Physical Sciences and Mathematics Commons^™

Investigating Channel Narrowing And Nonnative Vegetation Encroachment In Three Dryland Rivers, Casey Pennock, Benjamin Miller, Phaedra Budy

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Water development and the proliferation of invasive riparian vegetation has led to widespread habitat loss and simplification of rivers in the western United States, contributing to the imperilment of native fishes. Here, we quantify channel narrowing and vegetation encroachment, which are conspicuous indicators of riverine habitat degradation, along approximately 400 km of three dryland tributaries of the upper Colorado River. To accomplish this, we conducted a comparative analysis of aerial photographs from historical (1930s) and contemporary (2010s or 2020s) time periods and utilized Light Detection and Ranging (LiDAR) data and Object-Based Image Analysis (OBIA) to determine contemporary canopy cover of …

Ocean Temperatures Do Not Account For A Record-Setting Winter In The U.S. West, Matthew D. Laplante, Liping Deng, Luthiene Dalanhese, Shih-Yu Wang

Journalism and Communication Faculty Publications

The record-setting winter of 2022–2023 came as an answer to both figurative and literal prayers for political leaders, policy makers, and water managers reliant on snowpacks in the Upper Colorado River Basin, a vital source of water for tens of millions of people across the Western United States. But this “drought-busting” winter was not well-predicted, in part because while interannual patterns of tropical ocean temperatures have a well-known relationship to precipitation patterns across much of the American West, the Upper Colorado is part of a liminal region where these connections tend to be comparatively weak. Using historical sea surface temperature …

Ecology And Management Of Dyer's Woad (Isatis Tinctoria) In Northern Utah, Erin Marie Hettinger

All Graduate Theses and Dissertations, Fall 2023 to Present

Dyer’s woad (Isatis tinctoria L.) is a non-native forb that continues to threaten natural areas throughout Northern Utah and much of the Intermountain West. Once introduced, dyer’s woad can become extremely invasive, decreasing forage quality, and displacing native species. While dyer’s woad is found throughout much of Northern Utah, its range in other states remains limited. If promptly managed, control success in these areas will be much higher and populations may be kept at bay before ecological damage becomes severe.

This project tested the ability of dyer’s woad seedlings to compete with common rangeland grasslands at varied densities as …

Reducing Inputs And Adding Value To Turfgrass Systems Through Clover Inclusion And Plant Growth-Promoting Rhizobacteria Applications, Paige E. Boyle

All Graduate Theses and Dissertations, Fall 2023 to Present

Recently, the US has seen an expansion in the amount of turfgrass land cover (lawns, parks, roadsides, sports fields, and golf courses), as well as an interest in reducing fertilizer, water, and pesticide use in these grass systems. To help maintain quality and function while reducing resource inputs, two promising approaches have emerged: planting clover into lawns and applying plant growth-promoting rhizobacteria.

White clover and grass mixtures have been studied for their ability to cut down on fertilizer usage and provide a uniform, dark green lawn, but other clover types have not been as widely studied and may provide similar …

The Irrigation Efficiency Trap: Rational Farm-Scale Decisions Can Lead To Poor Hydrologic Outcomes At The Basin Scale, Christina N. Morrisett, Robert W. Van Kirk, London O. Bernier, Andrea L. Holt, Chloe B. Perel, Sarah E. Null

Watershed Sciences Faculty Publications

Agricultural irrigation practices have changed through time as technology has enabled more efficient conveyance and application. In some agricultural regions, irrigation can contribute to incidental aquifer recharge important for groundwater return flows to streams. The Henrys Fork Snake River, Idaho (United States) overlies a portion of the Eastern Snake Plain Aquifer, where irrigated agriculture has occurred for over a century. Using irrigator interviews, aerial and satellite imagery, and statistical streamflow analysis, we document the impact of farm-scale decisions on basin-scale hydrology. Motivated to improve economic efficiency, irrigators began converting from surface to center-pivot sprinkler irrigation in the 1950s, with rapid …

Nalidarturbopauseshear, Titus Yuan

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The USU Na lidar has been upgraded to be able to measure temperature and winds in the lower thermosphere up to ~ 115 km routinely. The new capability, coupled with the existing nightglow instruments at USU, enables the investigation of the extreme large wind and shears in this region and their correlation to the atmospheric gravity waves activities in the upper mesosphere.

Hydroclimate Effects On Great Salt Lake Decline Since 1980, Siiri Joy Bigalke

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

As a terminal basin lake, the Great Salt Lake (GSL) is known to act as a barometer for low frequency climate variability for the Western United States. As thus, there are naturally occurring large changes to GSL elevation levels that vary on time scales from years to decades. However, amongst these naturally occurring interannual changes there has been a significant declining trend in the elevation levels since a string of anomalous pluvial years in the early 1980s. In the summer of 2022, the Great Salt Lake reached its lowest levels in recorded history, which coincided with a two-decades long regional …

Evapotranspiration And Energy Balance Of Irrigated Urban Turfgrass, Matthew D. Miksch

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Water usage for irrigation is a big consumer of water resources in urban areas in Utah and other parts of the Intermountain Region of the Western United States. As populations continue to increase in these states, it is important to understand how much water is being used by urban landscapes in order to plan and manage future water resources. Evapotranspiration (ET), or the amount of water leaving a surface over a certain timeframe due to both transpiration from plants and evaporation from the soil, is a key variable in understanding how much water urban landscapes are really using to grow …

From Mountain Streams To Urban Rivers: An Assessment Of Microplastic Sources And Characteristics, Macy Gustavus

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Plastic products are produced and discarded at an alarming rate. Bottles, bags, toys, and clothing break down into tiny plastic pieces called microplastics, ranging in size from an eraser on the top of a pencil to smaller in size than a red blood cell. Microplastics are becoming so common in the environment that they travel in the atmosphere, rivers, and ocean currents in ways that are similar to other types of Earth Systems Cycles (i.e., the water cycle). In this study, we explored microplastic sources and sinks in a freshwater river system and how seasonal changes in discharge affect how …

Acoustic Waves In The Upper Atmosphere, Geoffrey Blayne Schulthess

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Atmospheric waves can be generated by tropospheric sources such as earthquakes and explosions, causing significant disturbances in the upper atmosphere and ionosphere, where radio wave communications take place. For this analysis, they will be separated into two sub-groups called acoustic waves and gravity waves. Because each of these waves have unique frequency ranges, they can be observed and measured in order to determine their source type and location. Past studies attempted to build the connections between these waves with severe storms and earthquakes, which have improved our understanding of their complexity. Because of the complex nature of these waves, simplified …

Precipitation Is A Strong Predictor Of Airborne Ammonia Levels., Bridger Jorgensen, Casey Olson, Connor Snow

Research on Capitol Hill

USU senior Connor has lived in the Uintah Basin all his life and studies kinesiology. Senior Casey, a Cache Valley native, studies climate science and works at the Utah Climate Center. Junior Bridger, also of Cache Valley, studies nutrition science. They led and funded this project through a student grant. Casey was alarmed by the ammonia data he was collecting at the Climate Center. “I immediately began to wonder how this issue would evolve over the coming decades.” The three teamed up to take a look at how Logan’s record-breaking amount of ammonia in our air is impacting those who …

Climate Change Impacts On Atmospheric Ammonia And Implications For Human Health, Casey Olson, Connor Snow, Bridger Jorgensen

Fall Student Research Symposium 2021

According to national data Cache Valley has the highest concentrations of atmospheric ammonia in the nation. This study aims to answer the questions of whether climate variables and events such as precipitation, averaged winds, geopotential height, and teleconnections can be used to predict the behavior of pollutants and how human biology is potentially affected. Data from the Utah Climate Center shows that the 3rd yearly quartile has the highest levels of airborne ammonia due to the high levels of fertilizer use and livestock emissions in the farming industry in Cache Valley. After data analysis, there seems to be a connection …

Remote Ocean Forcing On Interannual-To-Decadal Climate Variability Through Inter-Basin Interactions, Zachary F. Johnson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This dissertation explores the connection between ocean basins through the atmosphere by employing observational data analyses and a climate modeling approach. Sea surface temperature changes in the tropical Pacific, known as the El Niño Southern Oscillation, can influence worldwide weather and sea surface temperatures in other ocean basins. For instance, tropical Pacific sea surface temperatures can impact the Atlantic and Indian Oceans through airflow changes along the equator. However, Atlantic and Indian Ocean sea surface temperature changes can also influence the tropical Pacific through similar processes. Therefore, it is challenging to identify the mechanisms of these remote connections between ocean …

In Silico Screeing Of Natural Compounds As Novel Drug Targets For Treatment Of Multiple Myeloma, Rousselene Larson

Student Research Symposium

In Silico Screening of Natural Compounds as Novel Drug Targets for The Treatment of Multiple MyelomaRousselene Larson1 2, Naveen Duhan1, and Rakesh Kaundal1 2 *1Department of Plants, Soils, and Climate, College of Agriculture and Applied Sciences; 2Bioinformatics Facility, Center for Integrated BioSystems; Utah State University, Logan, UT 84322 USA* corresponding author (e-mail: rkaundal@usu.edu)Telephone: +1 (435) 797-4117Fax: +1 (435) 797-2766Abstract: Multiple Myeloma (MM) is an incurable hematological malignancy cancer characterized by excessive clonal plasma cell proliferation in the bone marrow. In the United States, MM is the second most prevalent type of cancer that affects about 4 in 100,000 Americans. Toxicity …

Comparative Study Of The Microbiome Of The Native Plant Ceanothus Velutinus (Snowbrush) From Different Locations And Greenhouse Studies, Jyothsna Ganesh

Student Research Symposium

Climatic change is one of the biggest threats to the ecosystem and biodiversity by enhancing environmental stresses. Environmental stresses such as biotic and abiotic stresses affect plant health and reduce crop production. The rhizosphere microbiome of a plant plays a significant role in a plant's defense against various biotic and abiotic stresses. In this study, we are investigating the microbiome diversity of bulk soil, rhizosphere, and endosphere of Ceanothus velutinus, snowbrush. Ceanothus is an evergreen native plant that is usually found in dry areas and thrives well in harsh conditions. The snowbrush samples were collected from different locations 1920m, 1950m, …

Day Versus Night Irrigation Loss From Sprinkler Irrigation Of Urban Crops, Samikshya Pyakurel

Student Research Symposium

Nighttime irrigation is a widespread strategy to conserve water, as it reduces wind drift and evaporation loss (WDEL). However, daytime sprinkler irrigation may also conserve water by lowering the temperature and increasing the humidity of crop microclimates, thereby reducing evapotranspiration (ET). Therefore, the objectives of this study include: 1) quantify whether a water savings exists between day and night irrigation with a water balance approach, 2) analyze the microclimate effects by irrigation timing to determine any changes to WDEL and evaporative demand, and 3) assess the quality and yield response of two urban crops. In 2019-21, we established 12 field …

Transgenic Expression Of Prunus Persica Salt Overly Sensitive 2 (Ppsos2) In Atsos2 Mutant Imparts Salt Tolerance In Arabidopsis, Vishal Singh

Student Research Symposium

Salinity is one of the major environmental stresses that affect crop growth and productivity. Almond crop has a great potential for Utah as a cash crop and salinity is one of the stresses affecting its growth and yield. Although almond trees are sensitive to salt stress, salinity-tolerant rootstocks can play a significant role in sustaining crop production in semiarid areas. Salinity tolerance has a complex mechanism with many genes acting in different pathways. Understanding the role of potential candidate genes is an important aspect of genomics assisted improvement of stress tolerance. In this study, functional complementation of the Prunus persica …

Genomic Prediction Of Salinity Stress Tolerance In Maize (Zea Mays L.), Vishal Singh

Student Research Symposium

Maize is the largest crop in the world in terms of production. Utah, maize is a potential fodder crop. With increasing climate change, soil salinity is also increasing worldwide. Soil salinity is very detrimental to plants' growth and development and crop production. For a fodder crop, plant biomass is an important trait, and maize biomass is adversely affected by salinity stress, especially at the seedling stage. A Selection of salt-tolerant breeding material is a time-consuming process and its complexity is further increased by significant heterogeneity in soil salinity under field based evaluation. Genomic prediction is an emerging tool that can …

Microbial Community Of The Rhizosphere Of Ceanothus Velutinus Improves The Plant's Growth And Development Under Greenhouse Conditions, Jyothsna Ganesh

Student Research Symposium

Climatic change-induced environmental stresses affect crop production. Drought is such a stress which affect crop production and landscaping adversely. Native plants are great for low water use landscaping and can adapt to the natural environment. USU Center for Water-Efficient Landscaping has released a list of native plants that can be used for this purpose. This study focuses on a native plant Ceanothus velutinus (snowbrush) which is an evergreen plant native to western North America. It thrives well in harsh conditions and can act as ornamental plant in low water use landscaping but is difficult to propagate under landscape conditions. Here, …

Deepnec: A Novel Alignment-Free Tool For The Characterization Of Nitrification-Related Enzymes Using Deep Learning, A Step Towards Comprehensive Understanding Of The Nitrogen Cycle, Naveen Duhan

Student Research Symposium

Abstract: Nitrification is an important microbial two-step transformation in the global nitrogen cycle, as it is the only natural process that produces nitrate within a system. The functional annotation of nitrification-related enzymes has a broad range of applications in metagenomics, agriculture, industrial biotechnology, etc. The time and resources needed for determining the function of enzymes experimentally are restrictively costly. Therefore, an accurate genome-scale computational prediction of the nitrification-related enzymes has become much more important.In this study, we developed an alignment-free computational approach to determine the nitrification-related enzymes from the sequence itself. We propose deepNEC, a novel end-to-end feature selection and …

Pyseqrna: An Automated Python Package For Advanced Rna Sequencing Data Analysis And Annotation, Naveen Duhan

Student Research Symposium

Abstract: With the advent of Next-Generation Sequencing (NGS) technologies, numerous data is being generated every day, however, streamlined analysis remains a big hurdle to efficiently use the technology. A large number of algorithms, statistical methods, and software tools have been developed in recent years to perform the individual analysis steps of various NGS applications. Some NGS applications data analysis procedures are therefore very complex, requiring several program tools to be downloaded for their various processing steps. There is a significant room for the development of scalable computing environments that link the individual software components to automated workflows to efficiently and …

Nitrogen Use Efficiency And Soil Bioavailable Nitrogen In Corn Silage Production In A Semi-Arid Environment, Phearen Miller

Student Research Symposium

As agriculture intensifies, the world faces a dual challenge of increasing food production while reducing impacts of excess reactive nitrogen (N) in the environment. A field study examining different N sources in corn silage under semi-arid conditions was conducted at the Greenville farm in northern Utah (41°45’ N, 1111°48’52 W) since 2012. The experimental design is a randomized complete block design with four blocks and four treatments: control (no nitrogen), low ammonium sulfate (AS 112 kg N/ha), high ammonium sulfate (AS 224 kg N/ha), and steer manure compost (224 kg total N/ha). We examined yield, nitrogen use efficiency (NUE), and …

Investigating Mesospheric Mountain Waves And Oh Temperature Dynamics Over Chile, David G. Soward

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Atmospheric gravity waves (GW) occur throughout the atmosphere, propagating from copious sources in the lower atmosphere into the upper neutral atmosphere and ionosphere. There are many sources of GW, most of them are associated with strong weather disturbances which are highly transient in nature. Another source of GW are strong winds blowing over prominent mountains that generate mountain waves (MW.) An important property of all of these waves is that they propagate upwards, carrying large amounts of energy and momentum which can be deposited in the upper atmosphere as the waves saturate and break. The Andes Lidar Observatory (ALO) was …

A Stratospheric Approach To Diagnose The North American Winter Dipole, Henrik Panosyan

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

It has been well established in the literature that the stratosphere is dynamically coupled with the troposphere during boreal winter. The North American Winter Dipole is comprised of an upper-tropospheric contrast between a ridge over western North America, and a trough over eastern North America. The variance of this circulation regime has increased in recent years, with its amplified states being associated with extremes ranging from drought and floods, to extreme cold air outbreaks. This study explores the stratospheric link to this extreme weather regime, in the hopes of ultimately improving the predictability of this regime on intraseasonal-to-seasonal timescales. We …

Pacific Decadal Oscillation Remotely Forced By The Equatorial Pacific And The Atlantic Oceans, Zachary F. Johnson, Yoshimitsu Chikamoto, Shih-Yu Simon Wang, Michael J. Mcphaden, Takashi Mochizuki

Plants, Soils, and Climate Faculty Publications

The Pacific Decadal Oscillation (PDO), the leading mode of Pacific decadal sea surface temperature variability, arises mainly from combinations of regional air-sea interaction within the North Pacific Ocean and remote forcing, such as from the tropical Pacific and the Atlantic. Because of such a combination of mechanisms, a question remains as to how much PDO variability originates from these regions. To better understand PDO variability, the equatorial Pacific and the Atlantic impacts on the PDO are examined using several 3-dimensional partial ocean data assimilation experiments conducted with two global climate models: the CESM1.0 and MIROC3.2m. In these partial assimilation experiments, …

Beavers Alter Stream Macroinvertebrate Communities In Northeastern Utah, Susan E. Washko, Brett B. Roper, Trisha Brooke Atwood

Watershed Sciences Faculty Publications

1. Understanding changes in macroinvertebrate communities is important because they play a large role in stream ecosystem functioning, and they are an important food resource for fish. Beaver‐induced changes to stream morphology could alter macroinvertebrate communities, which in turn could affect food webs and ecosystem function. However, studies investigating the effects of North American beaver activities on macroinvertebrates are rare in the inter‐mountain west, an area with high potential for beaver‐assisted restoration.
2. The aim of this study was to quantify differences in the macroinvertebrate community between unaltered segments of streams and within beaver ponds in north‐eastern Utah, U.S.A. We assessed macroinvertebrate …

Change In The Leading Mode Of North America's Wintertime Stationary Eddies, Yu-Tang Chien

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Extreme winter weather events in North America have become more frequent and increasingly destructive. This phenomenon was linked to a jet stream pattern that generates abnormally warm conditions in the west and cold conditions in the east, referred to as the North American Winter Dipole. Studies have shown that the Dipole may have amplified and this amplification could be linked to global warming. By analyzing the atmospheric and oceanic data worldwide, the wintertime circulation in the Northern Hemisphere shows signs of a persistent change after the 1980s. In the first part of this study, we examine how the ocean has …

Intermittent Turbulent Exchanges And Their Role In Vineyard Evapotranspiration, Sebastian Alexander Los

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Vineyards are often grown in semi-arid climates, such as California’s central valley, where water resources can be limited. Summer weather conditions result in high water use by these plants. For wine grapes, a high-value commodity, there are known benefits to fruit quality in irrigating grapevines with slightly below optimum for the plant. Growers would like to be able to precisely irrigate without overusing water or overstressing the vines. This calls for improving ways to monitor vineyard water use by estimating the combined soil evaporation and plant transpiration known as evapotranspiration (ET). A computer model developed by the USDA called the …

The Impact Of Energetic Neutral Particles Raining Down On The Thermosphere Due To Charge Exchange Reactions In The Upper Ionosphere And Polar Wind, Larry Gardner

Funded Research Records

No abstract provided.

Tdim Ionospheric Model Tec Maps Of The High-Latitude Northern Hemisphere, Used In The Paper Titled "Hemispherical Shifted Symmetry In Polar Cap F-Region Patch Occurrence: A Survey Of Gps Tec Data From 2015 To 2018", Michael David, Jan J. Sojka

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TDIM ionospheric model was run for the year 2018 at 10-day intervals and 2-hr intervals in UT.