and compared to existing fins in the CCU catalog using finFindR, a photo processing …

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Identifying Overwash Layers In Marsh Sediment, Charles Mina Apr 2023

Identifying Overwash Layers In Marsh Sediment, Charles Mina

Undergraduate Research Competition

Hurricanes have become one of the most researched topics in recent years, due to their damage costs and their uncertain correlations with climate change. Much of the research for this topic has come from direct interaction with storms, such as damage reports and land surveys. However, there is a gap in the historical record of hurricanes, as most historical record is only written. These records can be biased and are too short of a record to identify a pattern of climate change. Grain size analysis, where sizes of sediment grains are measured, can be used to identify the storm events …

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Comparative Analysis Of Implementing Solar Energy In South Carolina, Paige Huntzberry, Jo Whitney Apr 2023

Comparative Analysis Of Implementing Solar Energy In South Carolina, Paige Huntzberry, Jo Whitney

Undergraduate Research Competition

Solar energy is becoming an increasingly popular method of providing energy to homes and businesses all over the world. Converting to solar energy is a huge step in reducing our carbon footprint, a driving force of global climate change. While this type of energy production provides an eco-friendly approach to power, requiring minimal maintenance and virtually no additional infrastructure, many are still opposed to the implementation due to financial reservations. The aim of this project is to design a solar array for installation on a building at the Medical University of South Carolina, providing a cost effective and practical approach …

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The Impact Of Prc Language Policies On Minority Languages Of China, Margaret Shoop Apr 2023

The Impact Of Prc Language Policies On Minority Languages Of China, Margaret Shoop

Undergraduate Research Competition

While language is often used as a tool to bring people together and celebrate differences, language can also be weaponized and used to suppress minority groups of people. There are over three hundred unique languages and dialects spoken in Mainland China, with Mandarin Chinese being the most widely spoken of the languages. Mandarin is the official state language of the People’s Republic of China (PRC), and it is also the primary language taught in schools across the country. Despite official Chinese policy of teaching Mandarin Chinese alongside local dialects, Mandarin is favored over minority languages. The unequal emphasis on Mandarin …

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Seasonal Fluctuation Of Nutrients That Lead To Microcystis Bloom Development In Wall Pond, Coastal Carolina University, Alyssa Antolak Apr 2023

Seasonal Fluctuation Of Nutrients That Lead To Microcystis Bloom Development In Wall Pond, Coastal Carolina University, Alyssa Antolak

Undergraduate Research Competition

The harmful cyanobacteria Microcystis globally dominates eutrophic freshwater systems. Eutrophication leading to nitrogen and phosphorus loading into aquatic systems is increasing bloom propagation and shifting diatom/dinoflagellate dominated systems to cyanobacteria dominated systems. Understanding seasonal variability and environmental parameters combined with nutrient loading will allow for better understanding of what factors are influencing Microcystis blooms. Biweekly plankton samples, environmental parameters, and nutrients were collected from Wall Pond from spring 2022-spring 2023. Nitrogen and phosphate limitation was examined by performing seasonal nutrient limitation experiments. Early results show that yearly plankton samples shifted from diatom dominated in the late summer-early fall to Microcystis …

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Silver Carp Hypophthalmichthys Molitrix Movements In The Lower Cumberland And Lower Tennessee River, Miranda Belanger Apr 2023

Silver Carp Hypophthalmichthys Molitrix Movements In The Lower Cumberland And Lower Tennessee River, Miranda Belanger

Scholars Week

Silver Carp Hypophthalmichthys molitrix are an invasive species making up a large portion of the fish biomass in the lower portions of the Tennessee River and the Cumberland River. This species is expanding its range throughout the upper portions of these rivers, beginning with Kentucky Lake and Lake Barkley. Silver Carp rarely spawn in Kentucky Lake and Lake Barkley, but they can enter these reservoirs through the lock chamber. Thus, the bottleneck created by lock chambers can be used to control expansion of invasive Silver Carp. Although Silver Carp movement patterns have been studied in other portions of the Tennessee …

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Margalefidinium Polykrikoides Cyst Resuspension In The Lafayette River, A Sub-Tributary Of The Chesapeake Bay, Gabrielle Greaney, Eduardo Perez Vega, Katherine Crider, Dreux Chappell, Kimberly Powell, Richard Hale, Peter Bernhardt, Margaret Mulholland Mar 2023

Margalefidinium Polykrikoides Cyst Resuspension In The Lafayette River, A Sub-Tributary Of The Chesapeake Bay, Gabrielle Greaney, Eduardo Perez Vega, Katherine Crider, Dreux Chappell, Kimberly Powell, Richard Hale, Peter Bernhardt, Margaret Mulholland

Undergraduate Research Symposium

Harmful Algal Blooms are a collection of algae in a body of water that can cause serious environmental issues and health problems in both people and aquatic organisms. Dinoflagellates are microscopic, unicellular, and eukaryotic organisms that are well known for forming harmful algal blooms because of eutrophication. Coastal Virginia suffers from HABs in the Chesapeake Bay and its tributaries. A common species of dinoflagellate, known as Margalefidinium polykrikoides exists in the Chesapeake Bay. The purpose of this study is to determine if sediment resuspension produced by wind generated surface gravity waves cause cysts (dinoflagellate resting stages) to be suspended into …

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Models For Predicting Maximum Potential Intensity Of Tropical Cyclones, Iftekhar Chowdhury, Gemechis Djira Feb 2023

Models For Predicting Maximum Potential Intensity Of Tropical Cyclones, Iftekhar Chowdhury, Gemechis Djira

SDSU Data Science Symposium

Tropical cyclones (TCs) are considered as extreme weather events, which has a low-pressure center, namely an eye, strong winds, and a spiral arrangement of thunderstorms that produces heavy rain, storm surges, and can cause severe destruction in coastal areas worldwide. Therefore, reliable forecasts of the maximum potential intensity (MPI) of TCs are critical to estimate the damages to properties, lives, and risk assessment. In this study, we explore and propose various regression models, to predict the potential intensity of TCs in the North Atlantic at 12, 24, 36, 48, 60, and 72- hour forecasting lead time. In addition, a popular …

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Flood Impacts And Risk Assessment Of Pleasant Creek In Capitol Reef National Park, Miranda Skinner, Suzanne Walther Aug 2022

Flood Impacts And Risk Assessment Of Pleasant Creek In Capitol Reef National Park, Miranda Skinner, Suzanne Walther

Research Month

Abstract: Capitol Reef National Park (CRNP) is located within Southern Utah. Flash floods are one of the main hazards CRNP experiences and because of the remote location of the park, numerous parameters, and sudden nature of flash floods it is extremely difficult to collect data, predict their occurrence, and create hazard maps. Pleasant Creek (PC) is a perennial stream that runs through CRNP and, due to the highly resistant sandstone of the Waterpocket Fold, experiences flash floods. We used 3D imagery and structure from motion to quantify the geomorphic changes of PC over a flood season using data collected in …

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Climate Assemblies: Lessons Learned And Results From Around The World And Washington State, Laura Berry, John Cambalik, Ed Chadd, Michael Chang, Derek Hoshiko, Brandon Letsinger Apr 2022

Climate Assemblies: Lessons Learned And Results From Around The World And Washington State, Laura Berry, John Cambalik, Ed Chadd, Michael Chang, Derek Hoshiko, Brandon Letsinger

Salish Sea Ecosystem Conference

Citizens’ assemblies are an increasingly widespread form of democratic engagement and solution-finding. Assemblies convened specifically to address the climate crisis have taken place around the world, including in Australia, Great Britain, Belgium, Poland, and France. France’s recent “Convention Citoyenne Pour Le Climat,” focused on reducing carbon emissions, led President Macron to pledge to adopt and fund 146 out of 149 policy recommendations. The Washington Climate Assembly (WA Climate Assembly) was initiated and funded by a group of volunteers, organized as People’s Voice on Climate. The nation’s first citizens’ assembly on this critical issue, the WA Climate Assembly brought together 77 …

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Opening Plenary, Scott Redman, Ginny Broadhurst, Cecilia Gobin, Patti Gobin, Christianne Wilhelmson, Dr. Kathryn L. Sobocinski, Dr. Isobel Pearsall Apr 2022

Opening Plenary, Scott Redman, Ginny Broadhurst, Cecilia Gobin, Patti Gobin, Christianne Wilhelmson, Dr. Kathryn L. Sobocinski, Dr. Isobel Pearsall

Salish Sea Ecosystem Conference

Welcome from Conference Organizers Scott Redman, Executive Chair Cecilia Gobin, Program Co-Chair Julie Watson, Program Co-Chair Fran Wilshusen, Program Co-Chair Christianne Wilhelmson, Program Co-Chair Ginny Broadhurst, Salish Sea Institute Coast Salish Welcome Cecilia Gobin, Northwest Indian Fisheries Commission Coast Salish Perspectives on the Last 150 years Patti Gobin, Tulalip Tribes Patti Gobin has over 25 years of Community Development experience with the Tulalip Tribes. Presently, she is with the Natural Resource Treaty Rights office working with state, local and federal agencies regarding those issues that impact the life ways of the Tulalip Tribes. In addition to her years of experience, …

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Investigating Temporal Groundwater Interactions Between A Barrier Island And High Marsh Environment, Dean Wrobel Apr 2022

Investigating Temporal Groundwater Interactions Between A Barrier Island And High Marsh Environment, Dean Wrobel

Undergraduate Research Competition

Saltmarsh hydrogeology can be characterized as exceptionally dynamic, with a diversity of pore water salinities, sediment porosities, and varied hydrologic inputs and outputs such as groundwater, precipitation, and tidal cycles. Of the studies done in these systems, much attention has been focused on the low marsh with regard to tidal pumping and the consequent horizontal pressure gradients which affect the subsurface hydraulic head. Perhaps, an equally dynamic boundary is expected at the groundwater interface of the barrier island and high marsh. Here, electrical resistivity tomograms were generated in a back-barrier, high-marsh site landward of Waties Island, South Carolina. Co-located transects …

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Microplastic Concentration Analysis Of The Atlantic Sand Fiddler Crab (Leptuca Pugilator) In Murrells Inlet, South Carolina, Caroline Conner Apr 2022

Microplastic Concentration Analysis Of The Atlantic Sand Fiddler Crab (Leptuca Pugilator) In Murrells Inlet, South Carolina, Caroline Conner

Undergraduate Research Competition

Microplastics pose a great threat to the natural environment, a threat not aided by their increasing abundance in marine waters. To assess how this is affecting our local area, I examined the microplastic concentration in fiddler crabs, a keystone species in intertidal zones, from two marsh systems in Murrells Inlet. The quantity, color, and type of microplastic found were recorded from each of the 120 crabs sampled. This information is revelant not only in monitoring the health of a species that plays a major role in nutrient recycling and prevention of anoxic conditions, but also as a caution to us. …

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What Lives On Offshore Artificial Reefs In South Carolina? An Analysis Of Epifaunal Reef Communities And How They Vary With Reef Age, Sydney Madden Apr 2022

What Lives On Offshore Artificial Reefs In South Carolina? An Analysis Of Epifaunal Reef Communities And How They Vary With Reef Age, Sydney Madden

Undergraduate Research Competition

Artificial reef structures have been deployed across the coast of South Carolina in an effort to increase fish habitat and provide other ecosystem services. There are approximately 45 artificial reef systems established by the South Carolina Department of Natural Resources (SCDNR) over several decades. The hard structure—frequently composed of concrete, old boats, or other structures—forms unique high relief hard-bottom habitat in the otherwise largely low relief coastal shelf. Currently, there is little published on the species composition of the epifaunal communities in this region, how much biomass they support, and how they develop over time. We studied two established artificial …

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Mapping The Impact Of A Trailway System On The Amount Of Trash Present Within Two Watersheds Of Lynchburg City, Virginia, Lillian Smith Apr 2022

Mapping The Impact Of A Trailway System On The Amount Of Trash Present Within Two Watersheds Of Lynchburg City, Virginia, Lillian Smith

Student Scholar Showcase

Transportation of trash debris within water systems is a prominent occurrence which has been linked to natural and artificial processes such as wind, rain, and littering. Recreational areas, such as activities along greenway trails, have been determined to be a source of debris found in waterways. This study examines whether the presence of an established recreational trail system limits trash accumulation in the entirety of a watershed. Trash data collected at Blackwater Creek, which contains an established trail system, was compared to trash data collected at Fishing Creek, containing a non-established trail system, to answer this hypothesis. A distance of …

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In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson Apr 2021

In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson

Student Research Symposium

In Silico Screening of Natural Compounds as Novel Drug Targets for The Treatment of Multiple MyelomaRousselene Larson1 2, Naveen Duhan1, and Rakesh Kaundal1 2 *1Department of Plants, Soils, and Climate, College of Agriculture and Applied Sciences; 2Bioinformatics Facility, Center for Integrated BioSystems; Utah State University, Logan, UT 84322 USA* corresponding author (e-mail: rkaundal@usu.edu)Telephone: +1 (435) 797-4117Fax: +1 (435) 797-2766Abstract: Multiple Myeloma (MM) is an incurable hematological malignancy cancer characterized by excessive clonal plasma cell proliferation in the bone marrow. In the United States, MM is the second most prevalent type of cancer that affects about 4 in 100,000 Americans. Toxicity …

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Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh Apr 2021

Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh

Student Research Symposium

Climatic change is one of the biggest threats to the ecosystem and biodiversity by enhancing environmental stresses. Environmental stresses such as biotic and abiotic stresses affect plant health and reduce crop production. The rhizosphere microbiome of a plant plays a significant role in a plant's defense against various biotic and abiotic stresses. In this study, we are investigating the microbiome diversity of bulk soil, rhizosphere, and endosphere of Ceanothus velutinus, snowbrush. Ceanothus is an evergreen native plant that is usually found in dry areas and thrives well in harsh conditions. The snowbrush samples were collected from different locations 1920m, 1950m, …

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Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel Apr 2021

Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel

Student Research Symposium

Nighttime irrigation is a widespread strategy to conserve water, as it reduces wind drift and evaporation loss (WDEL). However, daytime sprinkler irrigation may also conserve water by lowering the temperature and increasing the humidity of crop microclimates, thereby reducing evapotranspiration (ET). Therefore, the objectives of this study include: 1) quantify whether a water savings exists between day and night irrigation with a water balance approach, 2) analyze the microclimate effects by irrigation timing to determine any changes to WDEL and evaporative demand, and 3) assess the quality and yield response of two urban crops. In 2019-21, we established 12 field …

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Transgenic Expression Of Prunus Persica Salt Overly Sensitive 2 (Ppsos2) In Atsos2 Mutant Imparts Salt Tolerance In Arabidopsis, Vishal Singh Apr 2021

Transgenic Expression Of Prunus Persica Salt Overly Sensitive 2 (Ppsos2) In Atsos2 Mutant Imparts Salt Tolerance In Arabidopsis, Vishal Singh

Student Research Symposium

Salinity is one of the major environmental stresses that affect crop growth and productivity. Almond crop has a great potential for Utah as a cash crop and salinity is one of the stresses affecting its growth and yield. Although almond trees are sensitive to salt stress, salinity-tolerant rootstocks can play a significant role in sustaining crop production in semiarid areas. Salinity tolerance has a complex mechanism with many genes acting in different pathways. Understanding the role of potential candidate genes is an important aspect of genomics assisted improvement of stress tolerance. In this study, functional complementation of the Prunus persica …

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Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh Apr 2021

Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh

Student Research Symposium

Maize is the largest crop in the world in terms of production. Utah, maize is a potential fodder crop. With increasing climate change, soil salinity is also increasing worldwide. Soil salinity is very detrimental to plants' growth and development and crop production. For a fodder crop, plant biomass is an important trait, and maize biomass is adversely affected by salinity stress, especially at the seedling stage. A Selection of salt-tolerant breeding material is a time-consuming process and its complexity is further increased by significant heterogeneity in soil salinity under field based evaluation. Genomic prediction is an emerging tool that can …

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Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh Apr 2021

Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh

Student Research Symposium

Climatic change-induced environmental stresses affect crop production. Drought is such a stress which affect crop production and landscaping adversely. Native plants are great for low water use landscaping and can adapt to the natural environment. USU Center for Water-Efficient Landscaping has released a list of native plants that can be used for this purpose. This study focuses on a native plant Ceanothus velutinus (snowbrush) which is an evergreen plant native to western North America. It thrives well in harsh conditions and can act as ornamental plant in low water use landscaping but is difficult to propagate under landscape conditions. Here, …

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Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan Apr 2021

Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan

Student Research Symposium

Abstract: Nitrification is an important microbial two-step transformation in the global nitrogen cycle, as it is the only natural process that produces nitrate within a system. The functional annotation of nitrification-related enzymes has a broad range of applications in metagenomics, agriculture, industrial biotechnology, etc. The time and resources needed for determining the function of enzymes experimentally are restrictively costly. Therefore, an accurate genome-scale computational prediction of the nitrification-related enzymes has become much more important.In this study, we developed an alignment-free computational approach to determine the nitrification-related enzymes from the sequence itself. We propose deepNEC, a novel end-to-end feature selection and …

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Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan Apr 2021

Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan

Student Research Symposium

Abstract: With the advent of Next-Generation Sequencing (NGS) technologies, numerous data is being generated every day, however, streamlined analysis remains a big hurdle to efficiently use the technology. A large number of algorithms, statistical methods, and software tools have been developed in recent years to perform the individual analysis steps of various NGS applications. Some NGS applications data analysis procedures are therefore very complex, requiring several program tools to be downloaded for their various processing steps. There is a significant room for the development of scalable computing environments that link the individual software components to automated workflows to efficiently and …

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Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller Apr 2021

Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller

Student Research Symposium

As agriculture intensifies, the world faces a dual challenge of increasing food production while reducing impacts of excess reactive nitrogen (N) in the environment. A field study examining different N sources in corn silage under semi-arid conditions was conducted at the Greenville farm in northern Utah (41°45’ N, 1111°48’52 W) since 2012. The experimental design is a randomized complete block design with four blocks and four treatments: control (no nitrogen), low ammonium sulfate (AS 112 kg N/ha), high ammonium sulfate (AS 224 kg N/ha), and steer manure compost (224 kg total N/ha). We examined yield, nitrogen use efficiency (NUE), and …

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